RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 RPL18AQ02543 176 aaKnown RBP6.1□□□□□ -1.43
HPS4-206ENST00000439453 CYSTM1Q9H1C7 97 aa6.1□□□□□ -1.43
HPS4-206ENST00000439453 FAM19A3Q7Z5A8 133 aa6.09□□□□□ -1.43
HPS4-206ENST00000439453 TRAV13-2A0A0B4J235 113 aa6.09□□□□□ -1.43
HPS4-206ENST00000439453 MEGF8Q7Z7M0 2845 aa6.09□□□□□ -1.43
HPS4-206ENST00000439453 NBEAL1Q6ZS30 2694 aa6.09□□□□□ -1.43
HPS4-206ENST00000439453 FBN3Q75N90 2809 aa6.09□□□□□ -1.43
HPS4-206ENST00000439453 PF4P02776 101 aa6.08□□□□□ -1.44
HPS4-206ENST00000439453 DEFB131AP59861 70 aa6.08□□□□□ -1.44
HPS4-206ENST00000439453 F5H768 121 aa6.08□□□□□ -1.44
HPS4-206ENST00000439453 C9orf129Q5T035 196 aaKnown RBP6.08□□□□□ -1.44
HPS4-206ENST00000439453 Q6JHZ5 121 aa6.08□□□□□ -1.44
HPS4-206ENST00000439453 C14orf132Q9NPU4 83 aa6.08□□□□□ -1.44
HPS4-206ENST00000439453 OVOL2Q9BRP0 275 aa6.08□□□□□ -1.44
HPS4-206ENST00000439453 LINC00337Q8N6G1 96 aa6.07□□□□□ -1.44
HPS4-206ENST00000439453 C11orf72Q8NBR9 251 aa6.07□□□□□ -1.44
HPS4-206ENST00000439453 A0A087WYN8 130 aa6.07□□□□□ -1.44
HPS4-206ENST00000439453 A8MTW9 85 aa6.07□□□□□ -1.44
HPS4-206ENST00000439453 S100A7L2Q5SY68 101 aa6.07□□□□□ -1.44
HPS4-206ENST00000439453 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
HPS4-206ENST00000439453 LINC00846Q9NV44 126 aa6.07□□□□□ -1.44
HPS4-206ENST00000439453 TMEM258P61165 79 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 IGKV2-28A0A075B6P5 120 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 IGKV2D-28P01615 120 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 KIR2DL5BQ8NHK3 375 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 DYNLRB2Q8TF09 96 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 DPH3Q96FX2 82 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 UPK3BQ9BT76 320 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 C11orf68Q9H3H3 251 aaKnown RBP6.06□□□□□ -1.44
HPS4-206ENST00000439453 SMIM11BQ8TCY0 68 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 OBSCN-AS1Q96MR7 158 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 A0A087WVE0 104 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 C18orf65Q6ZTR6 163 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 MIR7-3HGQ8N6C7 128 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 TMEM243Q9BU79 118 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 SND1-IT1Q9HBX3 110 aa6.06□□□□□ -1.44
HPS4-206ENST00000439453 PFN2P35080 140 aa6.05□□□□□ -1.44
HPS4-206ENST00000439453 LINC01561Q8N1V8 128 aa6.05□□□□□ -1.44
HPS4-206ENST00000439453 C11orf44Q8N8P7 122 aa6.05□□□□□ -1.44
HPS4-206ENST00000439453 CDC42SE2Q9NRR3 84 aa6.05□□□□□ -1.44
HPS4-206ENST00000439453 USP17L23D6RBM5 183 aa6.04□□□□□ -1.44
HPS4-206ENST00000439453 H0YGX0 51 aa6.04□□□□□ -1.44
HPS4-206ENST00000439453 NTM-AS1Q6ZSK4 140 aa6.04□□□□□ -1.44
HPS4-206ENST00000439453 HAMPP81172 84 aa6.04□□□□□ -1.44
HPS4-206ENST00000439453 UBL5Q9BZL1 73 aa6.04□□□□□ -1.44
HPS4-206ENST00000439453 RBM3P98179 157 aaKnown RBP6.04□□□□□ -1.44
HPS4-206ENST00000439453 DSCR8Q96T75 97 aa6.04□□□□□ -1.44
HPS4-206ENST00000439453 NCR3O14931 201 aa6.03□□□□□ -1.44
HPS4-206ENST00000439453 HRCT1Q6UXD1 115 aa6.03□□□□□ -1.44
HPS4-206ENST00000439453 LAMTOR3Q9UHA4 124 aa6.03□□□□□ -1.44
HPS4-206ENST00000439453 LECT2O14960 151 aa6.03□□□□□ -1.44
HPS4-206ENST00000439453 RPL36AP83881 106 aaKnown RBP6.03□□□□□ -1.44
HPS4-206ENST00000439453 COX7B2Q8TF08 81 aa6.03□□□□□ -1.44
HPS4-206ENST00000439453 RPL36ALQ969Q0 106 aaKnown RBP6.03□□□□□ -1.44
HPS4-206ENST00000439453 OXTP01178 125 aa6.03□□□□□ -1.44
HPS4-206ENST00000439453 INSP01308 110 aa6.02□□□□□ -1.45
HPS4-206ENST00000439453 CCL18P55774 89 aa6.02□□□□□ -1.45
HPS4-206ENST00000439453 C20orf197Q8N268 126 aa6.02□□□□□ -1.45
HPS4-206ENST00000439453 DNAH9Q9NYC9 4486 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 TRGV1A0A0A0MS02 117 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 K7EQD1 137 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 WIPF1O43516 503 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 SLPIP03973 132 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 SLURP1P55000 103 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 PKIGQ9Y2B9 76 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 TRAV23DV6A0A075B6W5 121 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 GHRHP01286 108 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 C6orf226Q5I0X4 101 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 MRAPQ8TCY5 172 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 UBE2E2Q96LR5 201 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 MAP6D1Q9H9H5 199 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 TRGV2A0A075B6R0 118 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 TRBV10-1A0A0K0K1A3 114 aa6.01□□□□□ -1.45
HPS4-206ENST00000439453 CCKP06307 115 aa6□□□□□ -1.45
HPS4-206ENST00000439453 DEFB136Q30KP8 78 aa6□□□□□ -1.45
HPS4-206ENST00000439453 XCL2Q9UBD3 114 aa6□□□□□ -1.45
HPS4-206ENST00000439453 MGAM2Q2M2H8 2515 aa6□□□□□ -1.45
HPS4-206ENST00000439453 A0A1W2PRX2 142 aa5.99□□□□□ -1.45
HPS4-206ENST00000439453 ORMDL1Q9P0S3 153 aa5.99□□□□□ -1.45
HPS4-206ENST00000439453 C4orf26Q17RF5 130 aa5.99□□□□□ -1.45
HPS4-206ENST00000439453 SS18Q15532 418 aa5.99□□□□□ -1.45
HPS4-206ENST00000439453 IBA57-AS1B1ANH7 110 aa5.98□□□□□ -1.45
HPS4-206ENST00000439453 FHL2Q14192 279 aa5.98□□□□□ -1.45
HPS4-206ENST00000439453 LINC00482Q8N8I6 264 aa5.98□□□□□ -1.45
HPS4-206ENST00000439453 IL17DQ8TAD2 202 aa5.98□□□□□ -1.45
HPS4-206ENST00000439453 COL7A1Q02388 2944 aa5.98□□□□□ -1.45
HPS4-206ENST00000439453 Q6ZTI0 123 aa5.98□□□□□ -1.45
HPS4-206ENST00000439453 Q5XG85 94 aa5.98□□□□□ -1.45
HPS4-206ENST00000439453 C4orf3Q8WVX3 66 aa5.98□□□□□ -1.45
HPS4-206ENST00000439453 TRAV25A0A0B4J276 109 aa5.97□□□□□ -1.45
HPS4-206ENST00000439453 BRK1Q8WUW1 75 aa5.97□□□□□ -1.45
HPS4-206ENST00000439453 C1orf158Q8N1D5 194 aa5.97□□□□□ -1.45
HPS4-206ENST00000439453 WFDC9Q8NEX5 89 aa5.97□□□□□ -1.45
HPS4-206ENST00000439453 TRBV6-4A0A1B0GX49 114 aa5.96□□□□□ -1.45
HPS4-206ENST00000439453 NOTCH1P46531 2555 aa5.96□□□□□ -1.45
HPS4-206ENST00000439453 ATP5EP2Q5VTU8 51 aa5.96□□□□□ -1.45
HPS4-206ENST00000439453 A0A0U1RQV1 116 aa5.96□□□□□ -1.46
HPS4-206ENST00000439453 NDUFC2-KCTD14E9PQ53 114 aa5.96□□□□□ -1.46
HPS4-206ENST00000439453 NDUFC2O95298 119 aa5.96□□□□□ -1.46
HPS4-206ENST00000439453 KPRPQ5T749 579 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms