RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 CCKP06307 115 aa11.32□□□□□ -0.6
DHFR-201ENST00000439211 Q6ZSN1 163 aa11.32□□□□□ -0.6
DHFR-201ENST00000439211 CFAP46Q8IYW2 2715 aa11.31□□□□□ -0.6
DHFR-201ENST00000439211 H7BZZ5 65 aa11.31□□□□□ -0.6
DHFR-201ENST00000439211 MAP6D1Q9H9H5 199 aa11.31□□□□□ -0.6
DHFR-201ENST00000439211 ZNF702PQ9H963 129 aa11.3□□□□□ -0.6
DHFR-201ENST00000439211 TMEM89A2RUT3 159 aa11.3□□□□□ -0.6
DHFR-201ENST00000439211 COX6A2Q02221 97 aa11.29□□□□□ -0.6
DHFR-201ENST00000439211 PMAIP1Q13794 54 aa11.29□□□□□ -0.6
DHFR-201ENST00000439211 DAD1P61803 113 aa11.29□□□□□ -0.6
DHFR-201ENST00000439211 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
DHFR-201ENST00000439211 TRGV4A0A0C4DH28 118 aa11.29□□□□□ -0.6
DHFR-201ENST00000439211 SCXQ7RTU7 201 aa11.28□□□□□ -0.6
DHFR-201ENST00000439211 LINC00337Q8N6G1 96 aa11.28□□□□□ -0.6
DHFR-201ENST00000439211 LINC00482Q8N8I6 264 aa11.28□□□□□ -0.6
DHFR-201ENST00000439211 UTP20O75691 2785 aaKnown RBP11.28□□□□□ -0.6
DHFR-201ENST00000439211 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
DHFR-201ENST00000439211 Q6YL49 198 aa11.28□□□□□ -0.6
DHFR-201ENST00000439211 CHD6Q8TD26 2715 aa11.26□□□□□ -0.61
DHFR-201ENST00000439211 FP248Q71RG6 208 aaPredicted RBP11.26□□□□□ -0.61
DHFR-201ENST00000439211 CUBNO60494 3623 aa11.26□□□□□ -0.61
DHFR-201ENST00000439211 Q6ZTI0 123 aa11.26□□□□□ -0.61
DHFR-201ENST00000439211 LRCOL1A6NCL2 159 aa11.26□□□□□ -0.61
DHFR-201ENST00000439211 TEX15Q9BXT5 2789 aa11.26□□□□□ -0.61
DHFR-201ENST00000439211 MIFP14174 115 aa11.25□□□□□ -0.61
DHFR-201ENST00000439211 IGSF10Q6WRI0 2623 aa11.25□□□□□ -0.61
DHFR-201ENST00000439211 NDUFC1O43677 76 aa11.25□□□□□ -0.61
DHFR-201ENST00000439211 KRTAP10-9P60411 292 aa11.25□□□□□ -0.61
DHFR-201ENST00000439211 DEFB114Q30KQ6 69 aa11.24□□□□□ -0.61
DHFR-201ENST00000439211 COX7B2Q8TF08 81 aa11.24□□□□□ -0.61
DHFR-201ENST00000439211 CHCHD7Q9BUK0 85 aa11.24□□□□□ -0.61
DHFR-201ENST00000439211 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
DHFR-201ENST00000439211 PRB2P02812 416 aaPredicted RBP11.23□□□□□ -0.61
DHFR-201ENST00000439211 IGHV4-31P0DP07 118 aa11.23□□□□□ -0.61
DHFR-201ENST00000439211 C6orf226Q5I0X4 101 aa11.23□□□□□ -0.61
DHFR-201ENST00000439211 LINC00242Q5T6M2 205 aa11.23□□□□□ -0.61
DHFR-201ENST00000439211 DEFB130BP0DP73 79 aa11.23□□□□□ -0.61
DHFR-201ENST00000439211 DEFB130AP0DP74 79 aa11.23□□□□□ -0.61
DHFR-201ENST00000439211 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
DHFR-201ENST00000439211 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
DHFR-201ENST00000439211 A0A087WZ39 114 aa11.22□□□□□ -0.61
DHFR-201ENST00000439211 CCL24O00175 119 aa11.22□□□□□ -0.61
DHFR-201ENST00000439211 DEFB113Q30KQ7 82 aa11.22□□□□□ -0.61
DHFR-201ENST00000439211 C22orf24Q9Y442 160 aa11.22□□□□□ -0.61
DHFR-201ENST00000439211 CELSR2Q9HCU4 2923 aa11.21□□□□□ -0.61
DHFR-201ENST00000439211 FUSP35637 526 aaKnown RBP eCLIP11.21□□□□□ -0.612e-7■■■■■ 30.8
DHFR-201ENST00000439211 ATP5EP56381 51 aaPredicted RBP11.21□□□□□ -0.61
DHFR-201ENST00000439211 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
DHFR-201ENST00000439211 TRAV10A0A0B4J240 114 aa11.21□□□□□ -0.62
DHFR-201ENST00000439211 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.21□□□□□ -0.62
DHFR-201ENST00000439211 C4orf3Q8WVX3 66 aa11.2□□□□□ -0.62
DHFR-201ENST00000439211 K7EQD1 137 aa11.2□□□□□ -0.62
DHFR-201ENST00000439211 LYPD5Q6UWN5 251 aa11.19□□□□□ -0.62
DHFR-201ENST00000439211 Q8N3U1 123 aa11.19□□□□□ -0.62
DHFR-201ENST00000439211 CCL18P55774 89 aa11.19□□□□□ -0.62
DHFR-201ENST00000439211 WFDC10AQ9H1F0 79 aa11.18□□□□□ -0.62
DHFR-201ENST00000439211 FLNAP21333 2647 aaKnown RBP11.17□□□□□ -0.62
DHFR-201ENST00000439211 ODF3L2Q3SX64 289 aa11.17□□□□□ -0.62
DHFR-201ENST00000439211 BBC3Q96PG8 261 aaPredicted RBP11.16□□□□□ -0.62
DHFR-201ENST00000439211 A0A096LPF7 62 aa11.16□□□□□ -0.62
DHFR-201ENST00000439211 KLKP1Q107X0 134 aa11.16□□□□□ -0.62
DHFR-201ENST00000439211 CLPSL2Q6UWE3 100 aa11.16□□□□□ -0.62
DHFR-201ENST00000439211 IGLV5-39A0A0G2JS06 123 aa11.15□□□□□ -0.62
DHFR-201ENST00000439211 LOC100131303A0A0U1RQF7 123 aa11.15□□□□□ -0.62
DHFR-201ENST00000439211 TRBV10-1A0A0K0K1A3 114 aa11.15□□□□□ -0.63
DHFR-201ENST00000439211 TRBV10-3A0A0K0K1G6 114 aa11.15□□□□□ -0.63
DHFR-201ENST00000439211 ESRGQ1W209 222 aa11.15□□□□□ -0.63
DHFR-201ENST00000439211 C11orf72Q8NBR9 251 aa11.14□□□□□ -0.63
DHFR-201ENST00000439211 NREPQ16612 68 aa11.14□□□□□ -0.63
DHFR-201ENST00000439211 TM2D3Q9BRN9 247 aa11.14□□□□□ -0.63
DHFR-201ENST00000439211 LINC01547P58512 204 aaPredicted RBP11.14□□□□□ -0.63
DHFR-201ENST00000439211 TMEM254Q8TBM7 123 aa11.14□□□□□ -0.63
DHFR-201ENST00000439211 FBN2P35556 2912 aa11.13□□□□□ -0.63
DHFR-201ENST00000439211 C1orf158Q8N1D5 194 aa11.13□□□□□ -0.63
DHFR-201ENST00000439211 ZNF843Q8N446 348 aa11.13□□□□□ -0.63
DHFR-201ENST00000439211 IGKV2-28A0A075B6P5 120 aa11.13□□□□□ -0.63
DHFR-201ENST00000439211 PSPHP1O15172 72 aa11.13□□□□□ -0.63
DHFR-201ENST00000439211 IGKV2D-28P01615 120 aa11.13□□□□□ -0.63
DHFR-201ENST00000439211 NF1P21359 2839 aa11.12□□□□□ -0.63
DHFR-201ENST00000439211 C16orf95Q9H693 158 aa11.12□□□□□ -0.63
DHFR-201ENST00000439211 MXRA5Q9NR99 2828 aa11.12□□□□□ -0.63
DHFR-201ENST00000439211 DNAJC9-AS1A6NH13 148 aa11.11□□□□□ -0.63
DHFR-201ENST00000439211 PLA2G2AP14555 144 aa11.1□□□□□ -0.63
DHFR-201ENST00000439211 ITPR3Q14573 2671 aa11.09□□□□□ -0.63
DHFR-201ENST00000439211 Q6ZVQ6 151 aa11.09□□□□□ -0.63
DHFR-201ENST00000439211 Q8N814 137 aa11.09□□□□□ -0.63
DHFR-201ENST00000439211 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
DHFR-201ENST00000439211 HTN3P15516 51 aa11.08□□□□□ -0.64
DHFR-201ENST00000439211 SPTSSBQ8NFR3 76 aa11.08□□□□□ -0.64
DHFR-201ENST00000439211 FAM104AQ969W3 186 aa11.08□□□□□ -0.64
DHFR-201ENST00000439211 PRR3P79522 188 aaKnown RBP11.08□□□□□ -0.64
DHFR-201ENST00000439211 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
DHFR-201ENST00000439211 ZFHX3Q15911 3703 aa11.08□□□□□ -0.64
DHFR-201ENST00000439211 BPY2O14599 106 aa11.08□□□□□ -0.64
DHFR-201ENST00000439211 C6orf99Q4VX62 202 aa11.07□□□□□ -0.64
DHFR-201ENST00000439211 NTM-AS1Q6ZSK4 140 aa11.07□□□□□ -0.64
DHFR-201ENST00000439211 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
DHFR-201ENST00000439211 C16orf74Q96GX8 76 aa11.06□□□□□ -0.64
DHFR-201ENST00000439211 ESM1Q9NQ30 184 aa11.06□□□□□ -0.64
DHFR-201ENST00000439211 PRYO14603 147 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms