RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 GHRHP01286 108 aa8.28□□□□□ -1.08
TRAPPC9-202ENST00000438773 OVOL2Q9BRP0 275 aa8.27□□□□□ -1.09
TRAPPC9-202ENST00000438773 RBM3P98179 157 aaKnown RBP8.27□□□□□ -1.09
TRAPPC9-202ENST00000438773 MIAQ16674 131 aa8.27□□□□□ -1.09
TRAPPC9-202ENST00000438773 POM121L12Q8N7R1 296 aa8.26□□□□□ -1.09
TRAPPC9-202ENST00000438773 A0A0B4J2C4 111 aa8.26□□□□□ -1.09
TRAPPC9-202ENST00000438773 H3BT86 120 aa8.26□□□□□ -1.09
TRAPPC9-202ENST00000438773 MRPS36P82909 103 aaKnown RBP8.26□□□□□ -1.09
TRAPPC9-202ENST00000438773 hADV29S1A0JD25 119 aa8.26□□□□□ -1.09
TRAPPC9-202ENST00000438773 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC9-202ENST00000438773 CHCHD7Q9BUK0 85 aa8.26□□□□□ -1.09
TRAPPC9-202ENST00000438773 CDC42SE2Q9NRR3 84 aa8.25□□□□□ -1.09
TRAPPC9-202ENST00000438773 NCR3O14931 201 aa8.25□□□□□ -1.09
TRAPPC9-202ENST00000438773 LINC00694P0DN24 101 aa8.25□□□□□ -1.09
TRAPPC9-202ENST00000438773 FHL2Q14192 279 aa8.25□□□□□ -1.09
TRAPPC9-202ENST00000438773 NKAPP1Q8N9T2 125 aa8.25□□□□□ -1.09
TRAPPC9-202ENST00000438773 RETNQ9HD89 108 aa8.25□□□□□ -1.09
TRAPPC9-202ENST00000438773 ORMDL1Q9P0S3 153 aa8.25□□□□□ -1.09
TRAPPC9-202ENST00000438773 LINC00526Q96FQ7 95 aa8.24□□□□□ -1.09
TRAPPC9-202ENST00000438773 KPRPQ5T749 579 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC9-202ENST00000438773 SCXQ7RTU7 201 aa8.24□□□□□ -1.09
TRAPPC9-202ENST00000438773 NDUFA1O15239 70 aa8.23□□□□□ -1.09
TRAPPC9-202ENST00000438773 CXCL5P42830 114 aa8.23□□□□□ -1.09
TRAPPC9-202ENST00000438773 LINC00242Q5T6M2 205 aa8.23□□□□□ -1.09
TRAPPC9-202ENST00000438773 LINC00308Q8TCZ7 52 aa8.23□□□□□ -1.09
TRAPPC9-202ENST00000438773 Q9UF83 564 aa8.23□□□□□ -1.09
TRAPPC9-202ENST00000438773 DSCR8Q96T75 97 aa8.23□□□□□ -1.09
TRAPPC9-202ENST00000438773 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC9-202ENST00000438773 C20orf197Q8N268 126 aa8.22□□□□□ -1.09
TRAPPC9-202ENST00000438773 COL6A5A8TX70 2615 aa8.22□□□□□ -1.09
TRAPPC9-202ENST00000438773 WFDC9Q8NEX5 89 aa8.22□□□□□ -1.09
TRAPPC9-202ENST00000438773 LINC00959A0A1B0GUT2 108 aa8.22□□□□□ -1.09
TRAPPC9-202ENST00000438773 KRTAP1-1Q07627 177 aa8.22□□□□□ -1.09
TRAPPC9-202ENST00000438773 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
TRAPPC9-202ENST00000438773 HIGD2BQ4VC39 106 aa8.21□□□□□ -1.09
TRAPPC9-202ENST00000438773 CELSR2Q9HCU4 2923 aa8.21□□□□□ -1.09
TRAPPC9-202ENST00000438773 ITPR1Q14643 2758 aa8.21□□□□□ -1.1
TRAPPC9-202ENST00000438773 LELP1Q5T871 98 aa8.2□□□□□ -1.1
TRAPPC9-202ENST00000438773 IGLV4-60A0A075B6I1 120 aa8.2□□□□□ -1.1
TRAPPC9-202ENST00000438773 A0A0J9YWU9 116 aa8.2□□□□□ -1.1
TRAPPC9-202ENST00000438773 AMELXQ99217 191 aa8.2□□□□□ -1.1
TRAPPC9-202ENST00000438773 NANOS2P60321 138 aaKnown RBP8.2□□□□□ -1.1
TRAPPC9-202ENST00000438773 LINC00643Q86TS7 51 aa8.2□□□□□ -1.1
TRAPPC9-202ENST00000438773 ITPR2Q14571 2701 aa8.2□□□□□ -1.1
TRAPPC9-202ENST00000438773 ACYP1P07311 99 aa8.2□□□□□ -1.1
TRAPPC9-202ENST00000438773 CR1P17927 2039 aa8.19□□□□□ -1.1
TRAPPC9-202ENST00000438773 RPL18AQ02543 176 aaKnown RBP8.19□□□□□ -1.1
TRAPPC9-202ENST00000438773 A0A087WVE0 104 aa8.18□□□□□ -1.1
TRAPPC9-202ENST00000438773 ATOX1O00244 68 aa8.18□□□□□ -1.1
TRAPPC9-202ENST00000438773 CD164L2Q6UWJ8 174 aa8.18□□□□□ -1.1
TRAPPC9-202ENST00000438773 SPANXCQ9NY87 97 aa8.18□□□□□ -1.1
TRAPPC9-202ENST00000438773 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
TRAPPC9-202ENST00000438773 TRAV10A0A0B4J240 114 aa8.17□□□□□ -1.1
TRAPPC9-202ENST00000438773 CSDC2Q9Y534 153 aaKnown RBP8.17□□□□□ -1.1
TRAPPC9-202ENST00000438773 IBA57-AS1B1ANH7 110 aa8.17□□□□□ -1.1
TRAPPC9-202ENST00000438773 COX6A2Q02221 97 aa8.17□□□□□ -1.1
TRAPPC9-202ENST00000438773 Q6ZTC4 211 aa8.17□□□□□ -1.1
TRAPPC9-202ENST00000438773 UTP20O75691 2785 aaKnown RBP8.17□□□□□ -1.1
TRAPPC9-202ENST00000438773 H0YGX0 51 aa8.17□□□□□ -1.1
TRAPPC9-202ENST00000438773 SPATA3Q8NHX4 192 aa8.17□□□□□ -1.1
TRAPPC9-202ENST00000438773 SMIM1B2RUZ4 78 aa8.16□□□□□ -1.1
TRAPPC9-202ENST00000438773 J3KT08 172 aa8.16□□□□□ -1.1
TRAPPC9-202ENST00000438773 ENHOQ6UWT2 76 aa8.16□□□□□ -1.1
TRAPPC9-202ENST00000438773 XAGE1AQ9HD64 81 aa8.16□□□□□ -1.1
TRAPPC9-202ENST00000438773 UBR5O95071 2799 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC9-202ENST00000438773 LST1O00453 97 aa8.15□□□□□ -1.1
TRAPPC9-202ENST00000438773 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
TRAPPC9-202ENST00000438773 ZANQ9Y493 2812 aa8.15□□□□□ -1.1
TRAPPC9-202ENST00000438773 A8MTW9 85 aa8.15□□□□□ -1.11
TRAPPC9-202ENST00000438773 SBSPONQ8IVN8 264 aa8.15□□□□□ -1.11
TRAPPC9-202ENST00000438773 TIMM17BO60830 172 aa8.15□□□□□ -1.11
TRAPPC9-202ENST00000438773 LY6G6CO95867 125 aa8.15□□□□□ -1.11
TRAPPC9-202ENST00000438773 NHLRC4P0CG21 123 aaPredicted RBP8.15□□□□□ -1.11
TRAPPC9-202ENST00000438773 PRR3P79522 188 aaKnown RBP8.15□□□□□ -1.11
TRAPPC9-202ENST00000438773 CELA1Q9UNI1 258 aa8.14□□□□□ -1.11
TRAPPC9-202ENST00000438773 X6R8D5 127 aa8.14□□□□□ -1.11
TRAPPC9-202ENST00000438773 SPANXDQ9BXN6 97 aa8.13□□□□□ -1.11
TRAPPC9-202ENST00000438773 LOC107984640A0A0U1RRK4 108 aa8.12□□□□□ -1.11
TRAPPC9-202ENST00000438773 UQCRQO14949 82 aa8.12□□□□□ -1.11
TRAPPC9-202ENST00000438773 KRTAP10-3P60369 221 aa8.12□□□□□ -1.11
TRAPPC9-202ENST00000438773 SNURFQ9Y675 71 aa8.12□□□□□ -1.11
TRAPPC9-202ENST00000438773 A0A087WZ39 114 aa8.11□□□□□ -1.11
TRAPPC9-202ENST00000438773 C3orf22Q8N5N4 141 aa8.11□□□□□ -1.11
TRAPPC9-202ENST00000438773 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
TRAPPC9-202ENST00000438773 M0QXV9 152 aa8.11□□□□□ -1.11
TRAPPC9-202ENST00000438773 MPLKIPQ8TAP9 179 aa8.11□□□□□ -1.11
TRAPPC9-202ENST00000438773 A0A0U1RQV1 116 aa8.1□□□□□ -1.11
TRAPPC9-202ENST00000438773 SMIM11BQ8TCY0 68 aa8.1□□□□□ -1.11
TRAPPC9-202ENST00000438773 UBE2BP63146 152 aa8.1□□□□□ -1.11
TRAPPC9-202ENST00000438773 UPK3BQ9BT76 320 aa8.1□□□□□ -1.11
TRAPPC9-202ENST00000438773 A0A1B0GUV1 79 aa8.09□□□□□ -1.11
TRAPPC9-202ENST00000438773 USP17L23D6RBM5 183 aa8.09□□□□□ -1.11
TRAPPC9-202ENST00000438773 F8WEM9 126 aa8.09□□□□□ -1.11
TRAPPC9-202ENST00000438773 Q8IZM0 81 aa8.09□□□□□ -1.11
TRAPPC9-202ENST00000438773 C19orf73Q9NVV2 129 aa8.09□□□□□ -1.11
TRAPPC9-202ENST00000438773 PKIGQ9Y2B9 76 aa8.09□□□□□ -1.11
TRAPPC9-202ENST00000438773 ETDCA0A1B0GVM5 59 aa8.08□□□□□ -1.12
TRAPPC9-202ENST00000438773 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
TRAPPC9-202ENST00000438773 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC9-202ENST00000438773 NOTCH1P46531 2555 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms