RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 VCX2Q9H322 139 aa10.82□□□□□ -0.68
GTF3A-204ENST00000438571 C22orf24Q9Y442 160 aa10.82□□□□□ -0.68
GTF3A-204ENST00000438571 PRSS2P07478 247 aa10.81□□□□□ -0.68
GTF3A-204ENST00000438571 PNRC1Q12796 327 aaPredicted RBP10.81□□□□□ -0.68
GTF3A-204ENST00000438571 FAM19A3Q7Z5A8 133 aa10.81□□□□□ -0.68
GTF3A-204ENST00000438571 Q8IZM0 81 aa10.81□□□□□ -0.68
GTF3A-204ENST00000438571 CDKN2A-AS1Q9UH64 79 aa10.81□□□□□ -0.68
GTF3A-204ENST00000438571 ZNF861PO60384 105 aa10.79□□□□□ -0.68
GTF3A-204ENST00000438571 CKS1BP61024 79 aa10.79□□□□□ -0.68
GTF3A-204ENST00000438571 PRR4Q16378 134 aa10.79□□□□□ -0.68
GTF3A-204ENST00000438571 ORMDL2Q53FV1 153 aa10.79□□□□□ -0.68
GTF3A-204ENST00000438571 ALKBH7Q9BT30 221 aaPredicted RBP10.79□□□□□ -0.68
GTF3A-204ENST00000438571 C6orf226Q5I0X4 101 aa10.78□□□□□ -0.68
GTF3A-204ENST00000438571 ANAPC16Q96DE5 110 aa10.78□□□□□ -0.68
GTF3A-204ENST00000438571 ATP6V1G1O75348 118 aa10.77□□□□□ -0.69
GTF3A-204ENST00000438571 CTDSP1Q9GZU7 261 aa10.77□□□□□ -0.69
GTF3A-204ENST00000438571 MT-ND4LP03901 98 aa10.76□□□□□ -0.69
GTF3A-204ENST00000438571 RPL13AP40429 203 aaKnown RBP10.76□□□□□ -0.69
GTF3A-204ENST00000438571 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
GTF3A-204ENST00000438571 SVBPQ8N300 66 aa10.76□□□□□ -0.69
GTF3A-204ENST00000438571 RPS10P5Q9NQ39 176 aa10.76□□□□□ -0.69
GTF3A-204ENST00000438571 A0A087X002 238 aa10.75□□□□□ -0.69
GTF3A-204ENST00000438571 F8VRH5 84 aa10.75□□□□□ -0.69
GTF3A-204ENST00000438571 NUPR1O60356 82 aa10.75□□□□□ -0.69
GTF3A-204ENST00000438571 NPSP0C0P6 89 aa10.75□□□□□ -0.69
GTF3A-204ENST00000438571 HERVK_113P63121 156 aa10.75□□□□□ -0.69
GTF3A-204ENST00000438571 SNAPINO95295 136 aa10.74□□□□□ -0.69
GTF3A-204ENST00000438571 TIMM17AQ99595 171 aa10.74□□□□□ -0.69
GTF3A-204ENST00000438571 NXT2Q9NPJ8 142 aaKnown RBP10.74□□□□□ -0.69
GTF3A-204ENST00000438571 SMIM1B2RUZ4 78 aa10.73□□□□□ -0.69
GTF3A-204ENST00000438571 K7EMI3 77 aa10.73□□□□□ -0.69
GTF3A-204ENST00000438571 TSPAN13O95857 204 aa10.73□□□□□ -0.69
GTF3A-204ENST00000438571 RHEBQ15382 184 aa10.73□□□□□ -0.69
GTF3A-204ENST00000438571 MRPL55Q7Z7F7 128 aaKnown RBP10.73□□□□□ -0.69
GTF3A-204ENST00000438571 TOMM6Q96B49 74 aa10.73□□□□□ -0.69
GTF3A-204ENST00000438571 GEMIN7Q9H840 131 aaKnown RBP10.73□□□□□ -0.69
GTF3A-204ENST00000438571 RPL37AP8A6NKH3 93 aa10.71□□□□□ -0.69
GTF3A-204ENST00000438571 LBHQ53QV2 105 aaPredicted RBP10.71□□□□□ -0.69
GTF3A-204ENST00000438571 TP73-AS1Q9UF72 201 aa10.71□□□□□ -0.69
GTF3A-204ENST00000438571 BCE1O60756 84 aa10.7□□□□□ -0.7
GTF3A-204ENST00000438571 SEC11AP67812 179 aa10.7□□□□□ -0.7
GTF3A-204ENST00000438571 LINC00167Q96N53 147 aa10.7□□□□□ -0.7
GTF3A-204ENST00000438571 ANAPC11Q9NYG5 84 aa10.7□□□□□ -0.7
GTF3A-204ENST00000438571 GAGE10A6NGK3 116 aa10.69□□□□□ -0.7
GTF3A-204ENST00000438571 SCO1O75880 301 aa10.69□□□□□ -0.7
GTF3A-204ENST00000438571 S100A1P23297 94 aa10.68□□□□□ -0.7
GTF3A-204ENST00000438571 CXCL5P42830 114 aa10.68□□□□□ -0.7
GTF3A-204ENST00000438571 PAPPA-AS1Q5QFB9 102 aa10.68□□□□□ -0.7
GTF3A-204ENST00000438571 ERASQ7Z444 233 aa10.68□□□□□ -0.7
GTF3A-204ENST00000438571 COX7B2Q8TF08 81 aa10.68□□□□□ -0.7
GTF3A-204ENST00000438571 SCGB3A1Q96QR1 104 aa10.68□□□□□ -0.7
GTF3A-204ENST00000438571 IGLV5-45A0A087WSX0 123 aa10.67□□□□□ -0.7
GTF3A-204ENST00000438571 SPINK8P0C7L1 97 aa10.67□□□□□ -0.7
GTF3A-204ENST00000438571 CBLN2Q8IUK8 224 aa10.67□□□□□ -0.7
GTF3A-204ENST00000438571 MUC17Q685J3 4493 aa10.66□□□□□ -0.7
GTF3A-204ENST00000438571 TINCRA0A1B0GVN0 87 aa10.66□□□□□ -0.7
GTF3A-204ENST00000438571 RPL28P46779 137 aaKnown RBP10.66□□□□□ -0.7
GTF3A-204ENST00000438571 RAB5BP61020 215 aa10.66□□□□□ -0.7
GTF3A-204ENST00000438571 PDZD11Q5EBL8 140 aa10.66□□□□□ -0.7
GTF3A-204ENST00000438571 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.7
GTF3A-204ENST00000438571 KRTAP13-1Q8IUC0 172 aa10.65□□□□□ -0.7
GTF3A-204ENST00000438571 TYMSOSQ8TAI1 123 aa10.64□□□□□ -0.71
GTF3A-204ENST00000438571 FAT4Q6V0I7 4981 aa10.64□□□□□ -0.71
GTF3A-204ENST00000438571 G0S2P27469 103 aa10.63□□□□□ -0.71
GTF3A-204ENST00000438571 YPEL4Q96NS1 127 aa10.63□□□□□ -0.71
GTF3A-204ENST00000438571 IGLV5-37A0A075B6J1 123 aa10.62□□□□□ -0.71
GTF3A-204ENST00000438571 CRYGAP11844 174 aa10.62□□□□□ -0.71
GTF3A-204ENST00000438571 S100PP25815 95 aa10.62□□□□□ -0.71
GTF3A-204ENST00000438571 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
GTF3A-204ENST00000438571 SMCO4Q9NRQ5 59 aa10.62□□□□□ -0.71
GTF3A-204ENST00000438571 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
GTF3A-204ENST00000438571 RETNLBQ9BQ08 111 aa10.61□□□□□ -0.71
GTF3A-204ENST00000438571 IGKV2-28A0A075B6P5 120 aa10.6□□□□□ -0.71
GTF3A-204ENST00000438571 IGKV2D-28P01615 120 aa10.6□□□□□ -0.71
GTF3A-204ENST00000438571 UBE2AP49459 152 aa10.59□□□□□ -0.71
GTF3A-204ENST00000438571 PMVKQ15126 192 aa10.59□□□□□ -0.71
GTF3A-204ENST00000438571 NKAPP1Q8N9T2 125 aa10.59□□□□□ -0.71
GTF3A-204ENST00000438571 TRAV9-1A0A075B6T8 112 aa10.58□□□□□ -0.72
GTF3A-204ENST00000438571 PRLHP81277 87 aa10.58□□□□□ -0.72
GTF3A-204ENST00000438571 PFN2P35080 140 aa10.57□□□□□ -0.72
GTF3A-204ENST00000438571 Q8NDZ9 215 aa10.57□□□□□ -0.72
GTF3A-204ENST00000438571 A0A096LNJ9 63 aa10.56□□□□□ -0.72
GTF3A-204ENST00000438571 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
GTF3A-204ENST00000438571 COLCA2A8K830 154 aa10.55□□□□□ -0.72
GTF3A-204ENST00000438571 VPREB1P12018 145 aa10.55□□□□□ -0.72
GTF3A-204ENST00000438571 IGLV5-39A0A0G2JS06 123 aa10.54□□□□□ -0.72
GTF3A-204ENST00000438571 TMEM238C9JI98 176 aa10.54□□□□□ -0.72
GTF3A-204ENST00000438571 ATP5LO75964 103 aa10.54□□□□□ -0.72
GTF3A-204ENST00000438571 IGLC3P0DOY3 106 aa10.54□□□□□ -0.72
GTF3A-204ENST00000438571 ZNF22P17026 224 aaPredicted RBP10.54□□□□□ -0.72
GTF3A-204ENST00000438571 FA2HQ7L5A8 372 aa10.54□□□□□ -0.72
GTF3A-204ENST00000438571 MRPL18Q9H0U6 180 aaKnown RBP10.54□□□□□ -0.72
GTF3A-204ENST00000438571 LINC00304Q8N9R0 145 aa10.53□□□□□ -0.72
GTF3A-204ENST00000438571 URB1-AS1Q96HZ7 61 aa10.53□□□□□ -0.72
GTF3A-204ENST00000438571 LINC01549A6NIU2 74 aa10.52□□□□□ -0.73
GTF3A-204ENST00000438571 H3BRM9 83 aa10.52□□□□□ -0.73
GTF3A-204ENST00000438571 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.73
GTF3A-204ENST00000438571 FAM229BQ4G0N7 80 aa10.52□□□□□ -0.73
GTF3A-204ENST00000438571 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
GTF3A-204ENST00000438571 ZNF625Q96I27 306 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms