RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 IGKCP01834 107 aa6.92□□□□□ -1.3
HLA-DMB-259ENST00000438510 HIGD2BQ4VC39 106 aa6.92□□□□□ -1.3
HLA-DMB-259ENST00000438510 BIRC6Q9NR09 4857 aa6.92□□□□□ -1.3
HLA-DMB-259ENST00000438510 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 SMIM1B2RUZ4 78 aa6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 F8WDY8 70 aa6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 DLEU1O43261 78 aa6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 PRSS2P07478 247 aa6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 C2orf48Q96LS8 159 aa6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
HLA-DMB-259ENST00000438510 PKD1P98161 4303 aa6.9□□□□□ -1.3
HLA-DMB-259ENST00000438510 IGLV5-52A0A0A0MRZ9 124 aa6.9□□□□□ -1.3
HLA-DMB-259ENST00000438510 HNRNPA3P51991 378 aaKnown RBP6.9□□□□□ -1.3
HLA-DMB-259ENST00000438510 HERVK_113P61574 105 aa6.9□□□□□ -1.3
HLA-DMB-259ENST00000438510 CNBPP62633 177 aaKnown RBP6.9□□□□□ -1.3
HLA-DMB-259ENST00000438510 Q8IZM0 81 aa6.9□□□□□ -1.3
HLA-DMB-259ENST00000438510 TOMM7Q9P0U1 55 aa6.9□□□□□ -1.3
HLA-DMB-259ENST00000438510 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
HLA-DMB-259ENST00000438510 CXCL5P42830 114 aa6.89□□□□□ -1.31
HLA-DMB-259ENST00000438510 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
HLA-DMB-259ENST00000438510 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
HLA-DMB-259ENST00000438510 CARD19Q96LW7 228 aa6.89□□□□□ -1.31
HLA-DMB-259ENST00000438510 CAMK2N2Q96S95 79 aa6.89□□□□□ -1.31
HLA-DMB-259ENST00000438510 HECTD4Q9Y4D8 3996 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 IGLV5-39A0A0G2JS06 123 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 NDUFA1O15239 70 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 CKS1BP61024 79 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 SYCNQ0VAF6 134 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 C6orf226Q5I0X4 101 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 COL5A1-AS1Q5SY13 56 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 LINC00526Q96FQ7 95 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 PKIGQ9Y2B9 76 aa6.88□□□□□ -1.31
HLA-DMB-259ENST00000438510 COX8AP10176 69 aa6.87□□□□□ -1.31
HLA-DMB-259ENST00000438510 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
HLA-DMB-259ENST00000438510 SFTA2Q6UW10 78 aa6.87□□□□□ -1.31
HLA-DMB-259ENST00000438510 SNHG12Q9BXW3 62 aa6.87□□□□□ -1.31
HLA-DMB-259ENST00000438510 DNAH11Q96DT5 4516 aa6.86□□□□□ -1.31
HLA-DMB-259ENST00000438510 SLPIP03973 132 aa6.86□□□□□ -1.31
HLA-DMB-259ENST00000438510 C9orf163Q8N9P6 203 aa6.86□□□□□ -1.31
HLA-DMB-259ENST00000438510 TRBV30A0A0K0K1B3 111 aa6.85□□□□□ -1.31
HLA-DMB-259ENST00000438510 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
HLA-DMB-259ENST00000438510 GCSHP23434 173 aa6.85□□□□□ -1.31
HLA-DMB-259ENST00000438510 Q6ZRU5 148 aa6.85□□□□□ -1.31
HLA-DMB-259ENST00000438510 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
HLA-DMB-259ENST00000438510 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
HLA-DMB-259ENST00000438510 E9PLD3 99 aa6.84□□□□□ -1.31
HLA-DMB-259ENST00000438510 LEPROTO15243 131 aa6.84□□□□□ -1.31
HLA-DMB-259ENST00000438510 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
HLA-DMB-259ENST00000438510 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
HLA-DMB-259ENST00000438510 C2orf82Q6UX34 121 aa6.84□□□□□ -1.31
HLA-DMB-259ENST00000438510 UNQ6190/PRO20217Q6UXQ8 127 aa6.83□□□□□ -1.32
HLA-DMB-259ENST00000438510 ATOH7Q8N100 152 aa6.83□□□□□ -1.32
HLA-DMB-259ENST00000438510 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
HLA-DMB-259ENST00000438510 C6orf48Q9UBA6 75 aa6.83□□□□□ -1.32
HLA-DMB-259ENST00000438510 J3QQQ9 107 aa6.82□□□□□ -1.32
HLA-DMB-259ENST00000438510 LGALS3P17931 250 aaKnown RBP6.82□□□□□ -1.32
HLA-DMB-259ENST00000438510 NMUP48645 174 aa6.82□□□□□ -1.32
HLA-DMB-259ENST00000438510 C10orf25Q5T742 122 aa6.82□□□□□ -1.32
HLA-DMB-259ENST00000438510 STPG4Q8N801 248 aa6.82□□□□□ -1.32
HLA-DMB-259ENST00000438510 HIGD1BQ9P298 99 aa6.82□□□□□ -1.32
HLA-DMB-259ENST00000438510 LOC107984640A0A0U1RRK4 108 aa6.81□□□□□ -1.32
HLA-DMB-259ENST00000438510 MYMXA0A1B0GTQ4 84 aa6.81□□□□□ -1.32
HLA-DMB-259ENST00000438510 HERV-K104P63124 156 aa6.81□□□□□ -1.32
HLA-DMB-259ENST00000438510 LINC01620Q4KN68 170 aa6.81□□□□□ -1.32
HLA-DMB-259ENST00000438510 DNAH5Q8TE73 4624 aa6.81□□□□□ -1.32
HLA-DMB-259ENST00000438510 TLX1NBP0CAT3 122 aa6.8□□□□□ -1.32
HLA-DMB-259ENST00000438510 TSPEAR-AS2P59090 65 aa6.8□□□□□ -1.32
HLA-DMB-259ENST00000438510 RPL18AQ02543 176 aaKnown RBP6.8□□□□□ -1.32
HLA-DMB-259ENST00000438510 ZNF625Q96I27 306 aaPredicted RBP6.8□□□□□ -1.32
HLA-DMB-259ENST00000438510 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
HLA-DMB-259ENST00000438510 PKHD1P08F94 4074 aa6.8□□□□□ -1.32
HLA-DMB-259ENST00000438510 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
HLA-DMB-259ENST00000438510 HSD52Q0P140 79 aa6.79□□□□□ -1.32
HLA-DMB-259ENST00000438510 TAL2Q16559 108 aa6.79□□□□□ -1.32
HLA-DMB-259ENST00000438510 MAJINQ3KP22 176 aa6.79□□□□□ -1.32
HLA-DMB-259ENST00000438510 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
HLA-DMB-259ENST00000438510 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
HLA-DMB-259ENST00000438510 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
HLA-DMB-259ENST00000438510 COX17Q14061 63 aa6.78□□□□□ -1.32
HLA-DMB-259ENST00000438510 ANKRD39Q53RE8 183 aa6.78□□□□□ -1.32
HLA-DMB-259ENST00000438510 C9orf116Q5BN46 136 aaPredicted RBP6.78□□□□□ -1.32
HLA-DMB-259ENST00000438510 MEIG1Q5JSS6 88 aa6.78□□□□□ -1.32
HLA-DMB-259ENST00000438510 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
HLA-DMB-259ENST00000438510 A0A096LNI7 61 aa6.77□□□□□ -1.33
HLA-DMB-259ENST00000438510 IGKV2D-26A0A0A0MRZ7 120 aa6.77□□□□□ -1.33
HLA-DMB-259ENST00000438510 IGKV2-24A0A0C4DH68 120 aa6.77□□□□□ -1.33
HLA-DMB-259ENST00000438510 A6NDN8 102 aa6.77□□□□□ -1.33
HLA-DMB-259ENST00000438510 PTTG1IPP53801 180 aa6.77□□□□□ -1.33
HLA-DMB-259ENST00000438510 GAGE2BQ13066 116 aa6.77□□□□□ -1.33
HLA-DMB-259ENST00000438510 A0A1B0GV90 55 aa6.76□□□□□ -1.33
HLA-DMB-259ENST00000438510 ZNF815PA8K554 130 aa6.76□□□□□ -1.33
HLA-DMB-259ENST00000438510 PFN2P35080 140 aa6.76□□□□□ -1.33
HLA-DMB-259ENST00000438510 BVES-AS1Q5T3Y7 98 aa6.76□□□□□ -1.33
HLA-DMB-259ENST00000438510 Q6ZRP5 223 aa6.76□□□□□ -1.33
HLA-DMB-259ENST00000438510 Q6ZSA8 131 aa6.76□□□□□ -1.33
HLA-DMB-259ENST00000438510 CIRBPQ14011 172 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms