RNA–Protein interactions for RNA: ENST00000437167.1

RGPD6-203, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-203ENST00000437167 D6R8Y8 96 aa0.61□□□□□ -2.31
RGPD6-203ENST00000437167 K7EP34 96 aa0.61□□□□□ -2.31
RGPD6-203ENST00000437167 LEPROTL1O95214 131 aa0.61□□□□□ -2.31
RGPD6-203ENST00000437167 CFDP00746 253 aaPredicted RBP0.61□□□□□ -2.31
RGPD6-203ENST00000437167 ALKAL2Q6UX46 152 aa0.61□□□□□ -2.31
RGPD6-203ENST00000437167 MUSTN1Q8IVN3 82 aa0.61□□□□□ -2.31
RGPD6-203ENST00000437167 CEP162Q5TB80 1403 aa0.61□□□□□ -2.31
RGPD6-203ENST00000437167 XRN1Q8IZH2 1706 aaKnown RBP0.61□□□□□ -2.31
RGPD6-203ENST00000437167 CLTCQ00610 1675 aaKnown RBP0.6□□□□□ -2.31
RGPD6-203ENST00000437167 TPRP12270 2363 aaKnown RBP0.6□□□□□ -2.31
RGPD6-203ENST00000437167 SMIM11AP58511 58 aa0.6□□□□□ -2.31
RGPD6-203ENST00000437167 IQSEC2Q5JU85 1478 aa0.6□□□□□ -2.31
RGPD6-203ENST00000437167 SETBP1Q9Y6X0 1596 aa0.59□□□□□ -2.31
RGPD6-203ENST00000437167 CACNA1CQ13936 2221 aa0.59□□□□□ -2.31
RGPD6-203ENST00000437167 PEA15Q15121 130 aa0.59□□□□□ -2.31
RGPD6-203ENST00000437167 NHSL1Q5SYE7 1610 aa0.59□□□□□ -2.32
RGPD6-203ENST00000437167 KNDC1Q76NI1 1749 aa0.58□□□□□ -2.32
RGPD6-203ENST00000437167 MON2Q7Z3U7 1717 aa0.58□□□□□ -2.32
RGPD6-203ENST00000437167 CACNA1EQ15878 2313 aa0.58□□□□□ -2.32
RGPD6-203ENST00000437167 COX6B1P14854 86 aa0.58□□□□□ -2.32
RGPD6-203ENST00000437167 CELSR2Q9HCU4 2923 aa0.58□□□□□ -2.32
RGPD6-203ENST00000437167 K7EQZ3 153 aa0.57□□□□□ -2.32
RGPD6-203ENST00000437167 HMGN2P05204 90 aaKnown RBP0.57□□□□□ -2.32
RGPD6-203ENST00000437167 Q5VSD8 79 aa0.57□□□□□ -2.32
RGPD6-203ENST00000437167 S100A16Q96FQ6 103 aaKnown RBP0.57□□□□□ -2.32
RGPD6-203ENST00000437167 A0A0G2JMZ2 1700 aa0.57□□□□□ -2.32
RGPD6-203ENST00000437167 ABCC3O15438 1527 aa0.56□□□□□ -2.32
RGPD6-203ENST00000437167 CYB5AP00167 134 aa0.56□□□□□ -2.32
RGPD6-203ENST00000437167 PLIN4Q96Q06 1357 aa0.56□□□□□ -2.32
RGPD6-203ENST00000437167 CUX1P39880 1505 aa0.55□□□□□ -2.32
RGPD6-203ENST00000437167 TARBP1Q13395 1621 aaKnown RBP0.55□□□□□ -2.32
RGPD6-203ENST00000437167 CHD9Q3L8U1 2897 aa0.55□□□□□ -2.32
RGPD6-203ENST00000437167 GPR98Q8WXG9 6306 aa0.54□□□□□ -2.32
RGPD6-203ENST00000437167 SPRR1AP35321 89 aa0.54□□□□□ -2.32
RGPD6-203ENST00000437167 DEFB109BQ30KR1 87 aa0.54□□□□□ -2.32
RGPD6-203ENST00000437167 UBE2D4Q9Y2X8 147 aa0.54□□□□□ -2.32
RGPD6-203ENST00000437167 U3KQA8 63 aa0.54□□□□□ -2.32
RGPD6-203ENST00000437167 AHCTF1Q8WYP5 2266 aa0.54□□□□□ -2.32
RGPD6-203ENST00000437167 F8P00451 2351 aa0.53□□□□□ -2.32
RGPD6-203ENST00000437167 USMG5Q96IX5 58 aa0.53□□□□□ -2.32
RGPD6-203ENST00000437167 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.32
RGPD6-203ENST00000437167 SPTBN2O15020 2390 aa0.53□□□□□ -2.33
RGPD6-203ENST00000437167 SHPRHQ149N8 1683 aa0.53□□□□□ -2.33
RGPD6-203ENST00000437167 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
RGPD6-203ENST00000437167 IGLC2P0DOY2 106 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 IGLC3P0DOY3 106 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 SPRR1BP22528 89 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 NMSQ5H8A3 153 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 SLIT1O75093 1534 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 NEXMIFQ5QGS0 1516 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 SAMD9Q5K651 1589 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 RB1CC1Q8TDY2 1594 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 KIAA1551Q9HCM1 1747 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 PAPPA2Q9BXP8 1791 aa0.52□□□□□ -2.33
RGPD6-203ENST00000437167 MYO3AQ8NEV4 1616 aa0.51□□□□□ -2.33
RGPD6-203ENST00000437167 RABAC1Q9UI14 185 aa0.51□□□□□ -2.33
RGPD6-203ENST00000437167 KIAA0556O60303 1618 aa0.5□□□□□ -2.33
RGPD6-203ENST00000437167 CCDC141Q6ZP82 1450 aa0.5□□□□□ -2.33
RGPD6-203ENST00000437167 SNRPFP62306 86 aaKnown RBP0.5□□□□□ -2.33
RGPD6-203ENST00000437167 TDRG1Q3Y452 100 aa0.5□□□□□ -2.33
RGPD6-203ENST00000437167 C2CD3Q4AC94 2353 aa0.5□□□□□ -2.33
RGPD6-203ENST00000437167 GOLGA4Q13439 2230 aaKnown RBP0.5□□□□□ -2.33
RGPD6-203ENST00000437167 PPRC1Q5VV67 1664 aaKnown RBP0.49□□□□□ -2.33
RGPD6-203ENST00000437167 CSMD3Q7Z407 3707 aa0.49□□□□□ -2.33
RGPD6-203ENST00000437167 IQCF6A8MYZ5 107 aa0.49□□□□□ -2.33
RGPD6-203ENST00000437167 COX8AP10176 69 aa0.49□□□□□ -2.33
RGPD6-203ENST00000437167 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
RGPD6-203ENST00000437167 PLGLAQ15195 96 aa0.48□□□□□ -2.33
RGPD6-203ENST00000437167 C5P01031 1676 aa0.48□□□□□ -2.33
RGPD6-203ENST00000437167 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
RGPD6-203ENST00000437167 DNAJC13O75165 2243 aa0.48□□□□□ -2.33
RGPD6-203ENST00000437167 UACAQ9BZF9 1416 aa0.47□□□□□ -2.33
RGPD6-203ENST00000437167 LINC00643Q86TS7 51 aa0.47□□□□□ -2.33
RGPD6-203ENST00000437167 CRIPTQ9P021 101 aa0.47□□□□□ -2.33
RGPD6-203ENST00000437167 OTOGQ6ZRI0 2925 aa0.47□□□□□ -2.33
RGPD6-203ENST00000437167 MYMXA0A1B0GTQ4 84 aa0.46□□□□□ -2.34
RGPD6-203ENST00000437167 DEFB112Q30KQ8 113 aa0.46□□□□□ -2.34
RGPD6-203ENST00000437167 ZNF292O60281 2723 aa0.46□□□□□ -2.34
RGPD6-203ENST00000437167 MED14O60244 1454 aa0.46□□□□□ -2.34
RGPD6-203ENST00000437167 ANKRD17O75179 2603 aaKnown RBP0.45□□□□□ -2.34
RGPD6-203ENST00000437167 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
RGPD6-203ENST00000437167 USF3Q68DE3 2245 aa0.45□□□□□ -2.34
RGPD6-203ENST00000437167 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
RGPD6-203ENST00000437167 PLCE1Q9P212 2302 aa0.44□□□□□ -2.34
RGPD6-203ENST00000437167 A0A1B0GUT8 65 aa0.44□□□□□ -2.34
RGPD6-203ENST00000437167 I3L3M4 83 aa0.44□□□□□ -2.34
RGPD6-203ENST00000437167 ZFYVE26Q68DK2 2539 aa0.44□□□□□ -2.34
RGPD6-203ENST00000437167 NKTRP30414 1462 aaKnown RBP0.43□□□□□ -2.34
RGPD6-203ENST00000437167 RGPD4Q7Z3J3 1758 aa0.43□□□□□ -2.34
RGPD6-203ENST00000437167 CPSF4LA6NMK7 179 aaKnown RBP0.43□□□□□ -2.34
RGPD6-203ENST00000437167 ACYP1P07311 99 aa0.43□□□□□ -2.34
RGPD6-203ENST00000437167 FXYD6Q9H0Q3 95 aa0.43□□□□□ -2.34
RGPD6-203ENST00000437167 LRRC37AA6NMS7 1700 aa0.43□□□□□ -2.34
RGPD6-203ENST00000437167 CRYBG1Q9Y4K1 1723 aa0.43□□□□□ -2.34
RGPD6-203ENST00000437167 ATP7BP35670 1465 aa0.42□□□□□ -2.34
RGPD6-203ENST00000437167 UBR1Q8IWV7 1749 aa0.42□□□□□ -2.34
RGPD6-203ENST00000437167 SPTY2D1-AS1A0A0U1RR47 76 aa0.42□□□□□ -2.34
RGPD6-203ENST00000437167 DEFB105AQ8NG35 78 aa0.42□□□□□ -2.34
RGPD6-203ENST00000437167 PIEZO2Q9H5I5 2752 aa0.42□□□□□ -2.34
RGPD6-203ENST00000437167 KIF14Q15058 1648 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms