RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TOMM5Q8N4H5 51 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 PATE1Q8WXA2 126 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 Q9BRP9 147 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 HIGD2AQ9BW72 106 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 TTTY12Q9BZ98 90 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 DOT1LQ8TEK3 1739 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 BRWD1Q9NSI6 2320 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 ZFHX3Q15911 3703 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 IGKV3D-7A0A0C4DH55 119 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 IGKV3OR2-268A0A0C4DH90 116 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 A0A0G2JQZ4 141 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 LINC01549A6NIU2 74 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 HIGD1CA8MV81 97 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 PPYP01298 95 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 IGLV3-1P01715 115 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 HRES1P13985 223 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 LRRC37A3O60309 1634 aa1.31□□□□□ -2.2
CLK1-204ENST00000432425 TRPM2O94759 1503 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 AGLP35573 1532 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 EFCAB6Q5THR3 1501 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 NRXN3Q9Y4C0 1643 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 TRBV6-5A0A0K0K1A5 114 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 IFI6P09912 130 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 CCL3L1P16619 93 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 TPRXLQ17RH7 258 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 ATP5EP2Q5VTU8 51 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 Q6ZTI0 123 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 SPACA4Q8TDM5 124 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 COX7B2Q8TF08 81 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 CCL26Q9Y258 94 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 SAMD9Q5K651 1589 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 LY75O60449 1722 aa1.3□□□□□ -2.2
CLK1-204ENST00000432425 DDX60LQ5H9U9 1706 aaKnown RBP1.3□□□□□ -2.2
CLK1-204ENST00000432425 EIF2AK4Q9P2K8 1649 aaKnown RBP1.3□□□□□ -2.2
CLK1-204ENST00000432425 F8VRH5 84 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 K7EMI3 77 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 HMGA1P17096 107 aaKnown RBP1.29□□□□□ -2.2
CLK1-204ENST00000432425 CCL18P55774 89 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 NWD1Q149M9 1564 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 ZNF563Q8TA94 476 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 FAM208AQ9UK61 1670 aaKnown RBP1.29□□□□□ -2.2
CLK1-204ENST00000432425 CACNA1CQ13936 2221 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 M0R135 149 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 DNAL4O96015 105 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 IL9P15248 144 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 PDE6GP18545 87 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 FAM74A4Q5TZK3 123 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 WFDC10AQ9H1F0 79 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 PSORS1C2Q9UIG4 136 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 KLK9Q9UKQ9 250 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 LINC01558Q9Y6Z2 57 aa1.29□□□□□ -2.2
CLK1-204ENST00000432425 CLTCL1P53675 1640 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 RTTNQ86VV8 2226 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 SORL1Q92673 2214 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 ALPK2Q86TB3 2170 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 SLIT1O75093 1534 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 TRBV6-4A0A1B0GX49 114 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 JMJD7-PLA2G4BH0Y9G9 81 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 PRH1P02810 166 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 SPINK7P58062 85 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 DEFB134Q4QY38 66 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 ADCY10Q96PN6 1610 aa1.28□□□□□ -2.2
CLK1-204ENST00000432425 ABCA1O95477 2261 aa1.28□□□□□ -2.21
CLK1-204ENST00000432425 IQGAP1P46940 1657 aa1.27□□□□□ -2.21
CLK1-204ENST00000432425 A0A087WTM6 91 aa1.27□□□□□ -2.21
CLK1-204ENST00000432425 NBDYA0A0U1RRE5 68 aa1.27□□□□□ -2.21
CLK1-204ENST00000432425 FCER1GP30273 86 aa1.27□□□□□ -2.21
CLK1-204ENST00000432425 AMELXQ99217 191 aa1.27□□□□□ -2.21
CLK1-204ENST00000432425 PLAC8Q9NZF1 115 aa1.27□□□□□ -2.21
CLK1-204ENST00000432425 R4GMQ9 66 aa1.27□□□□□ -2.21
CLK1-204ENST00000432425 ERCC6L2Q5T890 1561 aa1.27□□□□□ -2.21
CLK1-204ENST00000432425 FN1P02751 2386 aaKnown RBP1.27□□□□□ -2.21
CLK1-204ENST00000432425 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
CLK1-204ENST00000432425 CTXND1A0A1B0GTU2 59 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 IGKV2-29A2NJV5 120 aaPredicted RBP1.26□□□□□ -2.21
CLK1-204ENST00000432425 J3QKU1 62 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 RNASE3P12724 160 aaKnown RBP1.26□□□□□ -2.21
CLK1-204ENST00000432425 FXYD3Q14802 87 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 Q86TA4 180 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 KRTAP4-1Q9BYQ7 146 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 NFAT5O94916 1531 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 CADP27708 2225 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 TRGV4A0A0C4DH28 118 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 A0A1B0GUT8 65 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 ZNF137PP52743 207 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 RPL37AP61513 92 aaKnown RBP1.26□□□□□ -2.21
CLK1-204ENST00000432425 NREPQ16612 68 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 KRTAP13-4Q3LI77 160 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 SMIM4Q8WVI0 70 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 NMES1Q9C002 83 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 CMC2Q9NRP2 79 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 V9GYV3 84 aa1.26□□□□□ -2.21
CLK1-204ENST00000432425 QSER1Q2KHR3 1735 aa1.25□□□□□ -2.21
CLK1-204ENST00000432425 F5P12259 2224 aa1.25□□□□□ -2.21
CLK1-204ENST00000432425 FBN3Q75N90 2809 aa1.25□□□□□ -2.21
CLK1-204ENST00000432425 COL4A2P08572 1712 aa1.25□□□□□ -2.21
CLK1-204ENST00000432425 TOGARAM1Q9Y4F4 1720 aa1.25□□□□□ -2.21
CLK1-204ENST00000432425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.25□□□□□ -2.21
CLK1-204ENST00000432425 IGKV2-40A0A087WW87 121 aaPredicted RBP1.25□□□□□ -2.21
CLK1-204ENST00000432425 TRAV21A0A0B4J279 112 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms