RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 UBE2L6O14933 153 aa6.19□□□□□ -1.42
CDC42BPA-206ENST00000429440 ATP11AUNQ6ZP68 121 aa6.19□□□□□ -1.42
CDC42BPA-206ENST00000429440 ZFP36P26651 326 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-206ENST00000429440 UBE2AP49459 152 aa6.18□□□□□ -1.42
CDC42BPA-206ENST00000429440 C11orf44Q8N8P7 122 aa6.18□□□□□ -1.42
CDC42BPA-206ENST00000429440 ABCA2Q9BZC7 2435 aa6.18□□□□□ -1.42
CDC42BPA-206ENST00000429440 CELSR2Q9HCU4 2923 aa6.18□□□□□ -1.42
CDC42BPA-206ENST00000429440 ZNF73O43830 326 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-206ENST00000429440 LINC00158P58513 81 aa6.18□□□□□ -1.42
CDC42BPA-206ENST00000429440 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
CDC42BPA-206ENST00000429440 H3BQ85 93 aa6.17□□□□□ -1.42
CDC42BPA-206ENST00000429440 K7EQD1 137 aa6.17□□□□□ -1.42
CDC42BPA-206ENST00000429440 NDUFA4O00483 81 aa6.17□□□□□ -1.42
CDC42BPA-206ENST00000429440 ECSCRQ19T08 205 aa6.17□□□□□ -1.42
CDC42BPA-206ENST00000429440 CD164L2Q6UWJ8 174 aa6.17□□□□□ -1.42
CDC42BPA-206ENST00000429440 Q8N9W7 124 aa6.17□□□□□ -1.42
CDC42BPA-206ENST00000429440 COX7B2Q8TF08 81 aa6.17□□□□□ -1.42
CDC42BPA-206ENST00000429440 LINC00269Q8N2A0 174 aa6.16□□□□□ -1.42
CDC42BPA-206ENST00000429440 ZNF843Q8N446 348 aa6.16□□□□□ -1.42
CDC42BPA-206ENST00000429440 LINC01356Q8N9X3 169 aa6.16□□□□□ -1.42
CDC42BPA-206ENST00000429440 CYP4F30PQ9H0H9 118 aa6.16□□□□□ -1.42
CDC42BPA-206ENST00000429440 MAP1AP78559 2803 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-206ENST00000429440 A0A096LNT2 108 aa6.16□□□□□ -1.42
CDC42BPA-206ENST00000429440 Q5VV11 94 aa6.16□□□□□ -1.42
CDC42BPA-206ENST00000429440 HIGD2AQ9BW72 106 aa6.16□□□□□ -1.42
CDC42BPA-206ENST00000429440 FLNCQ14315 2725 aa6.15□□□□□ -1.42
CDC42BPA-206ENST00000429440 SPTAN1Q13813 2472 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-206ENST00000429440 LCE6AA0A183 80 aa6.15□□□□□ -1.42
CDC42BPA-206ENST00000429440 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.42
CDC42BPA-206ENST00000429440 A8MUN3 132 aa6.15□□□□□ -1.42
CDC42BPA-206ENST00000429440 H3BS24 57 aa6.15□□□□□ -1.42
CDC42BPA-206ENST00000429440 M0R2N4 97 aa6.15□□□□□ -1.42
CDC42BPA-206ENST00000429440 PSCAO43653 123 aa6.15□□□□□ -1.42
CDC42BPA-206ENST00000429440 TRBV6-8A0A0A6YYG3 113 aa6.15□□□□□ -1.43
CDC42BPA-206ENST00000429440 A6NN06 94 aa6.15□□□□□ -1.43
CDC42BPA-206ENST00000429440 C16orf90A8MZG2 172 aa6.15□□□□□ -1.43
CDC42BPA-206ENST00000429440 K7EMT4 169 aa6.15□□□□□ -1.43
CDC42BPA-206ENST00000429440 ATP6V0E1O15342 81 aa6.15□□□□□ -1.43
CDC42BPA-206ENST00000429440 PROK1P58294 105 aa6.15□□□□□ -1.43
CDC42BPA-206ENST00000429440 KMT2BQ9UMN6 2715 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-206ENST00000429440 CSMD2Q7Z408 3487 aa6.14□□□□□ -1.43
CDC42BPA-206ENST00000429440 C19orf84I3L1E1 186 aa6.14□□□□□ -1.43
CDC42BPA-206ENST00000429440 IGHV4-31P0DP07 118 aa6.14□□□□□ -1.43
CDC42BPA-206ENST00000429440 IGHV4-38-2P0DP08 117 aa6.14□□□□□ -1.43
CDC42BPA-206ENST00000429440 NANOS2P60321 138 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-206ENST00000429440 DIRC1Q969H9 104 aa6.14□□□□□ -1.43
CDC42BPA-206ENST00000429440 CRYBG3Q68DQ2 2970 aa6.13□□□□□ -1.43
CDC42BPA-206ENST00000429440 IGHV3-73A0A0B4J1V6 119 aa6.13□□□□□ -1.43
CDC42BPA-206ENST00000429440 IGHV3-53P01767 116 aa6.13□□□□□ -1.43
CDC42BPA-206ENST00000429440 A8MU10 97 aa6.13□□□□□ -1.43
CDC42BPA-206ENST00000429440 LMO4P61968 165 aa6.13□□□□□ -1.43
CDC42BPA-206ENST00000429440 C7orf65Q6ZTY9 151 aa6.13□□□□□ -1.43
CDC42BPA-206ENST00000429440 CDC42SE2Q9NRR3 84 aa6.13□□□□□ -1.43
CDC42BPA-206ENST00000429440 MINOS1-NBL1R4GNA1 71 aa6.13□□□□□ -1.43
CDC42BPA-206ENST00000429440 RNASE1P07998 156 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-206ENST00000429440 LCA10Q71F78 164 aa6.12□□□□□ -1.43
CDC42BPA-206ENST00000429440 UTP20O75691 2785 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-206ENST00000429440 IGSF10Q6WRI0 2623 aa6.12□□□□□ -1.43
CDC42BPA-206ENST00000429440 LINC00575Q6W349 94 aa6.11□□□□□ -1.43
CDC42BPA-206ENST00000429440 Q6ZSN1 163 aa6.11□□□□□ -1.43
CDC42BPA-206ENST00000429440 MUC7Q8TAX7 377 aa6.11□□□□□ -1.43
CDC42BPA-206ENST00000429440 USP9XQ93008 2570 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-206ENST00000429440 G3V318 75 aa6.11□□□□□ -1.43
CDC42BPA-206ENST00000429440 LIMD2Q9BT23 127 aa6.11□□□□□ -1.43
CDC42BPA-206ENST00000429440 RHPN1-AS1Q9BWJ2 59 aa6.11□□□□□ -1.43
CDC42BPA-206ENST00000429440 IGKV4-1P06312 121 aa6.1□□□□□ -1.43
CDC42BPA-206ENST00000429440 SCXQ7RTU7 201 aa6.1□□□□□ -1.43
CDC42BPA-206ENST00000429440 SPATA3Q8NHX4 192 aa6.1□□□□□ -1.43
CDC42BPA-206ENST00000429440 ZCCHC13Q8WW36 166 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-206ENST00000429440 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
CDC42BPA-206ENST00000429440 SPG11Q96JI7 2443 aa6.09□□□□□ -1.43
CDC42BPA-206ENST00000429440 IGKV3-7A0A075B6H7 116 aa6.09□□□□□ -1.43
CDC42BPA-206ENST00000429440 CHKB-CPT1BH3BT56 60 aa6.09□□□□□ -1.43
CDC42BPA-206ENST00000429440 DEFB114Q30KQ6 69 aa6.09□□□□□ -1.43
CDC42BPA-206ENST00000429440 SORL1Q92673 2214 aa6.09□□□□□ -1.43
CDC42BPA-206ENST00000429440 SPTSSBQ8NFR3 76 aa6.08□□□□□ -1.44
CDC42BPA-206ENST00000429440 TOMM7Q9P0U1 55 aa6.08□□□□□ -1.44
CDC42BPA-206ENST00000429440 EPG5Q9HCE0 2579 aa6.08□□□□□ -1.44
CDC42BPA-206ENST00000429440 DOPEY1Q5JWR5 2465 aa6.08□□□□□ -1.44
CDC42BPA-206ENST00000429440 SPINK13Q1W4C9 94 aa6.07□□□□□ -1.44
CDC42BPA-206ENST00000429440 ZANQ9Y493 2812 aa6.06□□□□□ -1.44
CDC42BPA-206ENST00000429440 FBN2P35556 2912 aa6.06□□□□□ -1.44
CDC42BPA-206ENST00000429440 C6orf99Q4VX62 202 aa6.06□□□□□ -1.44
CDC42BPA-206ENST00000429440 C5orf56Q8N8D9 126 aa6.06□□□□□ -1.44
CDC42BPA-206ENST00000429440 LINC01006Q8NI28 216 aa6.05□□□□□ -1.44
CDC42BPA-206ENST00000429440 ESM1Q9NQ30 184 aa6.05□□□□□ -1.44
CDC42BPA-206ENST00000429440 DOPEY2Q9Y3R5 2298 aa6.05□□□□□ -1.44
CDC42BPA-206ENST00000429440 NDUFB1O75438 58 aa6.05□□□□□ -1.44
CDC42BPA-206ENST00000429440 Q75L30 129 aa6.05□□□□□ -1.44
CDC42BPA-206ENST00000429440 Q8N9P0 234 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-206ENST00000429440 USMG5Q96IX5 58 aa6.05□□□□□ -1.44
CDC42BPA-206ENST00000429440 IGHV3OR16-9A0A0B4J2B5 98 aa6.04□□□□□ -1.44
CDC42BPA-206ENST00000429440 IGHV4-61A0A0C4DH41 118 aa6.04□□□□□ -1.44
CDC42BPA-206ENST00000429440 IGKV3-20P01619 116 aa6.04□□□□□ -1.44
CDC42BPA-206ENST00000429440 ELOF1P60002 83 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-206ENST00000429440 MYO18BQ8IUG5 2567 aa6.04□□□□□ -1.44
CDC42BPA-206ENST00000429440 COX7BP24311 80 aa6.04□□□□□ -1.44
CDC42BPA-206ENST00000429440 NKAPP1Q8N9T2 125 aa6.04□□□□□ -1.44
CDC42BPA-206ENST00000429440 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
CDC42BPA-206ENST00000429440 ACACBO00763 2458 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms