RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 CCL18P55774 89 aa6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 LYRM7Q5U5X0 104 aa6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 MTURNQ8N3F0 131 aa6.41□□□□□ -1.38
HMGCLL1-206ENST00000428842 TRAV8-3A0A0A6YYJ7 113 aa6.41□□□□□ -1.38
HMGCLL1-206ENST00000428842 MRPS36P82909 103 aaKnown RBP6.41□□□□□ -1.38
HMGCLL1-206ENST00000428842 C5orf38Q86SI9 138 aa6.41□□□□□ -1.38
HMGCLL1-206ENST00000428842 C15orf53Q8NAA6 179 aa6.41□□□□□ -1.38
HMGCLL1-206ENST00000428842 LOC107984156A0A0G2JMH3 177 aa6.4□□□□□ -1.38
HMGCLL1-206ENST00000428842 GAGE12HA6NDE8 117 aa6.4□□□□□ -1.38
HMGCLL1-206ENST00000428842 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
HMGCLL1-206ENST00000428842 PSMB2P49721 201 aa6.4□□□□□ -1.38
HMGCLL1-206ENST00000428842 REG3AQ06141 175 aa6.4□□□□□ -1.38
HMGCLL1-206ENST00000428842 ARL17AQ8IVW1 177 aa6.4□□□□□ -1.38
HMGCLL1-206ENST00000428842 PRO1854Q9UHT4 67 aa6.4□□□□□ -1.38
HMGCLL1-206ENST00000428842 TRBV20-1A0A075B6N2 111 aa6.4□□□□□ -1.39
HMGCLL1-206ENST00000428842 A0A0B4J2C4 111 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 TCL1BO95988 128 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 SCGB1A1P11684 91 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 LINC00242Q5T6M2 205 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 SIGMAR1Q99720 223 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 CDKN2A-AS1Q9UH64 79 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 A0A0J9YXY3 114 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 A4D1N5 150 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 FOXI1Q12951 378 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 TMEM101Q96IK0 257 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 SPANXA1Q9NS26 97 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 FAT2Q9NYQ8 4349 aa6.39□□□□□ -1.39
HMGCLL1-206ENST00000428842 LINC00959A0A1B0GUT2 108 aa6.38□□□□□ -1.39
HMGCLL1-206ENST00000428842 TINCRA0A1B0GVN0 87 aa6.38□□□□□ -1.39
HMGCLL1-206ENST00000428842 SPINK8P0C7L1 97 aa6.38□□□□□ -1.39
HMGCLL1-206ENST00000428842 SFTA2Q6UW10 78 aa6.38□□□□□ -1.39
HMGCLL1-206ENST00000428842 MUSTN1Q8IVN3 82 aa6.38□□□□□ -1.39
HMGCLL1-206ENST00000428842 LITAFQ99732 161 aa6.38□□□□□ -1.39
HMGCLL1-206ENST00000428842 TIMM21Q9BVV7 248 aa6.38□□□□□ -1.39
HMGCLL1-206ENST00000428842 IGHV1-58A0A0C4DH39 117 aa6.37□□□□□ -1.39
HMGCLL1-206ENST00000428842 ALMS1Q8TCU4 4167 aa6.37□□□□□ -1.39
HMGCLL1-206ENST00000428842 IGKV2D-24A0A075B6R9 120 aa6.37□□□□□ -1.39
HMGCLL1-206ENST00000428842 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.37□□□□□ -1.39
HMGCLL1-206ENST00000428842 M0QXV9 152 aa6.36□□□□□ -1.39
HMGCLL1-206ENST00000428842 CHCHD10Q8WYQ3 142 aaPredicted RBP6.36□□□□□ -1.39
HMGCLL1-206ENST00000428842 SPANXDQ9BXN6 97 aa6.36□□□□□ -1.39
HMGCLL1-206ENST00000428842 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
HMGCLL1-206ENST00000428842 A0A1B0GUV1 79 aa6.36□□□□□ -1.39
HMGCLL1-206ENST00000428842 TEN1Q86WV5 123 aa6.36□□□□□ -1.39
HMGCLL1-206ENST00000428842 CARD19Q96LW7 228 aa6.36□□□□□ -1.39
HMGCLL1-206ENST00000428842 PKD1P98161 4303 aa6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 DNAH10OSP0CZ25 163 aa6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 LINC01556Q5JQF7 62 aa6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 PPDPFLQ8WWR9 84 aa6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 ZNF625Q96I27 306 aaPredicted RBP6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 ERG28Q9UKR5 140 aa6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 IGLV5-45A0A087WSX0 123 aa6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 HIGD2BQ4VC39 106 aa6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 C6orf223Q8N319 242 aa6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 TOMM7Q9P0U1 55 aa6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 CSDC2Q9Y534 153 aaKnown RBP6.35□□□□□ -1.39
HMGCLL1-206ENST00000428842 CRPP02741 224 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 SCGB1C2P0DMR2 95 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 TIRAPP58753 221 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 LINC01620Q4KN68 170 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 LINC00476Q8WZB0 136 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 LINC01600Q96MT4 127 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 NDUFA12Q9UI09 145 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 DNAH17Q9UFH2 4485 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 DNAH11Q96DT5 4516 aa6.34□□□□□ -1.39
HMGCLL1-206ENST00000428842 A0A0U1RRA0 63 aa6.34□□□□□ -1.4
HMGCLL1-206ENST00000428842 SMAGPQ0VAQ4 97 aa6.34□□□□□ -1.4
HMGCLL1-206ENST00000428842 ADAMTSL4-AS1Q5T5F5 129 aa6.34□□□□□ -1.4
HMGCLL1-206ENST00000428842 C2orf82Q6UX34 121 aa6.34□□□□□ -1.4
HMGCLL1-206ENST00000428842 GEMIN7Q9H840 131 aaKnown RBP6.34□□□□□ -1.4
HMGCLL1-206ENST00000428842 PRR34Q9NV39 138 aa6.34□□□□□ -1.4
HMGCLL1-206ENST00000428842 TRBV30A0A0K0K1B3 111 aa6.33□□□□□ -1.4
HMGCLL1-206ENST00000428842 TIMM17BO60830 172 aa6.33□□□□□ -1.4
HMGCLL1-206ENST00000428842 MIAQ16674 131 aa6.33□□□□□ -1.4
HMGCLL1-206ENST00000428842 FAM19A3Q7Z5A8 133 aa6.33□□□□□ -1.4
HMGCLL1-206ENST00000428842 IGHV3OR16-9A0A0B4J2B5 98 aa6.33□□□□□ -1.4
HMGCLL1-206ENST00000428842 KRTAP26-1Q6PEX3 210 aa6.33□□□□□ -1.4
HMGCLL1-206ENST00000428842 NBDYA0A0U1RRE5 68 aa6.32□□□□□ -1.4
HMGCLL1-206ENST00000428842 SLC25A20O43772 301 aa6.32□□□□□ -1.4
HMGCLL1-206ENST00000428842 ANKRD29Q8N6D5 301 aa6.32□□□□□ -1.4
HMGCLL1-206ENST00000428842 UPK3BQ9BT76 320 aa6.32□□□□□ -1.4
HMGCLL1-206ENST00000428842 H7C423 109 aa6.31□□□□□ -1.4
HMGCLL1-206ENST00000428842 SMIM1B2RUZ4 78 aa6.31□□□□□ -1.4
HMGCLL1-206ENST00000428842 NDUFA1O15239 70 aa6.31□□□□□ -1.4
HMGCLL1-206ENST00000428842 C9orf116Q5BN46 136 aaPredicted RBP6.31□□□□□ -1.4
HMGCLL1-206ENST00000428842 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 C9JAW5 83 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 H7C2G1 150 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 TRIAP1O43715 76 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 IFITM1P13164 125 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 SS18Q15532 418 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 ATXN8Q156A1 80 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 DNAH5Q8TE73 4624 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 IBA57-AS1B1ANH7 110 aa6.3□□□□□ -1.4
HMGCLL1-206ENST00000428842 Q1RN00 199 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms