RNA–Protein interactions for RNA: ENST00000428193.6

RPL28-203, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-203ENST00000428193 LINC01546A6NGU7 62 aa9.5□□□□□ -0.89
RPL28-203ENST00000428193 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
RPL28-203ENST00000428193 LINC01549A6NIU2 74 aa9.49□□□□□ -0.89
RPL28-203ENST00000428193 Q8IZM0 81 aa9.49□□□□□ -0.89
RPL28-203ENST00000428193 C18orf32Q8TCD1 76 aa9.48□□□□□ -0.89
RPL28-203ENST00000428193 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
RPL28-203ENST00000428193 NDUFA6P56556 154 aa9.47□□□□□ -0.89
RPL28-203ENST00000428193 PMVKQ15126 192 aa9.47□□□□□ -0.89
RPL28-203ENST00000428193 CST9LQ9H4G1 147 aa9.47□□□□□ -0.89
RPL28-203ENST00000428193 PSORS1C2Q9UIG4 136 aa9.47□□□□□ -0.89
RPL28-203ENST00000428193 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.9
RPL28-203ENST00000428193 PMCHL1Q16048 86 aa9.46□□□□□ -0.9
RPL28-203ENST00000428193 URB1-AS1Q96HZ7 61 aa9.46□□□□□ -0.9
RPL28-203ENST00000428193 SMIM1B2RUZ4 78 aa9.45□□□□□ -0.9
RPL28-203ENST00000428193 SPINK8P0C7L1 97 aa9.45□□□□□ -0.9
RPL28-203ENST00000428193 LINC00614P0C842 121 aa9.45□□□□□ -0.9
RPL28-203ENST00000428193 MT1HL1P0DM35 61 aa9.45□□□□□ -0.9
RPL28-203ENST00000428193 C1orf137Q5JT78 98 aa9.45□□□□□ -0.9
RPL28-203ENST00000428193 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
RPL28-203ENST00000428193 A0A096LNJ9 63 aa9.44□□□□□ -0.9
RPL28-203ENST00000428193 M0QXV9 152 aa9.44□□□□□ -0.9
RPL28-203ENST00000428193 HBDP02042 147 aa9.44□□□□□ -0.9
RPL28-203ENST00000428193 C9orf129Q5T035 196 aaKnown RBP9.44□□□□□ -0.9
RPL28-203ENST00000428193 F8VRH5 84 aa9.43□□□□□ -0.9
RPL28-203ENST00000428193 UBE2BP63146 152 aa9.43□□□□□ -0.9
RPL28-203ENST00000428193 SERTAD4-AS1Q5TG53 156 aa9.43□□□□□ -0.9
RPL28-203ENST00000428193 COX7B2Q8TF08 81 aa9.43□□□□□ -0.9
RPL28-203ENST00000428193 IGLV5-45A0A087WSX0 123 aa9.42□□□□□ -0.9
RPL28-203ENST00000428193 CXCL5P42830 114 aa9.42□□□□□ -0.9
RPL28-203ENST00000428193 RAB5BP61020 215 aa9.42□□□□□ -0.9
RPL28-203ENST00000428193 PDZD11Q5EBL8 140 aa9.42□□□□□ -0.9
RPL28-203ENST00000428193 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
RPL28-203ENST00000428193 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
RPL28-203ENST00000428193 XAGE1AQ9HD64 81 aa9.42□□□□□ -0.9
RPL28-203ENST00000428193 SRSF9Q13242 221 aaKnown RBP eCLIP9.41□□□□□ -0.9
RPL28-203ENST00000428193 KRTAP11-1Q8IUC1 163 aa9.41□□□□□ -0.9
RPL28-203ENST00000428193 CBLN2Q8IUK8 224 aa9.41□□□□□ -0.9
RPL28-203ENST00000428193 H3BRM9 83 aa9.4□□□□□ -0.9
RPL28-203ENST00000428193 LINC01600Q96MT4 127 aa9.39□□□□□ -0.91
RPL28-203ENST00000428193 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
RPL28-203ENST00000428193 ATP5LO75964 103 aa9.38□□□□□ -0.91
RPL28-203ENST00000428193 IGLC3P0DOY3 106 aa9.38□□□□□ -0.91
RPL28-203ENST00000428193 SLC7A5P1Q8MH63 180 aa9.38□□□□□ -0.91
RPL28-203ENST00000428193 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
RPL28-203ENST00000428193 IGLV7-43P04211 117 aa9.37□□□□□ -0.91
RPL28-203ENST00000428193 ZNF22P17026 224 aaPredicted RBP9.37□□□□□ -0.91
RPL28-203ENST00000428193 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
RPL28-203ENST00000428193 TNXBP22105 4242 aa9.35□□□□□ -0.91
RPL28-203ENST00000428193 ODF1Q14990 250 aa9.35□□□□□ -0.91
RPL28-203ENST00000428193 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
RPL28-203ENST00000428193 C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
RPL28-203ENST00000428193 TMEM170BQ5T4T1 132 aa9.34□□□□□ -0.91
RPL28-203ENST00000428193 CHCHD1Q96BP2 118 aaKnown RBP9.34□□□□□ -0.91
RPL28-203ENST00000428193 DIRC1Q969H9 104 aa9.33□□□□□ -0.92
RPL28-203ENST00000428193 CHTOPQ9Y3Y2 248 aaKnown RBP9.33□□□□□ -0.92
RPL28-203ENST00000428193 HMCN2Q8NDA2 5059 aa9.33□□□□□ -0.92
RPL28-203ENST00000428193 HSBP1O75506 76 aa9.32□□□□□ -0.92
RPL28-203ENST00000428193 TRGC2P03986 189 aa9.32□□□□□ -0.92
RPL28-203ENST00000428193 PFN2P35080 140 aa9.32□□□□□ -0.92
RPL28-203ENST00000428193 LBHQ53QV2 105 aaPredicted RBP9.32□□□□□ -0.92
RPL28-203ENST00000428193 IGLV5-39A0A0G2JS06 123 aa9.31□□□□□ -0.92
RPL28-203ENST00000428193 FAM19A2Q8N3H0 131 aa9.31□□□□□ -0.92
RPL28-203ENST00000428193 IFI27L1Q96BM0 104 aa9.31□□□□□ -0.92
RPL28-203ENST00000428193 ZNF625Q96I27 306 aaPredicted RBP9.31□□□□□ -0.92
RPL28-203ENST00000428193 KRTAP10-8P60410 259 aa9.3□□□□□ -0.92
RPL28-203ENST00000428193 MRPL55Q7Z7F7 128 aaKnown RBP9.3□□□□□ -0.92
RPL28-203ENST00000428193 GAGE10A6NGK3 116 aa9.29□□□□□ -0.92
RPL28-203ENST00000428193 H0Y9J4 135 aa9.29□□□□□ -0.92
RPL28-203ENST00000428193 RPL37AP8A6NKH3 93 aa9.28□□□□□ -0.92
RPL28-203ENST00000428193 H0Y8G0 127 aa9.28□□□□□ -0.92
RPL28-203ENST00000428193 ERG28Q9UKR5 140 aa9.28□□□□□ -0.92
RPL28-203ENST00000428193 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
RPL28-203ENST00000428193 LINC00167Q96N53 147 aa9.27□□□□□ -0.93
RPL28-203ENST00000428193 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
RPL28-203ENST00000428193 TRAV12-1A0A0B4J245 112 aa9.26□□□□□ -0.93
RPL28-203ENST00000428193 NUPR1O60356 82 aa9.26□□□□□ -0.93
RPL28-203ENST00000428193 PRR26Q8N8Z3 221 aa9.26□□□□□ -0.93
RPL28-203ENST00000428193 SCO1O75880 301 aa9.25□□□□□ -0.93
RPL28-203ENST00000428193 SERF1AO75920 110 aa9.25□□□□□ -0.93
RPL28-203ENST00000428193 TMEM223A0PJW6 202 aa9.24□□□□□ -0.93
RPL28-203ENST00000428193 SND1-IT1Q9HBX3 110 aa9.24□□□□□ -0.93
RPL28-203ENST00000428193 A0A0U1RRA0 63 aa9.23□□□□□ -0.93
RPL28-203ENST00000428193 ZNF861PO60384 105 aa9.23□□□□□ -0.93
RPL28-203ENST00000428193 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
RPL28-203ENST00000428193 LINC00310P59036 64 aa9.23□□□□□ -0.93
RPL28-203ENST00000428193 IGLV5-37A0A075B6J1 123 aa9.22□□□□□ -0.93
RPL28-203ENST00000428193 COLCA2A8K830 154 aa9.22□□□□□ -0.93
RPL28-203ENST00000428193 BCE1O60756 84 aa9.22□□□□□ -0.93
RPL28-203ENST00000428193 LINC00158P58513 81 aa9.22□□□□□ -0.93
RPL28-203ENST00000428193 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
RPL28-203ENST00000428193 IGKV2-28A0A075B6P5 120 aa9.21□□□□□ -0.94
RPL28-203ENST00000428193 IGKV2D-28P01615 120 aa9.21□□□□□ -0.94
RPL28-203ENST00000428193 FABP4P15090 132 aa9.21□□□□□ -0.94
RPL28-203ENST00000428193 COX17Q14061 63 aa9.21□□□□□ -0.94
RPL28-203ENST00000428193 KRTAP1-4P0C5Y4 121 aa9.2□□□□□ -0.94
RPL28-203ENST00000428193 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
RPL28-203ENST00000428193 VPREB1P12018 145 aa9.19□□□□□ -0.94
RPL28-203ENST00000428193 RPL24P83731 157 aaKnown RBP9.19□□□□□ -0.94
RPL28-203ENST00000428193 MEIG1Q5JSS6 88 aa9.19□□□□□ -0.94
RPL28-203ENST00000428193 UBE2AP49459 152 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms