RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 IGLV1-50A0A075B6I6 118 aa12.55□□□□□ -0.4
UBXN4-204ENST00000426921 C6orf226Q5I0X4 101 aa12.55□□□□□ -0.4
UBXN4-204ENST00000426921 ALKBH7Q9BT30 221 aaPredicted RBP12.55□□□□□ -0.4
UBXN4-204ENST00000426921 TRAV9-1A0A075B6T8 112 aa12.54□□□□□ -0.4
UBXN4-204ENST00000426921 ADCYAP1P18509 176 aa12.54□□□□□ -0.4
UBXN4-204ENST00000426921 LPAP08519 4548 aa12.54□□□□□ -0.4
UBXN4-204ENST00000426921 F8VRH5 84 aa12.52□□□□□ -0.41
UBXN4-204ENST00000426921 ERASQ7Z444 233 aa12.52□□□□□ -0.41
UBXN4-204ENST00000426921 GEMIN7Q9H840 131 aaKnown RBP12.52□□□□□ -0.41
UBXN4-204ENST00000426921 CXCL5P42830 114 aa12.51□□□□□ -0.41
UBXN4-204ENST00000426921 KIAA1644Q3SXP7 199 aa12.51□□□□□ -0.41
UBXN4-204ENST00000426921 UQCC3Q6UW78 93 aa12.51□□□□□ -0.41
UBXN4-204ENST00000426921 LINC01546A6NGU7 62 aa12.5□□□□□ -0.41
UBXN4-204ENST00000426921 LINC00469Q8N7U9 141 aa12.5□□□□□ -0.41
UBXN4-204ENST00000426921 C22orf24Q9Y442 160 aa12.5□□□□□ -0.41
UBXN4-204ENST00000426921 IGLV5-45A0A087WSX0 123 aa12.49□□□□□ -0.41
UBXN4-204ENST00000426921 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
UBXN4-204ENST00000426921 LINC01549A6NIU2 74 aa12.49□□□□□ -0.41
UBXN4-204ENST00000426921 SMIM1B2RUZ4 78 aa12.49□□□□□ -0.41
UBXN4-204ENST00000426921 NUPR1O60356 82 aa12.49□□□□□ -0.41
UBXN4-204ENST00000426921 XAGE1AQ9HD64 81 aa12.49□□□□□ -0.41
UBXN4-204ENST00000426921 TP73-AS1Q9UF72 201 aa12.49□□□□□ -0.41
UBXN4-204ENST00000426921 ZNF861PO60384 105 aa12.48□□□□□ -0.41
UBXN4-204ENST00000426921 SCGB3A1Q96QR1 104 aa12.48□□□□□ -0.41
UBXN4-204ENST00000426921 TINCRA0A1B0GVN0 87 aa12.47□□□□□ -0.41
UBXN4-204ENST00000426921 RPL13AP40429 203 aaKnown RBP12.47□□□□□ -0.41
UBXN4-204ENST00000426921 LBHQ53QV2 105 aaPredicted RBP12.47□□□□□ -0.41
UBXN4-204ENST00000426921 GNB1LQ9BYB4 327 aa12.47□□□□□ -0.41
UBXN4-204ENST00000426921 PDZD11Q5EBL8 140 aa12.46□□□□□ -0.41
UBXN4-204ENST00000426921 CARHSP1Q9Y2V2 147 aaKnown RBP12.46□□□□□ -0.41
UBXN4-204ENST00000426921 MRPL55Q7Z7F7 128 aaKnown RBP12.44□□□□□ -0.42
UBXN4-204ENST00000426921 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
UBXN4-204ENST00000426921 COX7B2Q8TF08 81 aa12.43□□□□□ -0.42
UBXN4-204ENST00000426921 CST9LQ9H4G1 147 aa12.43□□□□□ -0.42
UBXN4-204ENST00000426921 S100PP25815 95 aa12.42□□□□□ -0.42
UBXN4-204ENST00000426921 IFITM2Q01629 132 aa12.41□□□□□ -0.42
UBXN4-204ENST00000426921 COX19Q49B96 90 aa12.41□□□□□ -0.42
UBXN4-204ENST00000426921 BCE1O60756 84 aa12.39□□□□□ -0.43
UBXN4-204ENST00000426921 PMVKQ15126 192 aa12.39□□□□□ -0.43
UBXN4-204ENST00000426921 IGLV5-37A0A075B6J1 123 aa12.38□□□□□ -0.43
UBXN4-204ENST00000426921 SPINK8P0C7L1 97 aa12.37□□□□□ -0.43
UBXN4-204ENST00000426921 RPL28P46779 137 aaKnown RBP12.37□□□□□ -0.43
UBXN4-204ENST00000426921 FA2HQ7L5A8 372 aa12.37□□□□□ -0.43
UBXN4-204ENST00000426921 LINC00167Q96N53 147 aa12.37□□□□□ -0.43
UBXN4-204ENST00000426921 MRPL18Q9H0U6 180 aaKnown RBP12.37□□□□□ -0.43
UBXN4-204ENST00000426921 C10orf91Q5T1B1 145 aa12.35□□□□□ -0.43
UBXN4-204ENST00000426921 SMCO4Q9NRQ5 59 aa12.35□□□□□ -0.43
UBXN4-204ENST00000426921 H3BRM9 83 aa12.34□□□□□ -0.43
UBXN4-204ENST00000426921 A0A096LNJ9 63 aa12.33□□□□□ -0.44
UBXN4-204ENST00000426921 IGLV5-39A0A0G2JS06 123 aa12.33□□□□□ -0.44
UBXN4-204ENST00000426921 IGLC3P0DOY3 106 aa12.33□□□□□ -0.44
UBXN4-204ENST00000426921 FABP9Q0Z7S8 132 aa12.33□□□□□ -0.44
UBXN4-204ENST00000426921 RHEBQ15382 184 aa12.33□□□□□ -0.44
UBXN4-204ENST00000426921 A0A087X002 238 aa12.32□□□□□ -0.44
UBXN4-204ENST00000426921 RPL37AP8A6NKH3 93 aa12.32□□□□□ -0.44
UBXN4-204ENST00000426921 KRTAP13-1Q8IUC0 172 aa12.32□□□□□ -0.44
UBXN4-204ENST00000426921 ATP5LO75964 103 aa12.31□□□□□ -0.44
UBXN4-204ENST00000426921 RAB5BP61020 215 aa12.31□□□□□ -0.44
UBXN4-204ENST00000426921 COMMD7Q86VX2 200 aa12.31□□□□□ -0.44
UBXN4-204ENST00000426921 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
UBXN4-204ENST00000426921 PRR4Q16378 134 aa12.29□□□□□ -0.44
UBXN4-204ENST00000426921 NKAPP1Q8N9T2 125 aa12.29□□□□□ -0.44
UBXN4-204ENST00000426921 URB1-AS1Q96HZ7 61 aa12.29□□□□□ -0.44
UBXN4-204ENST00000426921 CRYGAP11844 174 aa12.28□□□□□ -0.44
UBXN4-204ENST00000426921 ZNF22P17026 224 aaPredicted RBP12.28□□□□□ -0.44
UBXN4-204ENST00000426921 RPS10P5Q9NQ39 176 aa12.28□□□□□ -0.44
UBXN4-204ENST00000426921 C18orf32Q8TCD1 76 aa12.27□□□□□ -0.45
UBXN4-204ENST00000426921 HBDP02042 147 aa12.25□□□□□ -0.45
UBXN4-204ENST00000426921 LINC00614P0C842 121 aa12.25□□□□□ -0.45
UBXN4-204ENST00000426921 PFN2P35080 140 aa12.24□□□□□ -0.45
UBXN4-204ENST00000426921 COX17Q14061 63 aa12.24□□□□□ -0.45
UBXN4-204ENST00000426921 TYMSOSQ8TAI1 123 aa12.24□□□□□ -0.45
UBXN4-204ENST00000426921 ERG28Q9UKR5 140 aa12.24□□□□□ -0.45
UBXN4-204ENST00000426921 VPREB1P12018 145 aa12.23□□□□□ -0.45
UBXN4-204ENST00000426921 UBE2AP49459 152 aa12.23□□□□□ -0.45
UBXN4-204ENST00000426921 NDUFA6P56556 154 aa12.23□□□□□ -0.45
UBXN4-204ENST00000426921 SND1-IT1Q9HBX3 110 aa12.23□□□□□ -0.45
UBXN4-204ENST00000426921 MUC2Q02817 5179 aa12.22□□□□□ -0.45
UBXN4-204ENST00000426921 IGKV2-28A0A075B6P5 120 aa12.22□□□□□ -0.45
UBXN4-204ENST00000426921 SCO1O75880 301 aa12.22□□□□□ -0.45
UBXN4-204ENST00000426921 IGKV2D-28P01615 120 aa12.22□□□□□ -0.45
UBXN4-204ENST00000426921 FAM229BQ4G0N7 80 aa12.22□□□□□ -0.45
UBXN4-204ENST00000426921 TRAPPC1Q9Y5R8 145 aa12.22□□□□□ -0.45
UBXN4-204ENST00000426921 TSPAN13O95857 204 aa12.21□□□□□ -0.45
UBXN4-204ENST00000426921 KRTAP13-2Q52LG2 175 aa12.21□□□□□ -0.45
UBXN4-204ENST00000426921 SFTA2Q6UW10 78 aa12.21□□□□□ -0.45
UBXN4-204ENST00000426921 C11orf86A6NJI1 115 aa12.2□□□□□ -0.46
UBXN4-204ENST00000426921 PMCHL1Q16048 86 aa12.2□□□□□ -0.46
UBXN4-204ENST00000426921 ANAPC11Q9NYG5 84 aa12.2□□□□□ -0.46
UBXN4-204ENST00000426921 RPL24P83731 157 aaKnown RBP12.18□□□□□ -0.46
UBXN4-204ENST00000426921 ZNF625Q96I27 306 aaPredicted RBP12.18□□□□□ -0.46
UBXN4-204ENST00000426921 TMEM126AQ9H061 195 aa12.18□□□□□ -0.46
UBXN4-204ENST00000426921 BAGE3Q86Y29 109 aa12.17□□□□□ -0.46
UBXN4-204ENST00000426921 Q8NDZ9 215 aa12.17□□□□□ -0.46
UBXN4-204ENST00000426921 PRLHP81277 87 aa12.16□□□□□ -0.46
UBXN4-204ENST00000426921 TMEM238C9JI98 176 aa12.15□□□□□ -0.46
UBXN4-204ENST00000426921 M0R378 163 aa12.15□□□□□ -0.46
UBXN4-204ENST00000426921 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
UBXN4-204ENST00000426921 FAM19A1Q7Z5A9 133 aa12.14□□□□□ -0.47
UBXN4-204ENST00000426921 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms