RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 VCX2Q9H322 139 aa8.33□□□□□ -1.08
SMIM12-203ENST00000426886 SMIM20Q8N5G0 67 aa8.33□□□□□ -1.08
SMIM12-203ENST00000426886 RMI2Q96E14 147 aa8.32□□□□□ -1.08
SMIM12-203ENST00000426886 LRCOL1A6NCL2 159 aa8.32□□□□□ -1.08
SMIM12-203ENST00000426886 C16orf90A8MZG2 172 aa8.32□□□□□ -1.08
SMIM12-203ENST00000426886 IGKCP01834 107 aa8.32□□□□□ -1.08
SMIM12-203ENST00000426886 PRR34Q9NV39 138 aa8.32□□□□□ -1.08
SMIM12-203ENST00000426886 LRP1BQ9NZR2 4599 aa8.31□□□□□ -1.08
SMIM12-203ENST00000426886 MIAQ16674 131 aa8.31□□□□□ -1.08
SMIM12-203ENST00000426886 PPDPFLQ8WWR9 84 aa8.31□□□□□ -1.08
SMIM12-203ENST00000426886 TMEM101Q96IK0 257 aa8.31□□□□□ -1.08
SMIM12-203ENST00000426886 CARD19Q96LW7 228 aa8.31□□□□□ -1.08
SMIM12-203ENST00000426886 RPL39P62891 51 aaKnown RBP8.31□□□□□ -1.08
SMIM12-203ENST00000426886 RNASE13Q5GAN3 156 aaKnown RBP8.31□□□□□ -1.08
SMIM12-203ENST00000426886 DGAT2L7PQ6IED9 249 aa8.31□□□□□ -1.08
SMIM12-203ENST00000426886 KIAA1109Q2LD37 5005 aa8.3□□□□□ -1.08
SMIM12-203ENST00000426886 ZC2HC1BQ5TFG8 222 aa8.3□□□□□ -1.08
SMIM12-203ENST00000426886 MAP1LC3AQ9H492 121 aa8.3□□□□□ -1.08
SMIM12-203ENST00000426886 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.3□□□□□ -1.08
SMIM12-203ENST00000426886 A4D1N5 150 aa8.3□□□□□ -1.08
SMIM12-203ENST00000426886 H7C423 109 aa8.3□□□□□ -1.08
SMIM12-203ENST00000426886 HIST1H4GQ99525 98 aa8.3□□□□□ -1.08
SMIM12-203ENST00000426886 TEN1Q86WV5 123 aa8.29□□□□□ -1.08
SMIM12-203ENST00000426886 DPM2O94777 84 aa8.29□□□□□ -1.08
SMIM12-203ENST00000426886 LINC01546A6NGU7 62 aa8.28□□□□□ -1.08
SMIM12-203ENST00000426886 PRSS1P07477 247 aa8.28□□□□□ -1.08
SMIM12-203ENST00000426886 Q8N814 137 aa8.28□□□□□ -1.08
SMIM12-203ENST00000426886 UBE2D4Q9Y2X8 147 aa8.28□□□□□ -1.08
SMIM12-203ENST00000426886 CCDC179H3BU77 68 aa8.27□□□□□ -1.09
SMIM12-203ENST00000426886 NDUFV3P56181 108 aaKnown RBP8.27□□□□□ -1.09
SMIM12-203ENST00000426886 CDC42SE2Q9NRR3 84 aa8.27□□□□□ -1.09
SMIM12-203ENST00000426886 OPRPNQ99935 248 aaPredicted RBP8.27□□□□□ -1.09
SMIM12-203ENST00000426886 ATP5LO75964 103 aa8.26□□□□□ -1.09
SMIM12-203ENST00000426886 Q8N8P6 123 aa8.26□□□□□ -1.09
SMIM12-203ENST00000426886 PSMB2P49721 201 aa8.26□□□□□ -1.09
SMIM12-203ENST00000426886 IGLV5-52A0A0A0MRZ9 124 aa8.25□□□□□ -1.09
SMIM12-203ENST00000426886 TRAV8-4A0A0B4J246 113 aa8.25□□□□□ -1.09
SMIM12-203ENST00000426886 XCL1P47992 114 aa8.25□□□□□ -1.09
SMIM12-203ENST00000426886 KRTAP26-1Q6PEX3 210 aa8.25□□□□□ -1.09
SMIM12-203ENST00000426886 CHCHD10Q8WYQ3 142 aaPredicted RBP8.25□□□□□ -1.09
SMIM12-203ENST00000426886 TRAV13-1A0A0B4J241 112 aa8.25□□□□□ -1.09
SMIM12-203ENST00000426886 USP17L23D6RBM5 183 aa8.25□□□□□ -1.09
SMIM12-203ENST00000426886 LINC01620Q4KN68 170 aa8.25□□□□□ -1.09
SMIM12-203ENST00000426886 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
SMIM12-203ENST00000426886 GAGE2EQ4V326 116 aa8.24□□□□□ -1.09
SMIM12-203ENST00000426886 GAGE2DQ9UEU5 116 aa8.24□□□□□ -1.09
SMIM12-203ENST00000426886 LINC00959A0A1B0GUT2 108 aa8.24□□□□□ -1.09
SMIM12-203ENST00000426886 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
SMIM12-203ENST00000426886 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
SMIM12-203ENST00000426886 MYMXA0A1B0GTQ4 84 aa8.23□□□□□ -1.09
SMIM12-203ENST00000426886 NXT2Q9NPJ8 142 aaKnown RBP8.23□□□□□ -1.09
SMIM12-203ENST00000426886 MRPL35Q9NZE8 188 aaKnown RBP8.23□□□□□ -1.09
SMIM12-203ENST00000426886 LINC01549A6NIU2 74 aa8.23□□□□□ -1.09
SMIM12-203ENST00000426886 IFITM1P13164 125 aa8.23□□□□□ -1.09
SMIM12-203ENST00000426886 LOC107984156A0A0G2JMH3 177 aa8.22□□□□□ -1.09
SMIM12-203ENST00000426886 C2orf66Q6UXQ4 117 aa8.22□□□□□ -1.09
SMIM12-203ENST00000426886 ARL17AQ8IVW1 177 aa8.22□□□□□ -1.09
SMIM12-203ENST00000426886 SS18Q15532 418 aa8.22□□□□□ -1.09
SMIM12-203ENST00000426886 Q6Q795 121 aa8.22□□□□□ -1.09
SMIM12-203ENST00000426886 CSDC2Q9Y534 153 aaKnown RBP8.22□□□□□ -1.09
SMIM12-203ENST00000426886 UBE2D1P51668 147 aa8.21□□□□□ -1.09
SMIM12-203ENST00000426886 ORMDL2Q53FV1 153 aa8.21□□□□□ -1.09
SMIM12-203ENST00000426886 FAM104AQ969W3 186 aa8.21□□□□□ -1.09
SMIM12-203ENST00000426886 SNCGO76070 127 aa8.21□□□□□ -1.1
SMIM12-203ENST00000426886 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
SMIM12-203ENST00000426886 LYRM7Q5U5X0 104 aa8.21□□□□□ -1.1
SMIM12-203ENST00000426886 ANKRD29Q8N6D5 301 aa8.21□□□□□ -1.1
SMIM12-203ENST00000426886 TIMM21Q9BVV7 248 aa8.2□□□□□ -1.1
SMIM12-203ENST00000426886 TCL1BO95988 128 aa8.2□□□□□ -1.1
SMIM12-203ENST00000426886 PLNP26678 52 aa8.2□□□□□ -1.1
SMIM12-203ENST00000426886 SFTA2Q6UW10 78 aa8.2□□□□□ -1.1
SMIM12-203ENST00000426886 HIGD2BQ4VC39 106 aa8.19□□□□□ -1.1
SMIM12-203ENST00000426886 APOBP04114 4563 aaKnown RBP8.19□□□□□ -1.1
SMIM12-203ENST00000426886 RYR1P21817 5038 aa8.19□□□□□ -1.1
SMIM12-203ENST00000426886 HAMPP81172 84 aa8.19□□□□□ -1.1
SMIM12-203ENST00000426886 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
SMIM12-203ENST00000426886 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
SMIM12-203ENST00000426886 C14orf177Q52M58 125 aa8.18□□□□□ -1.1
SMIM12-203ENST00000426886 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
SMIM12-203ENST00000426886 LINC00526Q96FQ7 95 aa8.17□□□□□ -1.1
SMIM12-203ENST00000426886 M0QXV9 152 aa8.17□□□□□ -1.1
SMIM12-203ENST00000426886 CD164L2Q6UWJ8 174 aa8.17□□□□□ -1.1
SMIM12-203ENST00000426886 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
SMIM12-203ENST00000426886 TMEM141Q96I45 108 aa8.17□□□□□ -1.1
SMIM12-203ENST00000426886 PPDPFQ9H3Y8 114 aa8.17□□□□□ -1.1
SMIM12-203ENST00000426886 PYGO1Q9Y3Y4 419 aa8.17□□□□□ -1.1
SMIM12-203ENST00000426886 SCGB1C2P0DMR2 95 aa8.16□□□□□ -1.1
SMIM12-203ENST00000426886 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
SMIM12-203ENST00000426886 MEIG1Q5JSS6 88 aa8.16□□□□□ -1.1
SMIM12-203ENST00000426886 HERC2O95714 4834 aa8.16□□□□□ -1.1
SMIM12-203ENST00000426886 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
SMIM12-203ENST00000426886 F8VRH5 84 aa8.16□□□□□ -1.1
SMIM12-203ENST00000426886 MALP21145 153 aa8.16□□□□□ -1.1
SMIM12-203ENST00000426886 TOMM6Q96B49 74 aa8.16□□□□□ -1.1
SMIM12-203ENST00000426886 SCGB3A1Q96QR1 104 aa8.16□□□□□ -1.1
SMIM12-203ENST00000426886 TMEM126AQ9H061 195 aa8.16□□□□□ -1.1
SMIM12-203ENST00000426886 HSPG2P98160 4391 aa8.15□□□□□ -1.1
SMIM12-203ENST00000426886 TRAV12-1A0A0B4J245 112 aa8.15□□□□□ -1.1
SMIM12-203ENST00000426886 FAM30AQ9NZY2 134 aa8.15□□□□□ -1.1
SMIM12-203ENST00000426886 SLPIP03973 132 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms