RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 FAM236CP0DP71 79 aa14□□□□□ -0.17
HCG18-235ENST00000426882 C4orf48Q5BLP8 95 aa13.99□□□□□ -0.17
HCG18-235ENST00000426882 C11orf72Q8NBR9 251 aa13.99□□□□□ -0.17
HCG18-235ENST00000426882 CHKB-CPT1BH3BT56 60 aa13.99□□□□□ -0.17
HCG18-235ENST00000426882 A0A087WYN8 130 aa13.98□□□□□ -0.17
HCG18-235ENST00000426882 NTM-AS1Q6ZSK4 140 aa13.98□□□□□ -0.17
HCG18-235ENST00000426882 PCSK5Q92824 1860 aa13.98□□□□□ -0.17
HCG18-235ENST00000426882 PTPRBP23467 1997 aa13.98□□□□□ -0.17
HCG18-235ENST00000426882 EGFEM1PQ0D2K5 195 aa13.97□□□□□ -0.17
HCG18-235ENST00000426882 Q8N814 137 aa13.97□□□□□ -0.17
HCG18-235ENST00000426882 EPG5Q9HCE0 2579 aa13.97□□□□□ -0.17
HCG18-235ENST00000426882 Q6JHZ5 121 aa13.97□□□□□ -0.17
HCG18-235ENST00000426882 Q6Q795 121 aa13.97□□□□□ -0.17
HCG18-235ENST00000426882 TRBV10-3A0A0K0K1G6 114 aa13.97□□□□□ -0.17
HCG18-235ENST00000426882 COX7CP15954 63 aa13.96□□□□□ -0.17
HCG18-235ENST00000426882 A0A1B0GUV1 79 aa13.95□□□□□ -0.18
HCG18-235ENST00000426882 PPDPFQ9H3Y8 114 aa13.95□□□□□ -0.18
HCG18-235ENST00000426882 LOC107984640A0A0U1RRK4 108 aa13.95□□□□□ -0.18
HCG18-235ENST00000426882 Q8N2B8 174 aa13.95□□□□□ -0.18
HCG18-235ENST00000426882 Q6ZTC4 211 aa13.93□□□□□ -0.18
HCG18-235ENST00000426882 IGKV4-1P06312 121 aa13.92□□□□□ -0.18
HCG18-235ENST00000426882 WFDC10BQ8IUB3 73 aa13.92□□□□□ -0.18
HCG18-235ENST00000426882 NDUFC2O95298 119 aa13.91□□□□□ -0.18
HCG18-235ENST00000426882 CHD7Q9P2D1 2997 aa13.91□□□□□ -0.18
HCG18-235ENST00000426882 SNURFQ9Y675 71 aa13.9□□□□□ -0.18
HCG18-235ENST00000426882 C6orf223Q8N319 242 aa13.9□□□□□ -0.18
HCG18-235ENST00000426882 IGLV5-39A0A0G2JS06 123 aa13.89□□□□□ -0.19
HCG18-235ENST00000426882 FAM19A3Q7Z5A8 133 aa13.89□□□□□ -0.19
HCG18-235ENST00000426882 LINC00337Q8N6G1 96 aa13.88□□□□□ -0.19
HCG18-235ENST00000426882 A0A087WVE0 104 aa13.87□□□□□ -0.19
HCG18-235ENST00000426882 M0R2N4 97 aa13.87□□□□□ -0.19
HCG18-235ENST00000426882 Q9UF83 564 aa13.86□□□□□ -0.19
HCG18-235ENST00000426882 LRCOL1A6NCL2 159 aa13.86□□□□□ -0.19
HCG18-235ENST00000426882 WFDC13Q8IUB5 93 aa13.86□□□□□ -0.19
HCG18-235ENST00000426882 COL27A1Q8IZC6 1860 aaPredicted RBP13.86□□□□□ -0.19
HCG18-235ENST00000426882 MPLKIPQ8TAP9 179 aa13.85□□□□□ -0.19
HCG18-235ENST00000426882 BRK1Q8WUW1 75 aa13.84□□□□□ -0.19
HCG18-235ENST00000426882 LYPD5Q6UWN5 251 aa13.84□□□□□ -0.19
HCG18-235ENST00000426882 IGHV3OR16-9A0A0B4J2B5 98 aa13.83□□□□□ -0.2
HCG18-235ENST00000426882 M0QXV9 152 aa13.83□□□□□ -0.2
HCG18-235ENST00000426882 MUC4Q99102 2169 aa13.82□□□□□ -0.2
HCG18-235ENST00000426882 NDUFC1O43677 76 aa13.82□□□□□ -0.2
HCG18-235ENST00000426882 NDUFC2-KCTD14E9PQ53 114 aa13.81□□□□□ -0.2
HCG18-235ENST00000426882 KLK9Q2XQG4 91 aa13.81□□□□□ -0.2
HCG18-235ENST00000426882 LINC01561Q8N1V8 128 aa13.81□□□□□ -0.2
HCG18-235ENST00000426882 CDIP1Q9H305 208 aa13.8□□□□□ -0.2
HCG18-235ENST00000426882 C5orf42Q9H799 3197 aa13.8□□□□□ -0.2
HCG18-235ENST00000426882 FHL3Q13643 280 aa13.79□□□□□ -0.2
HCG18-235ENST00000426882 A8MTW9 85 aa13.79□□□□□ -0.2
HCG18-235ENST00000426882 PLAC8L1A1L4L8 177 aa13.79□□□□□ -0.2
HCG18-235ENST00000426882 SMCPP49901 116 aaPredicted RBP13.78□□□□□ -0.2
HCG18-235ENST00000426882 C1orf137Q5JT78 98 aa13.78□□□□□ -0.2
HCG18-235ENST00000426882 IGLV5-45A0A087WSX0 123 aa13.77□□□□□ -0.21
HCG18-235ENST00000426882 SPINK6Q6UWN8 80 aa13.76□□□□□ -0.21
HCG18-235ENST00000426882 LINC00575Q6W349 94 aa13.76□□□□□ -0.21
HCG18-235ENST00000426882 CELA1Q9UNI1 258 aa13.76□□□□□ -0.21
HCG18-235ENST00000426882 C2orf48Q96LS8 159 aa13.75□□□□□ -0.21
HCG18-235ENST00000426882 LINC00846Q9NV44 126 aa13.75□□□□□ -0.21
HCG18-235ENST00000426882 HRCT1Q6UXD1 115 aa13.75□□□□□ -0.21
HCG18-235ENST00000426882 PRO0461Q9UI25 63 aa13.75□□□□□ -0.21
HCG18-235ENST00000426882 C7orf33Q8WU49 177 aa13.74□□□□□ -0.21
HCG18-235ENST00000426882 ATP5EP56381 51 aaPredicted RBP13.74□□□□□ -0.21
HCG18-235ENST00000426882 TRAV7A0A075B6U4 112 aa13.74□□□□□ -0.21
HCG18-235ENST00000426882 PRR4Q16378 134 aa13.74□□□□□ -0.21
HCG18-235ENST00000426882 Q6ZRU5 148 aa13.74□□□□□ -0.21
HCG18-235ENST00000426882 ZNF706Q9Y5V0 76 aaPredicted RBP13.73□□□□□ -0.21
HCG18-235ENST00000426882 IGLV9-49A0A0B4J1Y8 123 aa13.73□□□□□ -0.21
HCG18-235ENST00000426882 LINC00474Q9P2X8 69 aa13.73□□□□□ -0.21
HCG18-235ENST00000426882 FAM30AQ9NZY2 134 aa13.72□□□□□ -0.21
HCG18-235ENST00000426882 REG3GQ6UW15 175 aa13.72□□□□□ -0.21
HCG18-235ENST00000426882 SOSTDC1Q6X4U4 206 aa13.71□□□□□ -0.21
HCG18-235ENST00000426882 Q8N3U1 123 aa13.7□□□□□ -0.22
HCG18-235ENST00000426882 HTTP42858 3142 aa13.69□□□□□ -0.22
HCG18-235ENST00000426882 F8WDY8 70 aa13.68□□□□□ -0.22
HCG18-235ENST00000426882 CHD9Q3L8U1 2897 aa13.67□□□□□ -0.22
HCG18-235ENST00000426882 FSHBP01225 129 aa13.67□□□□□ -0.22
HCG18-235ENST00000426882 C10orf25Q5T742 122 aa13.66□□□□□ -0.22
HCG18-235ENST00000426882 LY6G6CO95867 125 aa13.66□□□□□ -0.22
HCG18-235ENST00000426882 Q6ZVQ6 151 aa13.66□□□□□ -0.22
HCG18-235ENST00000426882 X6R8D5 127 aa13.65□□□□□ -0.22
HCG18-235ENST00000426882 RANBP2P49792 3224 aaKnown RBP13.65□□□□□ -0.22
HCG18-235ENST00000426882 MRPL55Q7Z7F7 128 aaKnown RBP13.65□□□□□ -0.22
HCG18-235ENST00000426882 CASC2Q6XLA1 102 aa13.64□□□□□ -0.23
HCG18-235ENST00000426882 TRBV7-7A0A0K0K1E9 115 aa13.64□□□□□ -0.23
HCG18-235ENST00000426882 SPTSSBQ8NFR3 76 aa13.63□□□□□ -0.23
HCG18-235ENST00000426882 FAM218AQ96MZ4 157 aa13.63□□□□□ -0.23
HCG18-235ENST00000426882 NUPR2A6NF83 97 aa13.62□□□□□ -0.23
HCG18-235ENST00000426882 PRYO14603 147 aa13.62□□□□□ -0.23
HCG18-235ENST00000426882 SEC61GP60059 68 aa13.6□□□□□ -0.23
HCG18-235ENST00000426882 LINC01547P58512 204 aaPredicted RBP13.59□□□□□ -0.23
HCG18-235ENST00000426882 FLNBO75369 2602 aaKnown RBP13.59□□□□□ -0.23
HCG18-235ENST00000426882 SBSPONQ8IVN8 264 aa13.59□□□□□ -0.23
HCG18-235ENST00000426882 ESRGQ1W209 222 aa13.58□□□□□ -0.24
HCG18-235ENST00000426882 A0A087WSZ3 146 aa13.57□□□□□ -0.24
HCG18-235ENST00000426882 C6orf48Q9UBA6 75 aa13.57□□□□□ -0.24
HCG18-235ENST00000426882 Q9BRP9 147 aa13.57□□□□□ -0.24
HCG18-235ENST00000426882 A0A0U1RQV1 116 aa13.56□□□□□ -0.24
HCG18-235ENST00000426882 LINC00208Q96KT6 92 aa13.56□□□□□ -0.24
HCG18-235ENST00000426882 LINC01556Q5JQF7 62 aa13.56□□□□□ -0.24
HCG18-235ENST00000426882 LITAFQ99732 161 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms