RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 K7ERJ3 54 aa6.46□□□□□ -1.38
HMGB4-201ENST00000425537 CKS1BP61024 79 aa6.46□□□□□ -1.38
HMGB4-201ENST00000425537 CLPSL2Q6UWE3 100 aa6.46□□□□□ -1.38
HMGB4-201ENST00000425537 PGPEP1Q9NXJ5 209 aa6.46□□□□□ -1.38
HMGB4-201ENST00000425537 KLK12Q9UKR0 248 aa6.46□□□□□ -1.38
HMGB4-201ENST00000425537 K7EP34 96 aa6.45□□□□□ -1.38
HMGB4-201ENST00000425537 CFC1BP0CG36 223 aa6.45□□□□□ -1.38
HMGB4-201ENST00000425537 CFC1P0CG37 223 aa6.45□□□□□ -1.38
HMGB4-201ENST00000425537 CCL18P55774 89 aa6.45□□□□□ -1.38
HMGB4-201ENST00000425537 LINC01556Q5JQF7 62 aa6.45□□□□□ -1.38
HMGB4-201ENST00000425537 MUC7Q8TAX7 377 aa6.45□□□□□ -1.38
HMGB4-201ENST00000425537 ERG28Q9UKR5 140 aa6.45□□□□□ -1.38
HMGB4-201ENST00000425537 KLK5Q9Y337 293 aaPredicted RBP6.45□□□□□ -1.38
HMGB4-201ENST00000425537 SPCS1Q9Y6A9 102 aa6.45□□□□□ -1.38
HMGB4-201ENST00000425537 PRKDCP78527 4128 aaKnown RBP6.44□□□□□ -1.38
HMGB4-201ENST00000425537 GAGE12HA6NDE8 117 aa6.44□□□□□ -1.38
HMGB4-201ENST00000425537 IGHV3-33P01772 117 aa6.44□□□□□ -1.38
HMGB4-201ENST00000425537 COX17Q14061 63 aa6.44□□□□□ -1.38
HMGB4-201ENST00000425537 ESRGQ1W209 222 aa6.44□□□□□ -1.38
HMGB4-201ENST00000425537 ADAMTSL4-AS1Q5T5F5 129 aa6.44□□□□□ -1.38
HMGB4-201ENST00000425537 LINC00308Q8TCZ7 52 aa6.44□□□□□ -1.38
HMGB4-201ENST00000425537 UBE2WQ96B02 151 aa6.44□□□□□ -1.38
HMGB4-201ENST00000425537 IGLV10-54A0A075B6I4 117 aa6.43□□□□□ -1.38
HMGB4-201ENST00000425537 TRBV20-1A0A075B6N2 111 aa6.43□□□□□ -1.38
HMGB4-201ENST00000425537 LINC00158P58513 81 aa6.43□□□□□ -1.38
HMGB4-201ENST00000425537 FOXI1Q12951 378 aa6.43□□□□□ -1.38
HMGB4-201ENST00000425537 Q1RN00 199 aa6.43□□□□□ -1.38
HMGB4-201ENST00000425537 WFDC10BQ8IUB3 73 aa6.43□□□□□ -1.38
HMGB4-201ENST00000425537 F8WDY8 70 aa6.42□□□□□ -1.38
HMGB4-201ENST00000425537 TSPAN13O95857 204 aa6.42□□□□□ -1.38
HMGB4-201ENST00000425537 COX6CP09669 75 aa6.42□□□□□ -1.38
HMGB4-201ENST00000425537 PSMB2P49721 201 aa6.42□□□□□ -1.38
HMGB4-201ENST00000425537 ENHOQ6UWT2 76 aa6.42□□□□□ -1.38
HMGB4-201ENST00000425537 RMI2Q96E14 147 aa6.42□□□□□ -1.38
HMGB4-201ENST00000425537 C1orf43Q9BWL3 253 aa6.42□□□□□ -1.38
HMGB4-201ENST00000425537 LOC107984156A0A0G2JMH3 177 aa6.41□□□□□ -1.38
HMGB4-201ENST00000425537 DNAH10OSP0CZ25 163 aa6.41□□□□□ -1.38
HMGB4-201ENST00000425537 SCGB1C2P0DMR2 95 aa6.41□□□□□ -1.38
HMGB4-201ENST00000425537 ARL17AQ8IVW1 177 aa6.41□□□□□ -1.38
HMGB4-201ENST00000425537 NAA38Q9BRA0 125 aaKnown RBP6.41□□□□□ -1.38
HMGB4-201ENST00000425537 TRAV13-2A0A0B4J235 113 aa6.4□□□□□ -1.38
HMGB4-201ENST00000425537 NPC2P61916 151 aa6.4□□□□□ -1.38
HMGB4-201ENST00000425537 SPAG11BQ08648 103 aa6.4□□□□□ -1.38
HMGB4-201ENST00000425537 Q8N3U1 123 aa6.4□□□□□ -1.38
HMGB4-201ENST00000425537 MIR7-3HGQ8N6C7 128 aa6.4□□□□□ -1.38
HMGB4-201ENST00000425537 TRBV30A0A0K0K1B3 111 aa6.39□□□□□ -1.39
HMGB4-201ENST00000425537 A0A0U1RRA0 63 aa6.39□□□□□ -1.39
HMGB4-201ENST00000425537 KIAA0087Q14695 138 aa6.39□□□□□ -1.39
HMGB4-201ENST00000425537 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
HMGB4-201ENST00000425537 DAND5Q8N907 189 aa6.39□□□□□ -1.39
HMGB4-201ENST00000425537 UPK3BQ9BT76 320 aa6.39□□□□□ -1.39
HMGB4-201ENST00000425537 F8W1H4 67 aa6.38□□□□□ -1.39
HMGB4-201ENST00000425537 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
HMGB4-201ENST00000425537 PFN2P35080 140 aa6.38□□□□□ -1.39
HMGB4-201ENST00000425537 RPL13AP40429 203 aaKnown RBP6.38□□□□□ -1.39
HMGB4-201ENST00000425537 SND1-IT1Q9HBX3 110 aa6.38□□□□□ -1.39
HMGB4-201ENST00000425537 TENM3Q9P273 2699 aa6.38□□□□□ -1.39
HMGB4-201ENST00000425537 TGP01266 2768 aa6.38□□□□□ -1.39
HMGB4-201ENST00000425537 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
HMGB4-201ENST00000425537 NUPR2A6NF83 97 aa6.37□□□□□ -1.39
HMGB4-201ENST00000425537 H7C2G1 150 aa6.37□□□□□ -1.39
HMGB4-201ENST00000425537 C2orf48Q96LS8 159 aa6.37□□□□□ -1.39
HMGB4-201ENST00000425537 LINC00588Q9Y4M8 146 aa6.37□□□□□ -1.39
HMGB4-201ENST00000425537 DNAH9Q9NYC9 4486 aa6.37□□□□□ -1.39
HMGB4-201ENST00000425537 IGKV2D-24A0A075B6R9 120 aa6.36□□□□□ -1.39
HMGB4-201ENST00000425537 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
HMGB4-201ENST00000425537 C2orf82Q6UX34 121 aa6.36□□□□□ -1.39
HMGB4-201ENST00000425537 COL7A1Q02388 2944 aa6.36□□□□□ -1.39
HMGB4-201ENST00000425537 NDUFC2O95298 119 aa6.35□□□□□ -1.39
HMGB4-201ENST00000425537 SOSTDC1Q6X4U4 206 aa6.35□□□□□ -1.39
HMGB4-201ENST00000425537 UBE2DNLQ8IWF7 75 aa6.35□□□□□ -1.39
HMGB4-201ENST00000425537 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
HMGB4-201ENST00000425537 HUWE1Q7Z6Z7 4374 aaKnown RBP6.34□□□□□ -1.39
HMGB4-201ENST00000425537 H3BMG7 143 aa6.34□□□□□ -1.39
HMGB4-201ENST00000425537 CAMK2N2Q96S95 79 aa6.34□□□□□ -1.39
HMGB4-201ENST00000425537 TRIAP1O43715 76 aa6.33□□□□□ -1.4
HMGB4-201ENST00000425537 EIF4EBP3O60516 100 aaPredicted RBP6.33□□□□□ -1.4
HMGB4-201ENST00000425537 KRTAP26-1Q6PEX3 210 aa6.33□□□□□ -1.4
HMGB4-201ENST00000425537 UNQ6190/PRO20217Q6UXQ8 127 aa6.33□□□□□ -1.4
HMGB4-201ENST00000425537 K7ERU9 68 aa6.32□□□□□ -1.4
HMGB4-201ENST00000425537 TCL1BO95988 128 aa6.32□□□□□ -1.4
HMGB4-201ENST00000425537 Q9HAA7 133 aa6.32□□□□□ -1.4
HMGB4-201ENST00000425537 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
HMGB4-201ENST00000425537 CBY1Q9Y3M2 126 aa6.32□□□□□ -1.4
HMGB4-201ENST00000425537 H0YGX0 51 aa6.31□□□□□ -1.4
HMGB4-201ENST00000425537 J3QR89 54 aa6.31□□□□□ -1.4
HMGB4-201ENST00000425537 M0QXV9 152 aa6.31□□□□□ -1.4
HMGB4-201ENST00000425537 RPL28P46779 137 aaKnown RBP6.31□□□□□ -1.4
HMGB4-201ENST00000425537 RNF151Q2KHN1 245 aa6.31□□□□□ -1.4
HMGB4-201ENST00000425537 TTC32Q5I0X7 151 aa6.31□□□□□ -1.4
HMGB4-201ENST00000425537 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
HMGB4-201ENST00000425537 SNCGO76070 127 aa6.3□□□□□ -1.4
HMGB4-201ENST00000425537 SYCNQ0VAF6 134 aa6.3□□□□□ -1.4
HMGB4-201ENST00000425537 C4orf48Q5BLP8 95 aa6.3□□□□□ -1.4
HMGB4-201ENST00000425537 C6orf223Q8N319 242 aa6.3□□□□□ -1.4
HMGB4-201ENST00000425537 C15orf56Q8N910 161 aa6.3□□□□□ -1.4
HMGB4-201ENST00000425537 OR13C6PQ8NH95 151 aa6.3□□□□□ -1.4
HMGB4-201ENST00000425537 TMEM126AQ9H061 195 aa6.3□□□□□ -1.4
HMGB4-201ENST00000425537 LINC01620Q4KN68 170 aa6.29□□□□□ -1.4
HMGB4-201ENST00000425537 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms