RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ATP5L2Q7Z4Y8 100 aa7.28□□□□□ -1.24
HLA-DQB3-203ENST00000425319 CDIP1Q9H305 208 aa7.28□□□□□ -1.24
HLA-DQB3-203ENST00000425319 C2orf66Q6UXQ4 117 aa7.27□□□□□ -1.25
HLA-DQB3-203ENST00000425319 KRTAP7-1Q8IUC3 87 aa7.27□□□□□ -1.25
HLA-DQB3-203ENST00000425319 FAM104AQ969W3 186 aa7.27□□□□□ -1.25
HLA-DQB3-203ENST00000425319 XAGE1AQ9HD64 81 aa7.27□□□□□ -1.25
HLA-DQB3-203ENST00000425319 IGKV2D-26A0A0A0MRZ7 120 aa7.26□□□□□ -1.25
HLA-DQB3-203ENST00000425319 PRSS47A8MTI9 375 aa7.26□□□□□ -1.25
HLA-DQB3-203ENST00000425319 RAB14P61106 215 aa7.26□□□□□ -1.25
HLA-DQB3-203ENST00000425319 CTAG1AP78358 180 aa7.26□□□□□ -1.25
HLA-DQB3-203ENST00000425319 NKAPP1Q8N9T2 125 aa7.26□□□□□ -1.25
HLA-DQB3-203ENST00000425319 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
HLA-DQB3-203ENST00000425319 Q8N8P6 123 aa7.25□□□□□ -1.25
HLA-DQB3-203ENST00000425319 NDUFA5Q16718 116 aa7.24□□□□□ -1.25
HLA-DQB3-203ENST00000425319 CLLU1Q5K131 121 aa7.24□□□□□ -1.25
HLA-DQB3-203ENST00000425319 A0A1B0GXF2 115 aa7.23□□□□□ -1.25
HLA-DQB3-203ENST00000425319 LINC00304Q8N9R0 145 aa7.23□□□□□ -1.25
HLA-DQB3-203ENST00000425319 LINC00167Q96N53 147 aa7.23□□□□□ -1.25
HLA-DQB3-203ENST00000425319 AMELXQ99217 191 aa7.23□□□□□ -1.25
HLA-DQB3-203ENST00000425319 NXT2Q9NPJ8 142 aaKnown RBP7.23□□□□□ -1.25
HLA-DQB3-203ENST00000425319 LINC01549A6NIU2 74 aa7.22□□□□□ -1.25
HLA-DQB3-203ENST00000425319 RPL37AP8A6NKH3 93 aa7.22□□□□□ -1.25
HLA-DQB3-203ENST00000425319 FAM229BQ4G0N7 80 aa7.22□□□□□ -1.25
HLA-DQB3-203ENST00000425319 LINC00173Q6ZV60 143 aa7.22□□□□□ -1.25
HLA-DQB3-203ENST00000425319 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
HLA-DQB3-203ENST00000425319 IGLV7-46A0A075B6I9 117 aa7.21□□□□□ -1.26
HLA-DQB3-203ENST00000425319 C4orf48Q5BLP8 95 aa7.21□□□□□ -1.26
HLA-DQB3-203ENST00000425319 A0A087X002 238 aa7.2□□□□□ -1.26
HLA-DQB3-203ENST00000425319 GAGE10A6NGK3 116 aa7.2□□□□□ -1.26
HLA-DQB3-203ENST00000425319 MT-ND4LP03901 98 aa7.2□□□□□ -1.26
HLA-DQB3-203ENST00000425319 PDZD11Q5EBL8 140 aa7.2□□□□□ -1.26
HLA-DQB3-203ENST00000425319 CDKN2A-AS1Q9UH64 79 aa7.2□□□□□ -1.26
HLA-DQB3-203ENST00000425319 IGIPA6NJ69 53 aa7.19□□□□□ -1.26
HLA-DQB3-203ENST00000425319 RAB5BP61020 215 aa7.19□□□□□ -1.26
HLA-DQB3-203ENST00000425319 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
HLA-DQB3-203ENST00000425319 ANAPC16Q96DE5 110 aa7.19□□□□□ -1.26
HLA-DQB3-203ENST00000425319 TIMM17AQ99595 171 aa7.19□□□□□ -1.26
HLA-DQB3-203ENST00000425319 ATP5LO75964 103 aa7.18□□□□□ -1.26
HLA-DQB3-203ENST00000425319 RPL24P83731 157 aaKnown RBP7.18□□□□□ -1.26
HLA-DQB3-203ENST00000425319 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
HLA-DQB3-203ENST00000425319 ZC2HC1BQ5TFG8 222 aa7.18□□□□□ -1.26
HLA-DQB3-203ENST00000425319 SPAG11AQ6PDA7 123 aa7.18□□□□□ -1.26
HLA-DQB3-203ENST00000425319 LINC00337Q8N6G1 96 aa7.18□□□□□ -1.26
HLA-DQB3-203ENST00000425319 SCGB3A1Q96QR1 104 aa7.18□□□□□ -1.26
HLA-DQB3-203ENST00000425319 H3BRM9 83 aa7.17□□□□□ -1.26
HLA-DQB3-203ENST00000425319 PNRC1Q12796 327 aaPredicted RBP7.17□□□□□ -1.26
HLA-DQB3-203ENST00000425319 ERASQ7Z444 233 aa7.17□□□□□ -1.26
HLA-DQB3-203ENST00000425319 GNB1LQ9BYB4 327 aa7.17□□□□□ -1.26
HLA-DQB3-203ENST00000425319 MRPL18Q9H0U6 180 aaKnown RBP7.17□□□□□ -1.26
HLA-DQB3-203ENST00000425319 ANAPC11Q9NYG5 84 aa7.17□□□□□ -1.26
HLA-DQB3-203ENST00000425319 LPAP08519 4548 aa7.17□□□□□ -1.26
HLA-DQB3-203ENST00000425319 TINCRA0A1B0GVN0 87 aa7.16□□□□□ -1.26
HLA-DQB3-203ENST00000425319 FAM19A1Q7Z5A9 133 aa7.16□□□□□ -1.26
HLA-DQB3-203ENST00000425319 COMMD7Q86VX2 200 aa7.16□□□□□ -1.26
HLA-DQB3-203ENST00000425319 SLC7A5P1Q8MH63 180 aa7.16□□□□□ -1.26
HLA-DQB3-203ENST00000425319 RETNLBQ9BQ08 111 aa7.16□□□□□ -1.26
HLA-DQB3-203ENST00000425319 IGLV5-37A0A075B6J1 123 aa7.15□□□□□ -1.26
HLA-DQB3-203ENST00000425319 C9JQL5 133 aa7.15□□□□□ -1.26
HLA-DQB3-203ENST00000425319 ATP6V1G1O75348 118 aa7.15□□□□□ -1.26
HLA-DQB3-203ENST00000425319 TOMM6Q96B49 74 aa7.15□□□□□ -1.26
HLA-DQB3-203ENST00000425319 IGKV2-28A0A075B6P5 120 aa7.14□□□□□ -1.27
HLA-DQB3-203ENST00000425319 IGKV2D-28P01615 120 aa7.14□□□□□ -1.27
HLA-DQB3-203ENST00000425319 PPDPFQ9H3Y8 114 aa7.14□□□□□ -1.27
HLA-DQB3-203ENST00000425319 KRTAP9-6A0A140TA67 174 aa7.13□□□□□ -1.27
HLA-DQB3-203ENST00000425319 SMIM1B2RUZ4 78 aa7.13□□□□□ -1.27
HLA-DQB3-203ENST00000425319 SRSF3P84103 164 aaKnown RBP7.13□□□□□ -1.27
HLA-DQB3-203ENST00000425319 CBLN2Q8IUK8 224 aa7.13□□□□□ -1.27
HLA-DQB3-203ENST00000425319 PFN2P35080 140 aa7.12□□□□□ -1.27
HLA-DQB3-203ENST00000425319 LINC01547P58512 204 aaPredicted RBP7.12□□□□□ -1.27
HLA-DQB3-203ENST00000425319 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
HLA-DQB3-203ENST00000425319 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
HLA-DQB3-203ENST00000425319 UQCC3Q6UW78 93 aa7.12□□□□□ -1.27
HLA-DQB3-203ENST00000425319 ZNF706Q9Y5V0 76 aaPredicted RBP7.12□□□□□ -1.27
HLA-DQB3-203ENST00000425319 S100A1P23297 94 aa7.11□□□□□ -1.27
HLA-DQB3-203ENST00000425319 COX17Q14061 63 aa7.11□□□□□ -1.27
HLA-DQB3-203ENST00000425319 PMVKQ15126 192 aa7.11□□□□□ -1.27
HLA-DQB3-203ENST00000425319 FP248Q71RG6 208 aaPredicted RBP7.11□□□□□ -1.27
HLA-DQB3-203ENST00000425319 SPINK8P0C7L1 97 aa7.1□□□□□ -1.27
HLA-DQB3-203ENST00000425319 SFTA2Q6UW10 78 aa7.1□□□□□ -1.27
HLA-DQB3-203ENST00000425319 TMEM126AQ9H061 195 aa7.1□□□□□ -1.27
HLA-DQB3-203ENST00000425319 SMCO4Q9NRQ5 59 aa7.1□□□□□ -1.27
HLA-DQB3-203ENST00000425319 PRLHP81277 87 aa7.09□□□□□ -1.27
HLA-DQB3-203ENST00000425319 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.27
HLA-DQB3-203ENST00000425319 HIGD2AQ9BW72 106 aa7.09□□□□□ -1.27
HLA-DQB3-203ENST00000425319 CST9LQ9H4G1 147 aa7.09□□□□□ -1.27
HLA-DQB3-203ENST00000425319 NDUFA12Q9UI09 145 aa7.09□□□□□ -1.27
HLA-DQB3-203ENST00000425319 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
HLA-DQB3-203ENST00000425319 NDUFA6P56556 154 aa7.08□□□□□ -1.28
HLA-DQB3-203ENST00000425319 S100A12P80511 92 aa7.08□□□□□ -1.28
HLA-DQB3-203ENST00000425319 PLEKHB2Q96CS7 222 aa7.08□□□□□ -1.28
HLA-DQB3-203ENST00000425319 S100PP25815 95 aa7.07□□□□□ -1.28
HLA-DQB3-203ENST00000425319 FA2HQ7L5A8 372 aa7.07□□□□□ -1.28
HLA-DQB3-203ENST00000425319 ERG28Q9UKR5 140 aa7.07□□□□□ -1.28
HLA-DQB3-203ENST00000425319 MUC2Q02817 5179 aa7.06□□□□□ -1.28
HLA-DQB3-203ENST00000425319 SEC61BP60468 96 aaKnown RBP7.06□□□□□ -1.28
HLA-DQB3-203ENST00000425319 KIAA1644Q3SXP7 199 aa7.06□□□□□ -1.28
HLA-DQB3-203ENST00000425319 COX19Q49B96 90 aa7.06□□□□□ -1.28
HLA-DQB3-203ENST00000425319 TRAV9-1A0A075B6T8 112 aa7.05□□□□□ -1.28
HLA-DQB3-203ENST00000425319 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
HLA-DQB3-203ENST00000425319 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms