RNA–Protein interactions for RNA: ENST00000424320.5

SGIP1-205, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-205ENST00000424320 C2orf48Q96LS8 159 aa4.33□□□□□ -1.72
SGIP1-205ENST00000424320 PACRGQ96M98 296 aaPredicted RBP4.33□□□□□ -1.72
SGIP1-205ENST00000424320 IMMP2LQ96T52 175 aa4.33□□□□□ -1.72
SGIP1-205ENST00000424320 C2orf88Q9BSF0 95 aa4.33□□□□□ -1.72
SGIP1-205ENST00000424320 TIMM21Q9BVV7 248 aa4.33□□□□□ -1.72
SGIP1-205ENST00000424320 MAP1LC3AQ9H492 121 aa4.33□□□□□ -1.72
SGIP1-205ENST00000424320 TOMM7Q9P0U1 55 aa4.33□□□□□ -1.72
SGIP1-205ENST00000424320 PPBPP02775 128 aa4.32□□□□□ -1.72
SGIP1-205ENST00000424320 UNQ6190/PRO20217Q6UXQ8 127 aa4.32□□□□□ -1.72
SGIP1-205ENST00000424320 TEX43Q6ZNM6 134 aa4.32□□□□□ -1.72
SGIP1-205ENST00000424320 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
SGIP1-205ENST00000424320 LINC01600Q96MT4 127 aa4.32□□□□□ -1.72
SGIP1-205ENST00000424320 TRBV24-1A0A075B6N3 115 aa4.31□□□□□ -1.72
SGIP1-205ENST00000424320 TMEM141Q96I45 108 aa4.31□□□□□ -1.72
SGIP1-205ENST00000424320 SMDT1Q9H4I9 107 aa4.31□□□□□ -1.72
SGIP1-205ENST00000424320 MRPL35Q9NZE8 188 aaKnown RBP4.31□□□□□ -1.72
SGIP1-205ENST00000424320 PSORS1C2Q9UIG4 136 aa4.31□□□□□ -1.72
SGIP1-205ENST00000424320 CYSLTR1Q9Y271 337 aa4.31□□□□□ -1.72
SGIP1-205ENST00000424320 IGLV4-3A0A075B6K6 122 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 A0A1B0GXF2 115 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 FAM168BA1KXE4 195 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 M0QXV9 152 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 PRYO14603 147 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 MT-ND4LP03901 98 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 CKS1BP61024 79 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 RPL32P62910 135 aaKnown RBP4.3□□□□□ -1.72
SGIP1-205ENST00000424320 MRPS36P82909 103 aaKnown RBP4.3□□□□□ -1.72
SGIP1-205ENST00000424320 ATP5L2Q7Z4Y8 100 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 CTDSP1Q9GZU7 261 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 VCX2Q9H322 139 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 C6orf48Q9UBA6 75 aa4.3□□□□□ -1.72
SGIP1-205ENST00000424320 UBE2D1P51668 147 aa4.29□□□□□ -1.72
SGIP1-205ENST00000424320 PNRC1Q12796 327 aaPredicted RBP4.29□□□□□ -1.72
SGIP1-205ENST00000424320 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
SGIP1-205ENST00000424320 C2orf82Q6UX34 121 aa4.29□□□□□ -1.72
SGIP1-205ENST00000424320 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
SGIP1-205ENST00000424320 LINC00469Q8N7U9 141 aa4.29□□□□□ -1.72
SGIP1-205ENST00000424320 DIRC1Q969H9 104 aa4.29□□□□□ -1.72
SGIP1-205ENST00000424320 GEMIN7Q9H840 131 aaKnown RBP4.29□□□□□ -1.72
SGIP1-205ENST00000424320 IGHV3OR16-9A0A0B4J2B5 98 aa4.28□□□□□ -1.72
SGIP1-205ENST00000424320 F8WDY8 70 aa4.28□□□□□ -1.72
SGIP1-205ENST00000424320 IGLV7-43P04211 117 aa4.28□□□□□ -1.72
SGIP1-205ENST00000424320 ORMDL2Q53FV1 153 aa4.28□□□□□ -1.72
SGIP1-205ENST00000424320 C6orf226Q5I0X4 101 aa4.28□□□□□ -1.72
SGIP1-205ENST00000424320 LINC00242Q5T6M2 205 aa4.28□□□□□ -1.72
SGIP1-205ENST00000424320 Q8N8P6 123 aa4.28□□□□□ -1.72
SGIP1-205ENST00000424320 ALKBH7Q9BT30 221 aaPredicted RBP4.28□□□□□ -1.72
SGIP1-205ENST00000424320 LAMTOR2Q9Y2Q5 125 aa4.28□□□□□ -1.72
SGIP1-205ENST00000424320 CHTOPQ9Y3Y2 248 aaKnown RBP4.28□□□□□ -1.72
SGIP1-205ENST00000424320 SRSF9Q13242 221 aaKnown RBP eCLIP4.27□□□□□ -1.73
SGIP1-205ENST00000424320 KIAA1644Q3SXP7 199 aa4.27□□□□□ -1.73
SGIP1-205ENST00000424320 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
SGIP1-205ENST00000424320 SRRM2Q9UQ35 2752 aaKnown RBP4.27□□□□□ -1.73
SGIP1-205ENST00000424320 TRBV30A0A0K0K1B3 111 aa4.26□□□□□ -1.73
SGIP1-205ENST00000424320 NDUFC2-KCTD14E9PQ53 114 aa4.26□□□□□ -1.73
SGIP1-205ENST00000424320 S100PP25815 95 aa4.26□□□□□ -1.73
SGIP1-205ENST00000424320 PAPPA-AS1Q5QFB9 102 aa4.26□□□□□ -1.73
SGIP1-205ENST00000424320 NXT2Q9NPJ8 142 aaKnown RBP4.26□□□□□ -1.73
SGIP1-205ENST00000424320 H0Y9J4 135 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 TLX1NBP0CAT3 122 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 G0S2P27469 103 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 HERVK_113P63121 156 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 SEC11AP67812 179 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 FAM104AQ969W3 186 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 SCGB3A1Q96QR1 104 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 XAGE1AQ9HD64 81 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 SMCO4Q9NRQ5 59 aa4.25□□□□□ -1.73
SGIP1-205ENST00000424320 LRP1Q07954 4544 aaKnown RBP4.25□□□□□ -1.73
SGIP1-205ENST00000424320 NDUFA6P56556 154 aa4.24□□□□□ -1.73
SGIP1-205ENST00000424320 KIAA0087Q14695 138 aa4.24□□□□□ -1.73
SGIP1-205ENST00000424320 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
SGIP1-205ENST00000424320 FA2HQ7L5A8 372 aa4.24□□□□□ -1.73
SGIP1-205ENST00000424320 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
SGIP1-205ENST00000424320 HMCN2Q8NDA2 5059 aa4.24□□□□□ -1.73
SGIP1-205ENST00000424320 GAGE10A6NGK3 116 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 RAB5BP61020 215 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 PRR4Q16378 134 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 LBHQ53QV2 105 aaPredicted RBP4.23□□□□□ -1.73
SGIP1-205ENST00000424320 LINC00173Q6ZV60 143 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 Q8IZM0 81 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 LINC01561Q8N1V8 128 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 AMELXQ99217 191 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 CDKN2A-AS1Q9UH64 79 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 C22orf24Q9Y442 160 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
SGIP1-205ENST00000424320 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 IGIPA6NJ69 53 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 F8VRH5 84 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 K7EMI3 77 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 SPINK8P0C7L1 97 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 CXCL5P42830 114 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 CTAG1AP78358 180 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 FABP9Q0Z7S8 132 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 NKAPP1Q8N9T2 125 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 COX7B2Q8TF08 81 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 TOMM6Q96B49 74 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 TIMM17AQ99595 171 aa4.22□□□□□ -1.73
SGIP1-205ENST00000424320 IGLV1-50A0A075B6I6 118 aa4.21□□□□□ -1.74
SGIP1-205ENST00000424320 RPL37AP8A6NKH3 93 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms