RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 LYZL1Q6UWQ5 148 aa3.46□□□□□ -1.86
SDCBP-203ENST00000424270 COX8CQ7Z4L0 72 aa3.46□□□□□ -1.86
SDCBP-203ENST00000424270 Q8NBF4 154 aa3.46□□□□□ -1.86
SDCBP-203ENST00000424270 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
SDCBP-203ENST00000424270 XAGE1AQ9HD64 81 aa3.46□□□□□ -1.86
SDCBP-203ENST00000424270 NEBP20929 6669 aa3.45□□□□□ -1.86
SDCBP-203ENST00000424270 TRBV30A0A0K0K1B3 111 aa3.45□□□□□ -1.86
SDCBP-203ENST00000424270 SPINK1P00995 79 aa3.45□□□□□ -1.86
SDCBP-203ENST00000424270 PRLHP81277 87 aa3.45□□□□□ -1.86
SDCBP-203ENST00000424270 TWIST1Q15672 202 aa3.45□□□□□ -1.86
SDCBP-203ENST00000424270 SMIM15Q7Z3B0 74 aa3.45□□□□□ -1.86
SDCBP-203ENST00000424270 TMEM242Q9NWH2 141 aa3.45□□□□□ -1.86
SDCBP-203ENST00000424270 C7orf77A4D0Y5 90 aa3.44□□□□□ -1.86
SDCBP-203ENST00000424270 FAM74A7A6NL05 159 aa3.44□□□□□ -1.86
SDCBP-203ENST00000424270 ZNF727A8MUV8 499 aa3.44□□□□□ -1.86
SDCBP-203ENST00000424270 UMAD1C9J7I0 102 aa3.44□□□□□ -1.86
SDCBP-203ENST00000424270 FCER1GP30273 86 aa3.44□□□□□ -1.86
SDCBP-203ENST00000424270 RPL7L1Q6DKI1 246 aaKnown RBP3.44□□□□□ -1.86
SDCBP-203ENST00000424270 FAM19A1Q7Z5A9 133 aa3.44□□□□□ -1.86
SDCBP-203ENST00000424270 BAGE2Q86Y30 109 aa3.44□□□□□ -1.86
SDCBP-203ENST00000424270 GATD1Q8NB37 220 aa3.44□□□□□ -1.86
SDCBP-203ENST00000424270 TMEM18Q96B42 140 aa3.44□□□□□ -1.86
SDCBP-203ENST00000424270 TMEM218A2RU14 115 aa3.43□□□□□ -1.86
SDCBP-203ENST00000424270 C9orf92A6NGG3 77 aa3.43□□□□□ -1.86
SDCBP-203ENST00000424270 SLC25A20O43772 301 aa3.43□□□□□ -1.86
SDCBP-203ENST00000424270 HSBP1O75506 76 aa3.43□□□□□ -1.86
SDCBP-203ENST00000424270 RPS20P60866 119 aaKnown RBP3.43□□□□□ -1.86
SDCBP-203ENST00000424270 S100A12P80511 92 aa3.43□□□□□ -1.86
SDCBP-203ENST00000424270 PEA15Q15121 130 aa3.43□□□□□ -1.86
SDCBP-203ENST00000424270 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
SDCBP-203ENST00000424270 C2orf82Q6UX34 121 aa3.43□□□□□ -1.86
SDCBP-203ENST00000424270 MRPL52Q86TS9 123 aaKnown RBP3.43□□□□□ -1.86
SDCBP-203ENST00000424270 NKAPP1Q8N9T2 125 aa3.43□□□□□ -1.86
SDCBP-203ENST00000424270 IGKV2-28A0A075B6P5 120 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 TGIF2-C20orf24A0A0A6YYL0 155 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 F2Z2F3 143 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 IFNA1P01562 189 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 IGKV2D-28P01615 120 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 PRSS2P07478 247 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 ATP6V0CP27449 155 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 FOXA3P55318 350 aaPredicted RBP3.42□□□□□ -1.86
SDCBP-203ENST00000424270 CKS1BP61024 79 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 RPL32P62910 135 aaKnown RBP3.42□□□□□ -1.86
SDCBP-203ENST00000424270 C10orf91Q5T1B1 145 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 CBLN2Q8IUK8 224 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 LINC00167Q96N53 147 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 HIGD2AQ9BW72 106 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 MAP1LC3CQ9BXW4 147 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 ST20Q9HBF5 79 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 TP73-AS1Q9UF72 201 aa3.42□□□□□ -1.86
SDCBP-203ENST00000424270 SERF2P84101 59 aa3.41□□□□□ -1.86
SDCBP-203ENST00000424270 AKR1C8PQ5T2L2 129 aa3.41□□□□□ -1.86
SDCBP-203ENST00000424270 Q6ZUT4 128 aa3.41□□□□□ -1.86
SDCBP-203ENST00000424270 SVBPQ8N300 66 aa3.41□□□□□ -1.86
SDCBP-203ENST00000424270 TCEAL7Q9BRU2 100 aa3.41□□□□□ -1.86
SDCBP-203ENST00000424270 SEC11CQ9BY50 192 aa3.41□□□□□ -1.86
SDCBP-203ENST00000424270 TOMM7Q9P0U1 55 aa3.41□□□□□ -1.86
SDCBP-203ENST00000424270 CTXND1A0A1B0GTU2 59 aa3.4□□□□□ -1.87
SDCBP-203ENST00000424270 IFITM10A6NMD0 228 aa3.4□□□□□ -1.87
SDCBP-203ENST00000424270 F8W036 122 aa3.4□□□□□ -1.87
SDCBP-203ENST00000424270 SNAPINO95295 136 aa3.4□□□□□ -1.87
SDCBP-203ENST00000424270 APOC3P02656 99 aa3.4□□□□□ -1.87
SDCBP-203ENST00000424270 IGLC6P0CF74 106 aa3.4□□□□□ -1.87
SDCBP-203ENST00000424270 RAB4AP20338 218 aa3.4□□□□□ -1.87
SDCBP-203ENST00000424270 Q75L30 129 aa3.4□□□□□ -1.87
SDCBP-203ENST00000424270 PSMG3Q9BT73 122 aaPredicted RBP3.4□□□□□ -1.87
SDCBP-203ENST00000424270 RNASE7Q9H1E1 156 aaKnown RBP3.4□□□□□ -1.87
SDCBP-203ENST00000424270 ZNF706Q9Y5V0 76 aaPredicted RBP3.4□□□□□ -1.87
SDCBP-203ENST00000424270 LOC105371267A0A1B0GV96 52 aa3.39□□□□□ -1.87
SDCBP-203ENST00000424270 KRTAP13-1Q8IUC0 172 aa3.39□□□□□ -1.87
SDCBP-203ENST00000424270 BOD1L2Q8IYS8 172 aa3.39□□□□□ -1.87
SDCBP-203ENST00000424270 LINC00518Q8N0U6 118 aa3.39□□□□□ -1.87
SDCBP-203ENST00000424270 Q8N377 158 aa3.39□□□□□ -1.87
SDCBP-203ENST00000424270 FAM213BQ8TBF2 198 aa3.39□□□□□ -1.87
SDCBP-203ENST00000424270 MBD3L1Q8WWY6 194 aa3.39□□□□□ -1.87
SDCBP-203ENST00000424270 PLEKHB2Q96CS7 222 aa3.39□□□□□ -1.87
SDCBP-203ENST00000424270 EIF5A2Q9GZV4 153 aaKnown RBP3.39□□□□□ -1.87
SDCBP-203ENST00000424270 PAM16Q9Y3D7 125 aa3.39□□□□□ -1.87
SDCBP-203ENST00000424270 IGHV3OR16-9A0A0B4J2B5 98 aa3.38□□□□□ -1.87
SDCBP-203ENST00000424270 GATCO43716 136 aaKnown RBP3.38□□□□□ -1.87
SDCBP-203ENST00000424270 SCO1O75880 301 aa3.38□□□□□ -1.87
SDCBP-203ENST00000424270 COX19Q49B96 90 aa3.38□□□□□ -1.87
SDCBP-203ENST00000424270 FAM74A3Q4VXF1 159 aa3.38□□□□□ -1.87
SDCBP-203ENST00000424270 SFT2D1Q8WV19 159 aa3.38□□□□□ -1.87
SDCBP-203ENST00000424270 GNB1LQ9BYB4 327 aa3.38□□□□□ -1.87
SDCBP-203ENST00000424270 V9GYY9 64 aa3.38□□□□□ -1.87
SDCBP-203ENST00000424270 IGLV9-49A0A0B4J1Y8 123 aa3.37□□□□□ -1.87
SDCBP-203ENST00000424270 MAP1LC3B2A6NCE7 125 aa3.37□□□□□ -1.87
SDCBP-203ENST00000424270 C9JQL5 133 aa3.37□□□□□ -1.87
SDCBP-203ENST00000424270 HBBP68871 147 aa3.37□□□□□ -1.87
SDCBP-203ENST00000424270 RHEBQ15382 184 aa3.37□□□□□ -1.87
SDCBP-203ENST00000424270 KRTAP9-8Q9BYQ0 159 aa3.37□□□□□ -1.87
SDCBP-203ENST00000424270 MAP1LC3BQ9GZQ8 125 aa3.37□□□□□ -1.87
SDCBP-203ENST00000424270 SMCO4Q9NRQ5 59 aa3.37□□□□□ -1.87
SDCBP-203ENST00000424270 TMEM238C9JI98 176 aa3.36□□□□□ -1.87
SDCBP-203ENST00000424270 LGALS3P17931 250 aaKnown RBP3.36□□□□□ -1.87
SDCBP-203ENST00000424270 ADCYAP1P18509 176 aa3.36□□□□□ -1.87
SDCBP-203ENST00000424270 CCL20P78556 96 aa3.36□□□□□ -1.87
SDCBP-203ENST00000424270 MOBPQ13875 183 aa3.36□□□□□ -1.87
SDCBP-203ENST00000424270 KIAA0087Q14695 138 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms