RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
MSH5-206ENST00000423982 C3orf22Q8N5N4 141 aa10.08□□□□□ -0.8
MSH5-206ENST00000423982 CSDC2Q9Y534 153 aaKnown RBP10.08□□□□□ -0.8
MSH5-206ENST00000423982 IL17DQ8TAD2 202 aa10.08□□□□□ -0.8
MSH5-206ENST00000423982 UBE2L6O14933 153 aa10.07□□□□□ -0.8
MSH5-206ENST00000423982 RPL28P46779 137 aaKnown RBP10.07□□□□□ -0.8
MSH5-206ENST00000423982 LINC00158P58513 81 aa10.07□□□□□ -0.8
MSH5-206ENST00000423982 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
MSH5-206ENST00000423982 SLPIP03973 132 aa10.07□□□□□ -0.8
MSH5-206ENST00000423982 PFN2P35080 140 aa10.07□□□□□ -0.8
MSH5-206ENST00000423982 COX7B2Q8TF08 81 aa10.07□□□□□ -0.8
MSH5-206ENST00000423982 C11orf68Q9H3H3 251 aaKnown RBP10.07□□□□□ -0.8
MSH5-206ENST00000423982 IGKV3D-7A0A0C4DH55 119 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 C5orf38Q86SI9 138 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 WFDC10AQ9H1F0 79 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 IGLV4-60A0A075B6I1 120 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 LOC107984640A0A0U1RRK4 108 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 TMEM126AQ9H061 195 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 TRAV13-2A0A0B4J235 113 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 CCL18P55774 89 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 FAM222AQ5U5X8 452 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 TMEM243Q9BU79 118 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 CYSTM1Q9H1C7 97 aa10.06□□□□□ -0.8
MSH5-206ENST00000423982 INAFM2P0DMQ5 153 aa10.05□□□□□ -0.8
MSH5-206ENST00000423982 NBEAL2Q6ZNJ1 2754 aa10.04□□□□□ -0.8
MSH5-206ENST00000423982 A0A087WVE0 104 aa10.04□□□□□ -0.8
MSH5-206ENST00000423982 TRBV10-1A0A0K0K1A3 114 aa10.04□□□□□ -0.8
MSH5-206ENST00000423982 NCR3O14931 201 aa10.04□□□□□ -0.8
MSH5-206ENST00000423982 LECT2O14960 151 aa10.04□□□□□ -0.8
MSH5-206ENST00000423982 UQCRQO14949 82 aa10.04□□□□□ -0.8
MSH5-206ENST00000423982 DNAL4O96015 105 aa10.04□□□□□ -0.8
MSH5-206ENST00000423982 LINC00846Q9NV44 126 aa10.03□□□□□ -0.8
MSH5-206ENST00000423982 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
MSH5-206ENST00000423982 NOTCH1P46531 2555 aa10.03□□□□□ -0.8
MSH5-206ENST00000423982 TRGV2A0A075B6R0 118 aa10.02□□□□□ -0.81
MSH5-206ENST00000423982 LINC00526Q96FQ7 95 aa10.02□□□□□ -0.81
MSH5-206ENST00000423982 OR13C6PQ8NH95 151 aa10.02□□□□□ -0.81
MSH5-206ENST00000423982 PAX4O43316 350 aa10.01□□□□□ -0.81
MSH5-206ENST00000423982 GIG44P09565 113 aaPredicted RBP10.01□□□□□ -0.81
MSH5-206ENST00000423982 hADV29S1A0JD25 119 aa10□□□□□ -0.81
MSH5-206ENST00000423982 PLAC8L1A1L4L8 177 aa10□□□□□ -0.81
MSH5-206ENST00000423982 COX7CP15954 63 aa10□□□□□ -0.81
MSH5-206ENST00000423982 RPL35AP18077 110 aaKnown RBP10□□□□□ -0.81
MSH5-206ENST00000423982 CXCL5P42830 114 aa10□□□□□ -0.81
MSH5-206ENST00000423982 LINC00482Q8N8I6 264 aa10□□□□□ -0.81
MSH5-206ENST00000423982 IGHV3OR16-9A0A0B4J2B5 98 aa9.99□□□□□ -0.81
MSH5-206ENST00000423982 HIST1H4AP62805 103 aaKnown RBP9.98□□□□□ -0.81
MSH5-206ENST00000423982 PRR3P79522 188 aaKnown RBP9.98□□□□□ -0.81
MSH5-206ENST00000423982 TRGV4A0A0C4DH28 118 aa9.97□□□□□ -0.81
MSH5-206ENST00000423982 MGAM2Q2M2H8 2515 aa9.97□□□□□ -0.81
MSH5-206ENST00000423982 CLPSL2Q6UWE3 100 aa9.97□□□□□ -0.81
MSH5-206ENST00000423982 A0A1B0GX51 115 aa9.96□□□□□ -0.81
MSH5-206ENST00000423982 SS18Q15532 418 aa9.96□□□□□ -0.81
MSH5-206ENST00000423982 CFAP161Q6P656 301 aa9.96□□□□□ -0.81
MSH5-206ENST00000423982 NBEAL1Q6ZS30 2694 aa9.96□□□□□ -0.82
MSH5-206ENST00000423982 TRBV6-8A0A0A6YYG3 113 aa9.95□□□□□ -0.82
MSH5-206ENST00000423982 XCL1P47992 114 aa9.95□□□□□ -0.82
MSH5-206ENST00000423982 LINC01561Q8N1V8 128 aa9.95□□□□□ -0.82
MSH5-206ENST00000423982 WFDC9Q8NEX5 89 aa9.95□□□□□ -0.82
MSH5-206ENST00000423982 OBSCN-AS1Q96MR7 158 aa9.95□□□□□ -0.82
MSH5-206ENST00000423982 IGLV1-51P01701 117 aa9.94□□□□□ -0.82
MSH5-206ENST00000423982 RPL18AQ02543 176 aaKnown RBP9.94□□□□□ -0.82
MSH5-206ENST00000423982 IBA57-AS1B1ANH7 110 aa9.94□□□□□ -0.82
MSH5-206ENST00000423982 H0YGX0 51 aa9.94□□□□□ -0.82
MSH5-206ENST00000423982 ATOX1O00244 68 aa9.94□□□□□ -0.82
MSH5-206ENST00000423982 A0A087WZ39 114 aa9.93□□□□□ -0.82
MSH5-206ENST00000423982 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
MSH5-206ENST00000423982 MDFIQ99750 246 aa9.93□□□□□ -0.82
MSH5-206ENST00000423982 TRBV6-4A0A1B0GX49 114 aa9.92□□□□□ -0.82
MSH5-206ENST00000423982 CRYGAP11844 174 aa9.92□□□□□ -0.82
MSH5-206ENST00000423982 FHL2Q14192 279 aa9.92□□□□□ -0.82
MSH5-206ENST00000423982 OXLD1Q5BKU9 147 aa9.92□□□□□ -0.82
MSH5-206ENST00000423982 KIR2DL5BQ8NHK3 375 aa9.92□□□□□ -0.82
MSH5-206ENST00000423982 OVOL2Q9BRP0 275 aa9.92□□□□□ -0.82
MSH5-206ENST00000423982 ANK2Q01484 3957 aa9.92□□□□□ -0.82
MSH5-206ENST00000423982 A0A096LPF7 62 aa9.91□□□□□ -0.82
MSH5-206ENST00000423982 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
MSH5-206ENST00000423982 Q6JHZ5 121 aa9.91□□□□□ -0.82
MSH5-206ENST00000423982 CMYA5Q8N3K9 4069 aa9.91□□□□□ -0.82
MSH5-206ENST00000423982 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
MSH5-206ENST00000423982 DEFB130BP0DP73 79 aa9.91□□□□□ -0.82
MSH5-206ENST00000423982 DEFB130AP0DP74 79 aa9.91□□□□□ -0.82
MSH5-206ENST00000423982 TRAV25A0A0B4J276 109 aa9.9□□□□□ -0.83
MSH5-206ENST00000423982 USP17L23D6RBM5 183 aa9.9□□□□□ -0.83
MSH5-206ENST00000423982 NANOS2P60321 138 aaKnown RBP9.9□□□□□ -0.83
MSH5-206ENST00000423982 FAM19A5Q7Z5A7 132 aaPredicted RBP9.9□□□□□ -0.83
MSH5-206ENST00000423982 ORMDL1Q9P0S3 153 aa9.9□□□□□ -0.83
MSH5-206ENST00000423982 C9orf66Q5T8R8 295 aa9.88□□□□□ -0.83
MSH5-206ENST00000423982 CSNK1G2-AS1Q8NCQ2 148 aa9.88□□□□□ -0.83
MSH5-206ENST00000423982 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
MSH5-206ENST00000423982 UPK3BQ9BT76 320 aa9.87□□□□□ -0.83
MSH5-206ENST00000423982 J3KT08 172 aa9.87□□□□□ -0.83
MSH5-206ENST00000423982 Q8N3U1 123 aa9.87□□□□□ -0.83
MSH5-206ENST00000423982 SERP2Q8N6R1 65 aa9.86□□□□□ -0.83
MSH5-206ENST00000423982 DSCR8Q96T75 97 aa9.86□□□□□ -0.83
MSH5-206ENST00000423982 C19orf73Q9NVV2 129 aa9.86□□□□□ -0.83
MSH5-206ENST00000423982 CCKP06307 115 aa9.86□□□□□ -0.83
MSH5-206ENST00000423982 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
MSH5-206ENST00000423982 Q8NDZ9 215 aa9.86□□□□□ -0.83
MSH5-206ENST00000423982 DNHD1Q96M86 4753 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms