RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 GAGE2EQ4V326 116 aa13.64□□□□□ -0.23
TRAF4-204ENST00000422344 C6orf226Q5I0X4 101 aa13.64□□□□□ -0.23
TRAF4-204ENST00000422344 GAGE2DQ9UEU5 116 aa13.64□□□□□ -0.23
TRAF4-204ENST00000422344 CDKN2A-AS1Q9UH64 79 aa13.64□□□□□ -0.23
TRAF4-204ENST00000422344 LINC00469Q8N7U9 141 aa13.63□□□□□ -0.23
TRAF4-204ENST00000422344 Q8IZM0 81 aa13.62□□□□□ -0.23
TRAF4-204ENST00000422344 TINCRA0A1B0GVN0 87 aa13.6□□□□□ -0.23
TRAF4-204ENST00000422344 NDUFC2-KCTD14E9PQ53 114 aa13.6□□□□□ -0.23
TRAF4-204ENST00000422344 PMVKQ15126 192 aa13.6□□□□□ -0.23
TRAF4-204ENST00000422344 CST9LQ9H4G1 147 aa13.6□□□□□ -0.23
TRAF4-204ENST00000422344 PHF5AQ7RTV0 110 aaKnown RBP13.59□□□□□ -0.23
TRAF4-204ENST00000422344 C18orf32Q8TCD1 76 aa13.59□□□□□ -0.23
TRAF4-204ENST00000422344 LINC00614P0C842 121 aa13.58□□□□□ -0.24
TRAF4-204ENST00000422344 MT1HL1P0DM35 61 aa13.58□□□□□ -0.24
TRAF4-204ENST00000422344 FAM19A5Q7Z5A7 132 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-204ENST00000422344 FAM168BA1KXE4 195 aa13.57□□□□□ -0.24
TRAF4-204ENST00000422344 SPINK6Q6UWN8 80 aa13.57□□□□□ -0.24
TRAF4-204ENST00000422344 RAB5BP61020 215 aa13.56□□□□□ -0.24
TRAF4-204ENST00000422344 SMIM1B2RUZ4 78 aa13.55□□□□□ -0.24
TRAF4-204ENST00000422344 F8VRH5 84 aa13.55□□□□□ -0.24
TRAF4-204ENST00000422344 HBDP02042 147 aa13.55□□□□□ -0.24
TRAF4-204ENST00000422344 CXCL5P42830 114 aa13.55□□□□□ -0.24
TRAF4-204ENST00000422344 NDUFA6P56556 154 aa13.55□□□□□ -0.24
TRAF4-204ENST00000422344 PDZD11Q5EBL8 140 aa13.55□□□□□ -0.24
TRAF4-204ENST00000422344 IGLV5-45A0A087WSX0 123 aa13.54□□□□□ -0.24
TRAF4-204ENST00000422344 URB1-AS1Q96HZ7 61 aa13.54□□□□□ -0.24
TRAF4-204ENST00000422344 PSORS1C2Q9UIG4 136 aa13.54□□□□□ -0.24
TRAF4-204ENST00000422344 H3BRM9 83 aa13.53□□□□□ -0.24
TRAF4-204ENST00000422344 REG3GQ6UW15 175 aa13.53□□□□□ -0.24
TRAF4-204ENST00000422344 COX7B2Q8TF08 81 aa13.53□□□□□ -0.24
TRAF4-204ENST00000422344 PMCHL1Q16048 86 aa13.52□□□□□ -0.25
TRAF4-204ENST00000422344 C1orf137Q5JT78 98 aa13.52□□□□□ -0.25
TRAF4-204ENST00000422344 A0A096LNJ9 63 aa13.51□□□□□ -0.25
TRAF4-204ENST00000422344 M0QXV9 152 aa13.51□□□□□ -0.25
TRAF4-204ENST00000422344 SPINK8P0C7L1 97 aa13.51□□□□□ -0.25
TRAF4-204ENST00000422344 C9orf129Q5T035 196 aaKnown RBP13.5□□□□□ -0.25
TRAF4-204ENST00000422344 ATP5LO75964 103 aa13.49□□□□□ -0.25
TRAF4-204ENST00000422344 UBE2BP63146 152 aa13.49□□□□□ -0.25
TRAF4-204ENST00000422344 SRSF9Q13242 221 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■□□□ 13.7
TRAF4-204ENST00000422344 YPEL4Q96NS1 127 aa13.49□□□□□ -0.25
TRAF4-204ENST00000422344 IGLC3P0DOY3 106 aa13.48□□□□□ -0.25
TRAF4-204ENST00000422344 LRP2P98164 4655 aa13.47□□□□□ -0.25
TRAF4-204ENST00000422344 CBLN2Q8IUK8 224 aa13.47□□□□□ -0.25
TRAF4-204ENST00000422344 LINC01600Q96MT4 127 aa13.47□□□□□ -0.25
TRAF4-204ENST00000422344 XAGE1AQ9HD64 81 aa13.47□□□□□ -0.25
TRAF4-204ENST00000422344 KRTAP7-1Q8IUC3 87 aa13.46□□□□□ -0.25
TRAF4-204ENST00000422344 TNXBP22105 4242 aa13.46□□□□□ -0.25
TRAF4-204ENST00000422344 RNF213Q63HN8 5207 aa13.45□□□□□ -0.26
TRAF4-204ENST00000422344 BAGE3Q86Y29 109 aa13.44□□□□□ -0.26
TRAF4-204ENST00000422344 CHCHD1Q96BP2 118 aaKnown RBP13.44□□□□□ -0.26
TRAF4-204ENST00000422344 IGLV7-43P04211 117 aa13.43□□□□□ -0.26
TRAF4-204ENST00000422344 ZNF22P17026 224 aaPredicted RBP13.42□□□□□ -0.26
TRAF4-204ENST00000422344 KRTAP11-1Q8IUC1 163 aa13.42□□□□□ -0.26
TRAF4-204ENST00000422344 SLC7A5P1Q8MH63 180 aa13.41□□□□□ -0.26
TRAF4-204ENST00000422344 LBHQ53QV2 105 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-204ENST00000422344 TMEM170BQ5T4T1 132 aa13.39□□□□□ -0.27
TRAF4-204ENST00000422344 DIRC1Q969H9 104 aa13.39□□□□□ -0.27
TRAF4-204ENST00000422344 C22orf24Q9Y442 160 aa13.39□□□□□ -0.27
TRAF4-204ENST00000422344 IGLV5-39A0A0G2JS06 123 aa13.38□□□□□ -0.27
TRAF4-204ENST00000422344 C11orf86A6NJI1 115 aa13.38□□□□□ -0.27
TRAF4-204ENST00000422344 HSBP1O75506 76 aa13.38□□□□□ -0.27
TRAF4-204ENST00000422344 CHTOPQ9Y3Y2 248 aaKnown RBP13.38□□□□□ -0.27
TRAF4-204ENST00000422344 IFI27L1Q96BM0 104 aa13.37□□□□□ -0.27
TRAF4-204ENST00000422344 TRGC2P03986 189 aa13.35□□□□□ -0.27
TRAF4-204ENST00000422344 PFN2P35080 140 aa13.34□□□□□ -0.27
TRAF4-204ENST00000422344 MRPL55Q7Z7F7 128 aaKnown RBP13.34□□□□□ -0.27
TRAF4-204ENST00000422344 TP73-AS1Q9UF72 201 aa13.34□□□□□ -0.27
TRAF4-204ENST00000422344 TRAV12-1A0A0B4J245 112 aa13.33□□□□□ -0.28
TRAF4-204ENST00000422344 ODF1Q14990 250 aa13.33□□□□□ -0.28
TRAF4-204ENST00000422344 H0Y9J4 135 aa13.32□□□□□ -0.28
TRAF4-204ENST00000422344 KRTAP10-8P60410 259 aa13.32□□□□□ -0.28
TRAF4-204ENST00000422344 SFTA2Q6UW10 78 aa13.32□□□□□ -0.28
TRAF4-204ENST00000422344 FAM19A2Q8N3H0 131 aa13.32□□□□□ -0.28
TRAF4-204ENST00000422344 NUPR1O60356 82 aa13.31□□□□□ -0.28
TRAF4-204ENST00000422344 NKAPP1Q8N9T2 125 aa13.31□□□□□ -0.28
TRAF4-204ENST00000422344 ERG28Q9UKR5 140 aa13.31□□□□□ -0.28
TRAF4-204ENST00000422344 ZNF625Q96I27 306 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-204ENST00000422344 COX17Q14061 63 aa13.28□□□□□ -0.28
TRAF4-204ENST00000422344 SERF1AO75920 110 aa13.27□□□□□ -0.29
TRAF4-204ENST00000422344 LINC00167Q96N53 147 aa13.27□□□□□ -0.29
TRAF4-204ENST00000422344 IGLV5-37A0A075B6J1 123 aa13.26□□□□□ -0.29
TRAF4-204ENST00000422344 TMEM223A0PJW6 202 aa13.26□□□□□ -0.29
TRAF4-204ENST00000422344 GAGE10A6NGK3 116 aa13.26□□□□□ -0.29
TRAF4-204ENST00000422344 H0Y8G0 127 aa13.26□□□□□ -0.29
TRAF4-204ENST00000422344 LEPROTL1O95214 131 aa13.26□□□□□ -0.29
TRAF4-204ENST00000422344 RPL37AP8A6NKH3 93 aa13.25□□□□□ -0.29
TRAF4-204ENST00000422344 ZNF861PO60384 105 aa13.25□□□□□ -0.29
TRAF4-204ENST00000422344 SND1-IT1Q9HBX3 110 aa13.25□□□□□ -0.29
TRAF4-204ENST00000422344 COLCA2A8K830 154 aa13.24□□□□□ -0.29
TRAF4-204ENST00000422344 BCE1O60756 84 aa13.23□□□□□ -0.29
TRAF4-204ENST00000422344 RPL28P46779 137 aaKnown RBP13.22□□□□□ -0.29
TRAF4-204ENST00000422344 PRR26Q8N8Z3 221 aa13.22□□□□□ -0.29
TRAF4-204ENST00000422344 LINC00158P58513 81 aa13.21□□□□□ -0.29
TRAF4-204ENST00000422344 LINC00310P59036 64 aa13.21□□□□□ -0.29
TRAF4-204ENST00000422344 RPL24P83731 157 aaKnown RBP13.21□□□□□ -0.29
TRAF4-204ENST00000422344 HSPB8Q9UJY1 196 aa13.21□□□□□ -0.29
TRAF4-204ENST00000422344 IGLV1-50A0A075B6I6 118 aa13.19□□□□□ -0.3
TRAF4-204ENST00000422344 ATP6V1G1O75348 118 aa13.18□□□□□ -0.3
TRAF4-204ENST00000422344 VPREB1P12018 145 aa13.18□□□□□ -0.3
TRAF4-204ENST00000422344 FABP4P15090 132 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms