RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 IGKV2D-28P01615 120 aa9.6□□□□□ -0.87
CTCFL-203ENST00000422109 FAM222AQ5U5X8 452 aa9.6□□□□□ -0.87
CTCFL-203ENST00000422109 CCL18P55774 89 aa9.6□□□□□ -0.87
CTCFL-203ENST00000422109 COPS9Q8WXC6 57 aa9.6□□□□□ -0.87
CTCFL-203ENST00000422109 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
CTCFL-203ENST00000422109 SMIM11BQ8TCY0 68 aa9.58□□□□□ -0.88
CTCFL-203ENST00000422109 A0A087WYN8 130 aa9.57□□□□□ -0.88
CTCFL-203ENST00000422109 J3QKU1 62 aa9.57□□□□□ -0.88
CTCFL-203ENST00000422109 SLPIP03973 132 aa9.57□□□□□ -0.88
CTCFL-203ENST00000422109 X6R8D5 127 aa9.57□□□□□ -0.88
CTCFL-203ENST00000422109 TRAV13-2A0A0B4J235 113 aa9.56□□□□□ -0.88
CTCFL-203ENST00000422109 LY6G6DO95868 133 aa9.56□□□□□ -0.88
CTCFL-203ENST00000422109 LINC00269Q8N2A0 174 aa9.56□□□□□ -0.88
CTCFL-203ENST00000422109 A0A087WZ39 114 aa9.56□□□□□ -0.88
CTCFL-203ENST00000422109 NDUFV3P56181 108 aaKnown RBP9.56□□□□□ -0.88
CTCFL-203ENST00000422109 INAFM1C9JVW0 142 aa9.55□□□□□ -0.88
CTCFL-203ENST00000422109 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
CTCFL-203ENST00000422109 TRRAPQ9Y4A5 3859 aa9.55□□□□□ -0.88
CTCFL-203ENST00000422109 SS18Q15532 418 aa9.55□□□□□ -0.88
CTCFL-203ENST00000422109 GAGE2AQ6NT46 116 aa9.55□□□□□ -0.88
CTCFL-203ENST00000422109 PPDPFQ9H3Y8 114 aa9.55□□□□□ -0.88
CTCFL-203ENST00000422109 DNAL4O96015 105 aa9.54□□□□□ -0.88
CTCFL-203ENST00000422109 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
CTCFL-203ENST00000422109 C9orf116Q5BN46 136 aaPredicted RBP9.54□□□□□ -0.88
CTCFL-203ENST00000422109 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
CTCFL-203ENST00000422109 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
CTCFL-203ENST00000422109 PRO0255Q9UI72 69 aa9.54□□□□□ -0.88
CTCFL-203ENST00000422109 LECT2O14960 151 aa9.53□□□□□ -0.88
CTCFL-203ENST00000422109 CCDC179H3BU77 68 aa9.53□□□□□ -0.88
CTCFL-203ENST00000422109 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
CTCFL-203ENST00000422109 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
CTCFL-203ENST00000422109 KIR2DL5BQ8NHK3 375 aa9.51□□□□□ -0.89
CTCFL-203ENST00000422109 TRACP01848 142 aa9.51□□□□□ -0.89
CTCFL-203ENST00000422109 MALP21145 153 aa9.51□□□□□ -0.89
CTCFL-203ENST00000422109 RPL28P46779 137 aaKnown RBP9.51□□□□□ -0.89
CTCFL-203ENST00000422109 LINC01600Q96MT4 127 aa9.51□□□□□ -0.89
CTCFL-203ENST00000422109 C14orf132Q9NPU4 83 aa9.51□□□□□ -0.89
CTCFL-203ENST00000422109 CELA1Q9UNI1 258 aa9.51□□□□□ -0.89
CTCFL-203ENST00000422109 C22orf24Q9Y442 160 aa9.51□□□□□ -0.89
CTCFL-203ENST00000422109 IBA57-AS1B1ANH7 110 aa9.51□□□□□ -0.89
CTCFL-203ENST00000422109 IGHV4-28A0A0C4DH34 117 aa9.5□□□□□ -0.89
CTCFL-203ENST00000422109 DAD1P61803 113 aa9.5□□□□□ -0.89
CTCFL-203ENST00000422109 NSD1Q96L73 2696 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-203ENST00000422109 TEP1Q99973 2627 aaKnown RBP9.49□□□□□ -0.89
CTCFL-203ENST00000422109 CHCHD10Q8WYQ3 142 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-203ENST00000422109 NCR3O14931 201 aa9.48□□□□□ -0.89
CTCFL-203ENST00000422109 DEFB121Q5J5C9 76 aa9.48□□□□□ -0.89
CTCFL-203ENST00000422109 C6orf223Q8N319 242 aa9.47□□□□□ -0.89
CTCFL-203ENST00000422109 REG3AQ06141 175 aa9.47□□□□□ -0.89
CTCFL-203ENST00000422109 FAM236AA0A1B0GUQ0 79 aa9.46□□□□□ -0.89
CTCFL-203ENST00000422109 FAM236BA0A1B0GV22 79 aa9.46□□□□□ -0.89
CTCFL-203ENST00000422109 HIVEP1P15822 2718 aa9.46□□□□□ -0.89
CTCFL-203ENST00000422109 C9orf66Q5T8R8 295 aa9.45□□□□□ -0.9
CTCFL-203ENST00000422109 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
CTCFL-203ENST00000422109 LINC00612Q8N6U2 182 aa9.45□□□□□ -0.9
CTCFL-203ENST00000422109 C5orf47Q569G3 176 aa9.44□□□□□ -0.9
CTCFL-203ENST00000422109 A0A1B0GUV1 79 aa9.44□□□□□ -0.9
CTCFL-203ENST00000422109 Q8IZM0 81 aa9.44□□□□□ -0.9
CTCFL-203ENST00000422109 KLK12Q9UKR0 248 aa9.44□□□□□ -0.9
CTCFL-203ENST00000422109 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
CTCFL-203ENST00000422109 IGKV3D-7A0A0C4DH55 119 aa9.42□□□□□ -0.9
CTCFL-203ENST00000422109 UNQ6190/PRO20217Q6UXQ8 127 aa9.42□□□□□ -0.9
CTCFL-203ENST00000422109 PKD1L1Q8TDX9 2849 aa9.42□□□□□ -0.9
CTCFL-203ENST00000422109 SMIM9A6NGZ8 99 aa9.42□□□□□ -0.9
CTCFL-203ENST00000422109 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
CTCFL-203ENST00000422109 Q6Q795 121 aa9.42□□□□□ -0.9
CTCFL-203ENST00000422109 CD164L2Q6UWJ8 174 aa9.42□□□□□ -0.9
CTCFL-203ENST00000422109 H0YGX0 51 aa9.41□□□□□ -0.9
CTCFL-203ENST00000422109 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
CTCFL-203ENST00000422109 SDIM1Q6ZPB5 146 aa9.41□□□□□ -0.9
CTCFL-203ENST00000422109 Q8NDZ9 215 aa9.41□□□□□ -0.9
CTCFL-203ENST00000422109 KIAA0087Q14695 138 aa9.41□□□□□ -0.9
CTCFL-203ENST00000422109 APOC4P55056 127 aa9.4□□□□□ -0.9
CTCFL-203ENST00000422109 ACYP1P07311 99 aa9.4□□□□□ -0.9
CTCFL-203ENST00000422109 RETNQ9HD89 108 aa9.4□□□□□ -0.9
CTCFL-203ENST00000422109 KMT2BQ9UMN6 2715 aaPredicted RBP9.39□□□□□ -0.91
CTCFL-203ENST00000422109 IGHV4-30-4P0DP06 118 aa9.39□□□□□ -0.91
CTCFL-203ENST00000422109 MRPL23Q16540 153 aaKnown RBP9.39□□□□□ -0.91
CTCFL-203ENST00000422109 S100A7L2Q5SY68 101 aa9.39□□□□□ -0.91
CTCFL-203ENST00000422109 LINC00643Q86TS7 51 aa9.39□□□□□ -0.91
CTCFL-203ENST00000422109 SPAG11BQ08648 103 aa9.38□□□□□ -0.91
CTCFL-203ENST00000422109 C6orf99Q4VX62 202 aa9.38□□□□□ -0.91
CTCFL-203ENST00000422109 NANOS2P60321 138 aaKnown RBP9.38□□□□□ -0.91
CTCFL-203ENST00000422109 Q8NAQ8 132 aa9.38□□□□□ -0.91
CTCFL-203ENST00000422109 ORMDL1Q9P0S3 153 aa9.38□□□□□ -0.91
CTCFL-203ENST00000422109 TRBV7-7A0A0K0K1E9 115 aa9.37□□□□□ -0.91
CTCFL-203ENST00000422109 SPART-AS1P0CW21 52 aa9.37□□□□□ -0.91
CTCFL-203ENST00000422109 XAGE1AQ9HD64 81 aa9.37□□□□□ -0.91
CTCFL-203ENST00000422109 LINC00846Q9NV44 126 aa9.37□□□□□ -0.91
CTCFL-203ENST00000422109 CXCL5P42830 114 aa9.36□□□□□ -0.91
CTCFL-203ENST00000422109 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
CTCFL-203ENST00000422109 FLNBO75369 2602 aaKnown RBP9.36□□□□□ -0.91
CTCFL-203ENST00000422109 RPL18AQ02543 176 aaKnown RBP9.36□□□□□ -0.91
CTCFL-203ENST00000422109 CYSRT1A8MQ03 144 aa9.36□□□□□ -0.91
CTCFL-203ENST00000422109 F8P00451 2351 aa9.35□□□□□ -0.91
CTCFL-203ENST00000422109 A0A087WVE0 104 aa9.35□□□□□ -0.91
CTCFL-203ENST00000422109 HIGD2BQ4VC39 106 aa9.35□□□□□ -0.91
CTCFL-203ENST00000422109 LOC107984640A0A0U1RRK4 108 aa9.34□□□□□ -0.91
CTCFL-203ENST00000422109 STAB1Q9NY15 2570 aa9.34□□□□□ -0.91
CTCFL-203ENST00000422109 TMEM126AQ9H061 195 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms