RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 WFDC10AQ9H1F0 79 aa11.7□□□□□ -0.54
PKP4-204ENST00000421462 FHL2Q14192 279 aa11.69□□□□□ -0.54
PKP4-204ENST00000421462 APCP25054 2843 aa11.68□□□□□ -0.54
PKP4-204ENST00000421462 TMEM258P61165 79 aa11.68□□□□□ -0.54
PKP4-204ENST00000421462 C20orf197Q8N268 126 aa11.68□□□□□ -0.54
PKP4-204ENST00000421462 TRBV10-1A0A0K0K1A3 114 aa11.68□□□□□ -0.54
PKP4-204ENST00000421462 MTORP42345 2549 aa11.67□□□□□ -0.54
PKP4-204ENST00000421462 A0A096LPF7 62 aa11.67□□□□□ -0.54
PKP4-204ENST00000421462 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
PKP4-204ENST00000421462 NBPF19A0A087WUL8 3843 aa11.66□□□□□ -0.54
PKP4-204ENST00000421462 A8MTW9 85 aa11.66□□□□□ -0.54
PKP4-204ENST00000421462 FAM19A3Q7Z5A8 133 aa11.66□□□□□ -0.54
PKP4-204ENST00000421462 LINC01356Q8N9X3 169 aa11.66□□□□□ -0.54
PKP4-204ENST00000421462 IGHV3OR16-9A0A0B4J2B5 98 aa11.65□□□□□ -0.54
PKP4-204ENST00000421462 SS18Q15532 418 aa11.65□□□□□ -0.54
PKP4-204ENST00000421462 CCKP06307 115 aa11.64□□□□□ -0.55
PKP4-204ENST00000421462 IBA57-AS1B1ANH7 110 aa11.63□□□□□ -0.55
PKP4-204ENST00000421462 RPS28P62857 69 aaKnown RBP11.63□□□□□ -0.55
PKP4-204ENST00000421462 TRBV6-4A0A1B0GX49 114 aa11.63□□□□□ -0.55
PKP4-204ENST00000421462 DEFB130BP0DP73 79 aa11.62□□□□□ -0.55
PKP4-204ENST00000421462 DEFB130AP0DP74 79 aa11.62□□□□□ -0.55
PKP4-204ENST00000421462 OBSCN-AS1Q96MR7 158 aa11.62□□□□□ -0.55
PKP4-204ENST00000421462 TMEM86BQ8N661 226 aa11.61□□□□□ -0.55
PKP4-204ENST00000421462 C9orf116Q5BN46 136 aaPredicted RBP11.61□□□□□ -0.55
PKP4-204ENST00000421462 Q6YL49 198 aa11.6□□□□□ -0.55
PKP4-204ENST00000421462 CR1P17927 2039 aa11.6□□□□□ -0.55
PKP4-204ENST00000421462 IGLV10-54A0A075B6I4 117 aa11.6□□□□□ -0.55
PKP4-204ENST00000421462 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
PKP4-204ENST00000421462 HAMPP81172 84 aa11.59□□□□□ -0.55
PKP4-204ENST00000421462 ACANP16112 2415 aa11.59□□□□□ -0.55
PKP4-204ENST00000421462 A0A087WZ39 114 aa11.58□□□□□ -0.55
PKP4-204ENST00000421462 LINC00959A0A1B0GUT2 108 aa11.58□□□□□ -0.56
PKP4-204ENST00000421462 Q8N814 137 aa11.58□□□□□ -0.56
PKP4-204ENST00000421462 UBL5Q9BZL1 73 aa11.58□□□□□ -0.56
PKP4-204ENST00000421462 C4orf3Q8WVX3 66 aa11.57□□□□□ -0.56
PKP4-204ENST00000421462 C6orf99Q4VX62 202 aa11.57□□□□□ -0.56
PKP4-204ENST00000421462 LAMTOR3Q9UHA4 124 aa11.57□□□□□ -0.56
PKP4-204ENST00000421462 SNURFQ9Y675 71 aa11.57□□□□□ -0.56
PKP4-204ENST00000421462 IL17DQ8TAD2 202 aa11.56□□□□□ -0.56
PKP4-204ENST00000421462 A0A096LNT2 108 aa11.55□□□□□ -0.56
PKP4-204ENST00000421462 M0R2N4 97 aa11.55□□□□□ -0.56
PKP4-204ENST00000421462 PRB1P04280 392 aa11.55□□□□□ -0.56
PKP4-204ENST00000421462 S100A7L2Q5SY68 101 aa11.55□□□□□ -0.56
PKP4-204ENST00000421462 JMJD7-PLA2G4BH0Y9G9 81 aa11.54□□□□□ -0.56
PKP4-204ENST00000421462 IGSF10Q6WRI0 2623 aa11.54□□□□□ -0.56
PKP4-204ENST00000421462 TMEM256-PLSCR3K7ERE1 68 aa11.54□□□□□ -0.56
PKP4-204ENST00000421462 Q5XG85 94 aa11.54□□□□□ -0.56
PKP4-204ENST00000421462 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
PKP4-204ENST00000421462 SCXQ7RTU7 201 aa11.53□□□□□ -0.56
PKP4-204ENST00000421462 LINC00269Q8N2A0 174 aa11.53□□□□□ -0.56
PKP4-204ENST00000421462 ESM1Q9NQ30 184 aa11.52□□□□□ -0.56
PKP4-204ENST00000421462 PLAC8L1A1L4L8 177 aa11.51□□□□□ -0.57
PKP4-204ENST00000421462 GIG44P09565 113 aaPredicted RBP11.51□□□□□ -0.57
PKP4-204ENST00000421462 Q8N3U1 123 aa11.51□□□□□ -0.57
PKP4-204ENST00000421462 ZNF462Q96JM2 2506 aa11.51□□□□□ -0.57
PKP4-204ENST00000421462 GYPEP15421 78 aa11.51□□□□□ -0.57
PKP4-204ENST00000421462 FAM236DA0A1B0GTK5 79 aa11.5□□□□□ -0.57
PKP4-204ENST00000421462 CCL24O00175 119 aa11.5□□□□□ -0.57
PKP4-204ENST00000421462 FAM236CP0DP71 79 aa11.5□□□□□ -0.57
PKP4-204ENST00000421462 C16orf74Q96GX8 76 aa11.5□□□□□ -0.57
PKP4-204ENST00000421462 LY6G6DO95868 133 aa11.49□□□□□ -0.57
PKP4-204ENST00000421462 SPATA3Q8NHX4 192 aa11.49□□□□□ -0.57
PKP4-204ENST00000421462 ZNF469Q96JG9 3925 aaPredicted RBP11.49□□□□□ -0.57
PKP4-204ENST00000421462 HIVEP2P31629 2446 aa11.49□□□□□ -0.57
PKP4-204ENST00000421462 TRAV10A0A0B4J240 114 aa11.49□□□□□ -0.57
PKP4-204ENST00000421462 RBM3P98179 157 aaKnown RBP11.49□□□□□ -0.57
PKP4-204ENST00000421462 TRAV25A0A0B4J276 109 aa11.48□□□□□ -0.57
PKP4-204ENST00000421462 WFDC11Q8NEX6 87 aa11.48□□□□□ -0.57
PKP4-204ENST00000421462 RMI2Q96E14 147 aa11.48□□□□□ -0.57
PKP4-204ENST00000421462 Q8NDZ9 215 aa11.48□□□□□ -0.57
PKP4-204ENST00000421462 J3QLI3 93 aa11.47□□□□□ -0.57
PKP4-204ENST00000421462 NDUFC2O95298 119 aa11.47□□□□□ -0.57
PKP4-204ENST00000421462 FLNAP21333 2647 aaKnown RBP11.47□□□□□ -0.57
PKP4-204ENST00000421462 IGHV4-31P0DP07 118 aa11.46□□□□□ -0.57
PKP4-204ENST00000421462 DSCR9P59020 149 aa11.45□□□□□ -0.58
PKP4-204ENST00000421462 ZNF843Q8N446 348 aa11.45□□□□□ -0.58
PKP4-204ENST00000421462 ITPR3Q14573 2671 aa11.44□□□□□ -0.58
PKP4-204ENST00000421462 ATP5EP2Q5VTU8 51 aa11.44□□□□□ -0.58
PKP4-204ENST00000421462 Q8IZM0 81 aa11.44□□□□□ -0.58
PKP4-204ENST00000421462 ANGP03950 147 aaKnown RBP11.44□□□□□ -0.58
PKP4-204ENST00000421462 LINC01547P58512 204 aaPredicted RBP11.44□□□□□ -0.58
PKP4-204ENST00000421462 C6orf223Q8N319 242 aa11.44□□□□□ -0.58
PKP4-204ENST00000421462 DEFB4AO15263 64 aa11.43□□□□□ -0.58
PKP4-204ENST00000421462 Q6ZQY7 126 aa11.43□□□□□ -0.58
PKP4-204ENST00000421462 F8WEM9 126 aa11.42□□□□□ -0.58
PKP4-204ENST00000421462 H7BZZ5 65 aa11.42□□□□□ -0.58
PKP4-204ENST00000421462 BBC3Q96PG8 261 aaPredicted RBP11.42□□□□□ -0.58
PKP4-204ENST00000421462 KRTAP10-9P60411 292 aa11.41□□□□□ -0.58
PKP4-204ENST00000421462 Q6ZVQ6 151 aa11.41□□□□□ -0.58
PKP4-204ENST00000421462 Q6ZQT0 140 aa11.41□□□□□ -0.58
PKP4-204ENST00000421462 LINC00575Q6W349 94 aa11.4□□□□□ -0.58
PKP4-204ENST00000421462 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
PKP4-204ENST00000421462 LINC00167Q96N53 147 aa11.4□□□□□ -0.58
PKP4-204ENST00000421462 C10orf25Q5T742 122 aa11.4□□□□□ -0.58
PKP4-204ENST00000421462 UNQ6190/PRO20217Q6UXQ8 127 aa11.39□□□□□ -0.59
PKP4-204ENST00000421462 LINC01006Q8NI28 216 aa11.39□□□□□ -0.59
PKP4-204ENST00000421462 LINC00336Q6ZUF6 198 aa11.39□□□□□ -0.59
PKP4-204ENST00000421462 TRAV7A0A075B6U4 112 aa11.38□□□□□ -0.59
PKP4-204ENST00000421462 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
PKP4-204ENST00000421462 FSHBP01225 129 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms