RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 IGLV1-51P01701 117 aa8.11□□□□□ -1.11
PTCH1-205ENST00000418258 POM121L12Q8N7R1 296 aa8.1□□□□□ -1.11
PTCH1-205ENST00000418258 ATP5EP56381 51 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-205ENST00000418258 C11orf21Q9P2W6 132 aa8.1□□□□□ -1.11
PTCH1-205ENST00000418258 MUC7Q8TAX7 377 aa8.1□□□□□ -1.11
PTCH1-205ENST00000418258 MRPS12O15235 138 aaKnown RBP8.1□□□□□ -1.11
PTCH1-205ENST00000418258 ODF3L2Q3SX64 289 aa8.1□□□□□ -1.11
PTCH1-205ENST00000418258 CRIP2P52943 208 aaPredicted RBP8.09□□□□□ -1.11
PTCH1-205ENST00000418258 EGFEM1PQ0D2K5 195 aa8.08□□□□□ -1.12
PTCH1-205ENST00000418258 POLR2KP53803 58 aaKnown RBP8.08□□□□□ -1.12
PTCH1-205ENST00000418258 ANKRD11Q6UB99 2663 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-205ENST00000418258 COX6A2Q02221 97 aa8.08□□□□□ -1.12
PTCH1-205ENST00000418258 PRR3P79522 188 aaKnown RBP8.07□□□□□ -1.12
PTCH1-205ENST00000418258 CELA1Q9UNI1 258 aa8.07□□□□□ -1.12
PTCH1-205ENST00000418258 ZNF462Q96JM2 2506 aa8.07□□□□□ -1.12
PTCH1-205ENST00000418258 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
PTCH1-205ENST00000418258 C16orf95Q9H693 158 aa8.07□□□□□ -1.12
PTCH1-205ENST00000418258 NHLRC4P0CG21 123 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-205ENST00000418258 SPTBN4Q9H254 2564 aa8.07□□□□□ -1.12
PTCH1-205ENST00000418258 GAS8-AS1O95177 125 aa8.06□□□□□ -1.12
PTCH1-205ENST00000418258 Q9BRP9 147 aa8.06□□□□□ -1.12
PTCH1-205ENST00000418258 CHCHD7Q9BUK0 85 aa8.06□□□□□ -1.12
PTCH1-205ENST00000418258 FHL2Q14192 279 aa8.06□□□□□ -1.12
PTCH1-205ENST00000418258 IGLV4-60A0A075B6I1 120 aa8.05□□□□□ -1.12
PTCH1-205ENST00000418258 LINC00337Q8N6G1 96 aa8.05□□□□□ -1.12
PTCH1-205ENST00000418258 Q8N814 137 aa8.04□□□□□ -1.12
PTCH1-205ENST00000418258 C2orf48Q96LS8 159 aa8.04□□□□□ -1.12
PTCH1-205ENST00000418258 TRBV7-6A0A0J9YX20 115 aa8.04□□□□□ -1.12
PTCH1-205ENST00000418258 LINC00242Q5T6M2 205 aa8.04□□□□□ -1.12
PTCH1-205ENST00000418258 LINC01547P58512 204 aaPredicted RBP8.03□□□□□ -1.12
PTCH1-205ENST00000418258 PCSK5Q92824 1860 aa8.03□□□□□ -1.12
PTCH1-205ENST00000418258 NTM-AS1Q6ZSK4 140 aa8.03□□□□□ -1.12
PTCH1-205ENST00000418258 USP9XQ93008 2570 aaPredicted RBP8.03□□□□□ -1.12
PTCH1-205ENST00000418258 SPINK1P00995 79 aa8.02□□□□□ -1.12
PTCH1-205ENST00000418258 LINC00208Q96KT6 92 aa8.02□□□□□ -1.13
PTCH1-205ENST00000418258 F8P00451 2351 aa8.02□□□□□ -1.13
PTCH1-205ENST00000418258 LINC00694P0DN24 101 aa8.02□□□□□ -1.13
PTCH1-205ENST00000418258 SBSPONQ8IVN8 264 aa8.02□□□□□ -1.13
PTCH1-205ENST00000418258 LYPD5Q6UWN5 251 aa8.01□□□□□ -1.13
PTCH1-205ENST00000418258 IMUPQ9GZP8 106 aa8.01□□□□□ -1.13
PTCH1-205ENST00000418258 ACANP16112 2415 aa8.01□□□□□ -1.13
PTCH1-205ENST00000418258 IGIPA6NJ69 53 aa8.01□□□□□ -1.13
PTCH1-205ENST00000418258 LIMD2Q9BT23 127 aa8.01□□□□□ -1.13
PTCH1-205ENST00000418258 DEFB116Q30KQ4 102 aa8.01□□□□□ -1.13
PTCH1-205ENST00000418258 SMIM1B2RUZ4 78 aa8□□□□□ -1.13
PTCH1-205ENST00000418258 Q6JHZ5 121 aa8□□□□□ -1.13
PTCH1-205ENST00000418258 FHL3Q13643 280 aa8□□□□□ -1.13
PTCH1-205ENST00000418258 CNFNQ9BYD5 112 aa8□□□□□ -1.13
PTCH1-205ENST00000418258 C2orf91Q6ZV80 131 aa7.99□□□□□ -1.13
PTCH1-205ENST00000418258 A0A087WYN8 130 aa7.98□□□□□ -1.13
PTCH1-205ENST00000418258 PRLHP81277 87 aa7.98□□□□□ -1.13
PTCH1-205ENST00000418258 F8WDY8 70 aa7.98□□□□□ -1.13
PTCH1-205ENST00000418258 PKD1L2Q7Z442 2459 aa7.98□□□□□ -1.13
PTCH1-205ENST00000418258 LINC00575Q6W349 94 aa7.98□□□□□ -1.13
PTCH1-205ENST00000418258 PCOTHQ58A44 107 aa7.97□□□□□ -1.13
PTCH1-205ENST00000418258 MDFIQ99750 246 aa7.97□□□□□ -1.13
PTCH1-205ENST00000418258 Q6Q795 121 aa7.97□□□□□ -1.13
PTCH1-205ENST00000418258 A0A087WSZ3 146 aa7.96□□□□□ -1.14
PTCH1-205ENST00000418258 A0A1B0GUV1 79 aa7.96□□□□□ -1.14
PTCH1-205ENST00000418258 COX7CP15954 63 aa7.95□□□□□ -1.14
PTCH1-205ENST00000418258 XGP55808 180 aa7.95□□□□□ -1.14
PTCH1-205ENST00000418258 A0A1W2PPR1 153 aa7.95□□□□□ -1.14
PTCH1-205ENST00000418258 CSDC2Q9Y534 153 aaKnown RBP7.95□□□□□ -1.14
PTCH1-205ENST00000418258 Q6ZSN1 163 aa7.95□□□□□ -1.14
PTCH1-205ENST00000418258 H0Y9P7 68 aa7.95□□□□□ -1.14
PTCH1-205ENST00000418258 TRAV7A0A075B6U4 112 aa7.94□□□□□ -1.14
PTCH1-205ENST00000418258 A8MTW9 85 aa7.94□□□□□ -1.14
PTCH1-205ENST00000418258 Q6ZRU5 148 aa7.94□□□□□ -1.14
PTCH1-205ENST00000418258 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
PTCH1-205ENST00000418258 IGKV2D-30A0A075B6S6 120 aa7.93□□□□□ -1.14
PTCH1-205ENST00000418258 IGKV2-30P06310 120 aa7.93□□□□□ -1.14
PTCH1-205ENST00000418258 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
PTCH1-205ENST00000418258 HCG22E2RYF7 251 aa7.91□□□□□ -1.14
PTCH1-205ENST00000418258 ADAMTSL4-AS1Q5T5F5 129 aa7.91□□□□□ -1.14
PTCH1-205ENST00000418258 C7orf65Q6ZTY9 151 aa7.91□□□□□ -1.14
PTCH1-205ENST00000418258 C22orf24Q9Y442 160 aa7.91□□□□□ -1.14
PTCH1-205ENST00000418258 BEAN1Q3B7T3 259 aa7.91□□□□□ -1.14
PTCH1-205ENST00000418258 YPEL4Q96NS1 127 aa7.91□□□□□ -1.14
PTCH1-205ENST00000418258 CCDC179H3BU77 68 aa7.9□□□□□ -1.14
PTCH1-205ENST00000418258 POLQO75417 2590 aa7.9□□□□□ -1.14
PTCH1-205ENST00000418258 USP9YO00507 2555 aaPredicted RBP7.9□□□□□ -1.15
PTCH1-205ENST00000418258 AMELXQ99217 191 aa7.9□□□□□ -1.15
PTCH1-205ENST00000418258 SMCR5Q8TEV8 140 aa7.89□□□□□ -1.15
PTCH1-205ENST00000418258 TSPEAR-AS2P59090 65 aa7.89□□□□□ -1.15
PTCH1-205ENST00000418258 ZNF580Q9UK33 172 aa7.89□□□□□ -1.15
PTCH1-205ENST00000418258 MOBPQ13875 183 aa7.89□□□□□ -1.15
PTCH1-205ENST00000418258 Q8N2B8 174 aa7.89□□□□□ -1.15
PTCH1-205ENST00000418258 Q8N3U1 123 aa7.89□□□□□ -1.15
PTCH1-205ENST00000418258 FASNP49327 2511 aaKnown RBP7.88□□□□□ -1.15
PTCH1-205ENST00000418258 SOSTDC1Q6X4U4 206 aa7.88□□□□□ -1.15
PTCH1-205ENST00000418258 C16orf90A8MZG2 172 aa7.88□□□□□ -1.15
PTCH1-205ENST00000418258 CHD8Q9HCK8 2581 aa7.87□□□□□ -1.15
PTCH1-205ENST00000418258 MTORP42345 2549 aa7.87□□□□□ -1.15
PTCH1-205ENST00000418258 hDV103S1A0JD37 113 aa7.87□□□□□ -1.15
PTCH1-205ENST00000418258 TRBV7-7A0A0K0K1E9 115 aa7.87□□□□□ -1.15
PTCH1-205ENST00000418258 CRYGAP11844 174 aa7.87□□□□□ -1.15
PTCH1-205ENST00000418258 BPTFQ12830 3046 aa7.86□□□□□ -1.15
PTCH1-205ENST00000418258 LINC01561Q8N1V8 128 aa7.86□□□□□ -1.15
PTCH1-205ENST00000418258 PMAIP1Q13794 54 aa7.86□□□□□ -1.15
PTCH1-205ENST00000418258 A0A087WVE0 104 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms