RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 CFC1BP0CG36 223 aa13.94□□□□□ -0.18
CASC3-203ENST00000418132 CFC1P0CG37 223 aa13.94□□□□□ -0.18
CASC3-203ENST00000418132 KRTAP26-1Q6PEX3 210 aa13.94□□□□□ -0.18
CASC3-203ENST00000418132 UBE2DNLQ8IWF7 75 aa13.94□□□□□ -0.18
CASC3-203ENST00000418132 COX7B2Q8TF08 81 aa13.94□□□□□ -0.18
CASC3-203ENST00000418132 LITAFQ99732 161 aa13.94□□□□□ -0.18
CASC3-203ENST00000418132 PGPEP1Q9NXJ5 209 aa13.94□□□□□ -0.18
CASC3-203ENST00000418132 MUSTN1Q8IVN3 82 aa13.94□□□□□ -0.18
CASC3-203ENST00000418132 ZNF625Q96I27 306 aaPredicted RBP13.92□□□□□ -0.18
CASC3-203ENST00000418132 MUC7Q8TAX7 377 aa13.92□□□□□ -0.18
CASC3-203ENST00000418132 TOMM7Q9P0U1 55 aa13.92□□□□□ -0.18
CASC3-203ENST00000418132 A4D1N5 150 aa13.91□□□□□ -0.18
CASC3-203ENST00000418132 MALP21145 153 aa13.91□□□□□ -0.18
CASC3-203ENST00000418132 ADAMTSL4-AS1Q5T5F5 129 aa13.91□□□□□ -0.18
CASC3-203ENST00000418132 C1orf43Q9BWL3 253 aa13.91□□□□□ -0.18
CASC3-203ENST00000418132 TSPAN13O95857 204 aa13.9□□□□□ -0.18
CASC3-203ENST00000418132 RPL24P83731 157 aaKnown RBP13.9□□□□□ -0.18
CASC3-203ENST00000418132 Q8IZM0 81 aa13.9□□□□□ -0.18
CASC3-203ENST00000418132 PLECQ15149 4684 aaKnown RBP13.89□□□□□ -0.19
CASC3-203ENST00000418132 STARD9Q9P2P6 4700 aa13.89□□□□□ -0.19
CASC3-203ENST00000418132 WWC2-AS2Q96NR7 200 aa13.88□□□□□ -0.19
CASC3-203ENST00000418132 SPANXDQ9BXN6 97 aa13.88□□□□□ -0.19
CASC3-203ENST00000418132 Q9HAA7 133 aa13.88□□□□□ -0.19
CASC3-203ENST00000418132 SPANXCQ9NY87 97 aa13.88□□□□□ -0.19
CASC3-203ENST00000418132 EIF4EBP3O60516 100 aaPredicted RBP13.87□□□□□ -0.19
CASC3-203ENST00000418132 PRSS2P07478 247 aa13.87□□□□□ -0.19
CASC3-203ENST00000418132 HERV-K104P63124 156 aa13.87□□□□□ -0.19
CASC3-203ENST00000418132 KIAA0087Q14695 138 aa13.87□□□□□ -0.19
CASC3-203ENST00000418132 IGKV2D-24A0A075B6R9 120 aa13.87□□□□□ -0.19
CASC3-203ENST00000418132 C6orf226Q5I0X4 101 aa13.87□□□□□ -0.19
CASC3-203ENST00000418132 PRO1854Q9UHT4 67 aa13.87□□□□□ -0.19
CASC3-203ENST00000418132 SFTA2Q6UW10 78 aa13.85□□□□□ -0.19
CASC3-203ENST00000418132 TIMM17BO60830 172 aa13.85□□□□□ -0.19
CASC3-203ENST00000418132 H3BMG7 143 aa13.84□□□□□ -0.19
CASC3-203ENST00000418132 KRTAP1-5Q9BYS1 174 aa13.84□□□□□ -0.19
CASC3-203ENST00000418132 LYSTQ99698 3801 aa13.83□□□□□ -0.19
CASC3-203ENST00000418132 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.83□□□□□ -0.2
CASC3-203ENST00000418132 A0A0B4J2C4 111 aa13.83□□□□□ -0.2
CASC3-203ENST00000418132 RMI2Q96E14 147 aa13.83□□□□□ -0.2
CASC3-203ENST00000418132 LOC107984156A0A0G2JMH3 177 aa13.82□□□□□ -0.2
CASC3-203ENST00000418132 NPC2P61916 151 aa13.82□□□□□ -0.2
CASC3-203ENST00000418132 ARL17AQ8IVW1 177 aa13.82□□□□□ -0.2
CASC3-203ENST00000418132 CXCL5P42830 114 aa13.82□□□□□ -0.2
CASC3-203ENST00000418132 SPAG11BQ08648 103 aa13.82□□□□□ -0.2
CASC3-203ENST00000418132 OCIAD2Q56VL3 154 aa13.82□□□□□ -0.2
CASC3-203ENST00000418132 CFAP161Q6P656 301 aa13.82□□□□□ -0.2
CASC3-203ENST00000418132 DAND5Q8N907 189 aa13.82□□□□□ -0.2
CASC3-203ENST00000418132 CIRBPQ14011 172 aaKnown RBP13.81□□□□□ -0.2
CASC3-203ENST00000418132 CKS1BP61024 79 aa13.8□□□□□ -0.2
CASC3-203ENST00000418132 C2orf82Q6UX34 121 aa13.8□□□□□ -0.2
CASC3-203ENST00000418132 DNAH1Q9P2D7 4330 aa13.8□□□□□ -0.2
CASC3-203ENST00000418132 MEIG1Q5JSS6 88 aa13.79□□□□□ -0.2
CASC3-203ENST00000418132 C15orf56Q8N910 161 aa13.79□□□□□ -0.2
CASC3-203ENST00000418132 F8W1H4 67 aa13.78□□□□□ -0.2
CASC3-203ENST00000418132 IFITM1P13164 125 aa13.78□□□□□ -0.2
CASC3-203ENST00000418132 TTC32Q5I0X7 151 aa13.78□□□□□ -0.2
CASC3-203ENST00000418132 ERG28Q9UKR5 140 aa13.78□□□□□ -0.2
CASC3-203ENST00000418132 A0A0U1RRA0 63 aa13.76□□□□□ -0.21
CASC3-203ENST00000418132 NBDYA0A0U1RRE5 68 aa13.76□□□□□ -0.21
CASC3-203ENST00000418132 H7C2G1 150 aa13.76□□□□□ -0.21
CASC3-203ENST00000418132 PSMB2P49721 201 aa13.76□□□□□ -0.21
CASC3-203ENST00000418132 C6orf223Q8N319 242 aa13.76□□□□□ -0.21
CASC3-203ENST00000418132 NTN5Q8WTR8 489 aaPredicted RBP13.76□□□□□ -0.21
CASC3-203ENST00000418132 LYRM7Q5U5X0 104 aa13.76□□□□□ -0.21
CASC3-203ENST00000418132 LINC00526Q96FQ7 95 aa13.76□□□□□ -0.21
CASC3-203ENST00000418132 WFDC2Q14508 124 aa13.75□□□□□ -0.21
CASC3-203ENST00000418132 VPS13DQ5THJ4 4388 aa13.75□□□□□ -0.21
CASC3-203ENST00000418132 CASC10Q5T4H9 136 aa13.74□□□□□ -0.21
CASC3-203ENST00000418132 GVQW2A0A096LPI5 108 aaPredicted RBP13.74□□□□□ -0.21
CASC3-203ENST00000418132 ZNF561-AS1K7EIQ3 104 aa13.74□□□□□ -0.21
CASC3-203ENST00000418132 SCGB1C2P0DMR2 95 aa13.74□□□□□ -0.21
CASC3-203ENST00000418132 HIGD2BQ4VC39 106 aa13.74□□□□□ -0.21
CASC3-203ENST00000418132 MTURNQ8N3F0 131 aa13.74□□□□□ -0.21
CASC3-203ENST00000418132 LINC00308Q8TCZ7 52 aa13.74□□□□□ -0.21
CASC3-203ENST00000418132 PRO0461Q9UI25 63 aa13.74□□□□□ -0.21
CASC3-203ENST00000418132 TCL1BO95988 128 aa13.72□□□□□ -0.21
CASC3-203ENST00000418132 UNQ6190/PRO20217Q6UXQ8 127 aa13.72□□□□□ -0.21
CASC3-203ENST00000418132 K7ERU9 68 aa13.72□□□□□ -0.21
CASC3-203ENST00000418132 Q1RN00 199 aa13.72□□□□□ -0.21
CASC3-203ENST00000418132 C10orf25Q5T742 122 aa13.72□□□□□ -0.21
CASC3-203ENST00000418132 TRBV20-1A0A075B6N2 111 aa13.71□□□□□ -0.21
CASC3-203ENST00000418132 C3orf84H3BNL1 204 aa13.71□□□□□ -0.21
CASC3-203ENST00000418132 C2orf48Q96LS8 159 aa13.71□□□□□ -0.21
CASC3-203ENST00000418132 LINC00158P58513 81 aa13.71□□□□□ -0.22
CASC3-203ENST00000418132 PFN2P35080 140 aa13.7□□□□□ -0.22
CASC3-203ENST00000418132 USP17L23D6RBM5 183 aa13.69□□□□□ -0.22
CASC3-203ENST00000418132 COX17Q14061 63 aa13.69□□□□□ -0.22
CASC3-203ENST00000418132 RNF151Q2KHN1 245 aa13.69□□□□□ -0.22
CASC3-203ENST00000418132 SOSTDC1Q6X4U4 206 aa13.69□□□□□ -0.22
CASC3-203ENST00000418132 MIR7-3HGQ8N6C7 128 aa13.69□□□□□ -0.22
CASC3-203ENST00000418132 F8WDY8 70 aa13.69□□□□□ -0.22
CASC3-203ENST00000418132 CAMK2N2Q96S95 79 aa13.68□□□□□ -0.22
CASC3-203ENST00000418132 PPDPFQ9H3Y8 114 aa13.68□□□□□ -0.22
CASC3-203ENST00000418132 C9orf116Q5BN46 136 aaPredicted RBP13.67□□□□□ -0.22
CASC3-203ENST00000418132 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
CASC3-203ENST00000418132 TRBV30A0A0K0K1B3 111 aa13.67□□□□□ -0.22
CASC3-203ENST00000418132 TRIAP1O43715 76 aa13.66□□□□□ -0.22
CASC3-203ENST00000418132 C6orf48Q9UBA6 75 aa13.66□□□□□ -0.22
CASC3-203ENST00000418132 SMCPP49901 116 aaPredicted RBP13.65□□□□□ -0.22
CASC3-203ENST00000418132 ETDBQ3ZM63 59 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms