RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 IGKV2D-26A0A0A0MRZ7 120 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 TINCRA0A1B0GVN0 87 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 TMEM223A0PJW6 202 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 H3BNG1 76 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 LEPROTO15243 131 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 DLEU1O43261 78 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 CRPP02741 224 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 ANGP03950 147 aaKnown RBP2.57□□□□□ -2
HMGB3P20-201ENST00000417997 HERVK_113P63121 156 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 SS18Q15532 418 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 MPV17L2Q567V2 206 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 LELP1Q5T871 98 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 CLPSL2Q6UWE3 100 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 PCP2Q8IVA1 136 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 B9D2Q9BPU9 175 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 CDC42SE2Q9NRR3 84 aa2.57□□□□□ -2
HMGB3P20-201ENST00000417997 TEP1Q99973 2627 aaKnown RBP2.57□□□□□ -2
HMGB3P20-201ENST00000417997 IGLV4-60A0A075B6I1 120 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 MYMXA0A1B0GTQ4 84 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 J3QQQ9 107 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 SIVA1O15304 175 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 SPINK8P0C7L1 97 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
HMGB3P20-201ENST00000417997 RBX1P62877 108 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 HSD52Q0P140 79 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 BOD1L2Q8IYS8 172 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 C15orf53Q8NAA6 179 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 TTTY13Q9BZ97 58 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 HIGD1BQ9P298 99 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 MRPS16Q9Y3D3 137 aaKnown RBP2.56□□□□□ -2
HMGB3P20-201ENST00000417997 CBY1Q9Y3M2 126 aa2.56□□□□□ -2
HMGB3P20-201ENST00000417997 TRAV8-3A0A0A6YYJ7 113 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 IGHV1-58A0A0C4DH39 117 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 LINC00959A0A1B0GUT2 108 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 A6NDN8 102 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 TMEM238C9JI98 176 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 CCL25O15444 150 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 IGHV3-30P01768 117 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 IGHV3-33P01772 117 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 IGHV3-30-3P0DP02 117 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 IGHV3-30-5P0DP03 117 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 NF1P21359 2839 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 REG3AQ06141 175 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 TAL2Q16559 108 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 COL5A1-AS1Q5SY13 56 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 LINC00242Q5T6M2 205 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 LYPD5Q6UWN5 251 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 C2orf91Q6ZV80 131 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 HIST1H4GQ99525 98 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 SNHG12Q9BXW3 62 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 TOMM7Q9P0U1 55 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 CDKN2A-AS1Q9UH64 79 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 NDUFA12Q9UI09 145 aa2.55□□□□□ -2
HMGB3P20-201ENST00000417997 IGLL5B9A064 214 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 APOMO95445 188 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 XCL1P47992 114 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 CCL18P55774 89 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 NDUFV3P56181 108 aaKnown RBP2.54□□□□□ -2
HMGB3P20-201ENST00000417997 TSPEAR-AS2P59090 65 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 COX6A2Q02221 97 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 SRSF9Q13242 221 aaKnown RBP eCLIP2.54□□□□□ -2
HMGB3P20-201ENST00000417997 KRTAP21-3Q3LHN1 58 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 MEIG1Q5JSS6 88 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 BVES-AS1Q5T3Y7 98 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 ZFAND6Q6FIF0 208 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 REG3GQ6UW15 175 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 FAM19A3Q7Z5A8 133 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 WFDC10BQ8IUB3 73 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 UBE2DNLQ8IWF7 75 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 CEND1Q8N111 149 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 LINC00269Q8N2A0 174 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 ORAOV1Q8WV07 137 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 FAM104AQ969W3 186 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 UBE2WQ96B02 151 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 KLK12Q9UKR0 248 aa2.54□□□□□ -2
HMGB3P20-201ENST00000417997 ATRQ13535 2644 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 IGLV10-54A0A075B6I4 117 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 NUPR2A6NF83 97 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 COX7A2LO14548 114 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 NDUFA1O15239 70 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 HERV-K104P63124 156 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 CIRBPQ14011 172 aaKnown RBP2.53□□□□□ -2
HMGB3P20-201ENST00000417997 ESRGQ1W209 222 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 SFTA2Q6UW10 78 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 C5orf38Q86SI9 138 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 COX7B2Q8TF08 81 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 CHCHD10Q8WYQ3 142 aaPredicted RBP2.53□□□□□ -2
HMGB3P20-201ENST00000417997 SPANXB1Q9NS25 103 aaPredicted RBP2.53□□□□□ -2
HMGB3P20-201ENST00000417997 NHP2Q9NX24 153 aaKnown RBP2.53□□□□□ -2
HMGB3P20-201ENST00000417997 PRO0461Q9UI25 63 aa2.53□□□□□ -2
HMGB3P20-201ENST00000417997 KLK5Q9Y337 293 aaPredicted RBP2.53□□□□□ -2
HMGB3P20-201ENST00000417997 SETD2Q9BYW2 2564 aaPredicted RBP2.53□□□□□ -2.01
HMGB3P20-201ENST00000417997 FBN1P35555 2871 aaKnown RBP2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 FLNBO75369 2602 aaKnown RBP2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A087WZ39 114 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 TRAV8-4A0A0B4J246 113 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 IGHV3OR16-9A0A0B4J2B5 98 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A0J9YXY3 114 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 CXCL5P42830 114 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 CKS1BP61024 79 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms