RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 LEPROTO15243 131 aa8.66□□□□□ -1.02
TGFBR3-203ENST00000417833 SS18Q15532 418 aa8.66□□□□□ -1.02
TGFBR3-203ENST00000417833 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
TGFBR3-203ENST00000417833 USP17L23D6RBM5 183 aa8.65□□□□□ -1.02
TGFBR3-203ENST00000417833 KRTAP10-1P60331 282 aa8.65□□□□□ -1.02
TGFBR3-203ENST00000417833 IGHV1-58A0A0C4DH39 117 aa8.64□□□□□ -1.03
TGFBR3-203ENST00000417833 LINC00959A0A1B0GUT2 108 aa8.64□□□□□ -1.03
TGFBR3-203ENST00000417833 LGALS3P17931 250 aaKnown RBP8.64□□□□□ -1.03
TGFBR3-203ENST00000417833 PCP2Q8IVA1 136 aa8.64□□□□□ -1.03
TGFBR3-203ENST00000417833 DNAH5Q8TE73 4624 aa8.64□□□□□ -1.03
TGFBR3-203ENST00000417833 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.63□□□□□ -1.03
TGFBR3-203ENST00000417833 IGKV3OR2-268A0A0C4DH90 116 aa8.63□□□□□ -1.03
TGFBR3-203ENST00000417833 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
TGFBR3-203ENST00000417833 J3QQQ9 107 aa8.63□□□□□ -1.03
TGFBR3-203ENST00000417833 LINC01561Q8N1V8 128 aa8.63□□□□□ -1.03
TGFBR3-203ENST00000417833 CHCHD10Q8WYQ3 142 aaPredicted RBP8.63□□□□□ -1.03
TGFBR3-203ENST00000417833 HIGD1BQ9P298 99 aa8.63□□□□□ -1.03
TGFBR3-203ENST00000417833 CDKN2A-AS1Q9UH64 79 aa8.63□□□□□ -1.03
TGFBR3-203ENST00000417833 GAGE12HA6NDE8 117 aa8.62□□□□□ -1.03
TGFBR3-203ENST00000417833 ZNF815PA8K554 130 aa8.62□□□□□ -1.03
TGFBR3-203ENST00000417833 COX6A2Q02221 97 aa8.62□□□□□ -1.03
TGFBR3-203ENST00000417833 UBR4Q5T4S7 5183 aa8.62□□□□□ -1.03
TGFBR3-203ENST00000417833 SPINK8P0C7L1 97 aa8.61□□□□□ -1.03
TGFBR3-203ENST00000417833 XGP55808 180 aa8.61□□□□□ -1.03
TGFBR3-203ENST00000417833 CTAG1AP78358 180 aa8.61□□□□□ -1.03
TGFBR3-203ENST00000417833 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
TGFBR3-203ENST00000417833 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
TGFBR3-203ENST00000417833 IGLV5-39A0A0G2JS06 123 aa8.6□□□□□ -1.03
TGFBR3-203ENST00000417833 FOXI1Q12951 378 aa8.6□□□□□ -1.03
TGFBR3-203ENST00000417833 Q6ZSA8 131 aa8.6□□□□□ -1.03
TGFBR3-203ENST00000417833 C2orf91Q6ZV80 131 aa8.6□□□□□ -1.03
TGFBR3-203ENST00000417833 A0A087WZ39 114 aa8.59□□□□□ -1.03
TGFBR3-203ENST00000417833 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
TGFBR3-203ENST00000417833 M0R143 59 aa8.59□□□□□ -1.03
TGFBR3-203ENST00000417833 CD164L2Q6UWJ8 174 aa8.59□□□□□ -1.03
TGFBR3-203ENST00000417833 C9orf163Q8N9P6 203 aa8.59□□□□□ -1.03
TGFBR3-203ENST00000417833 TTTY13Q9BZ97 58 aa8.59□□□□□ -1.03
TGFBR3-203ENST00000417833 SRRM2Q9UQ35 2752 aaKnown RBP8.59□□□□□ -1.03
TGFBR3-203ENST00000417833 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
TGFBR3-203ENST00000417833 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
TGFBR3-203ENST00000417833 CNBPP62633 177 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-203ENST00000417833 HSD52Q0P140 79 aa8.58□□□□□ -1.04
TGFBR3-203ENST00000417833 SCGB1D4Q6XE38 83 aa8.58□□□□□ -1.04
TGFBR3-203ENST00000417833 C15orf56Q8N910 161 aa8.58□□□□□ -1.04
TGFBR3-203ENST00000417833 XCL1P47992 114 aa8.57□□□□□ -1.04
TGFBR3-203ENST00000417833 TAL2Q16559 108 aa8.57□□□□□ -1.04
TGFBR3-203ENST00000417833 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
TGFBR3-203ENST00000417833 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
TGFBR3-203ENST00000417833 GVQW2A0A096LPI5 108 aaPredicted RBP8.56□□□□□ -1.04
TGFBR3-203ENST00000417833 COX7A2LO14548 114 aa8.56□□□□□ -1.04
TGFBR3-203ENST00000417833 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
TGFBR3-203ENST00000417833 FAM30AQ9NZY2 134 aa8.56□□□□□ -1.04
TGFBR3-203ENST00000417833 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
TGFBR3-203ENST00000417833 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.55□□□□□ -1.04
TGFBR3-203ENST00000417833 NDUFA1O15239 70 aa8.55□□□□□ -1.04
TGFBR3-203ENST00000417833 SLPIP03973 132 aa8.55□□□□□ -1.04
TGFBR3-203ENST00000417833 LINC01620Q4KN68 170 aa8.55□□□□□ -1.04
TGFBR3-203ENST00000417833 C5orf38Q86SI9 138 aa8.55□□□□□ -1.04
TGFBR3-203ENST00000417833 APOMO95445 188 aa8.54□□□□□ -1.04
TGFBR3-203ENST00000417833 HERV-K104P63124 156 aa8.54□□□□□ -1.04
TGFBR3-203ENST00000417833 COX7B2Q8TF08 81 aa8.54□□□□□ -1.04
TGFBR3-203ENST00000417833 SNHG12Q9BXW3 62 aa8.54□□□□□ -1.04
TGFBR3-203ENST00000417833 SPANXB1Q9NS25 103 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-203ENST00000417833 TMEM238C9JI98 176 aa8.53□□□□□ -1.04
TGFBR3-203ENST00000417833 TIMM17BO60830 172 aa8.53□□□□□ -1.04
TGFBR3-203ENST00000417833 MALP21145 153 aa8.53□□□□□ -1.04
TGFBR3-203ENST00000417833 HINT1P49773 126 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-203ENST00000417833 SDIM1Q6ZPB5 146 aa8.53□□□□□ -1.04
TGFBR3-203ENST00000417833 MYCBP2O75592 4640 aa8.53□□□□□ -1.04
TGFBR3-203ENST00000417833 PRSS2P07478 247 aa8.52□□□□□ -1.05
TGFBR3-203ENST00000417833 CIRBPQ14011 172 aaKnown RBP8.52□□□□□ -1.05
TGFBR3-203ENST00000417833 BVES-AS1Q5T3Y7 98 aa8.52□□□□□ -1.05
TGFBR3-203ENST00000417833 Q8IZM0 81 aa8.52□□□□□ -1.05
TGFBR3-203ENST00000417833 HIST1H4GQ99525 98 aa8.52□□□□□ -1.05
TGFBR3-203ENST00000417833 A0A0J9YXY3 114 aa8.51□□□□□ -1.05
TGFBR3-203ENST00000417833 CXCL5P42830 114 aa8.51□□□□□ -1.05
TGFBR3-203ENST00000417833 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
TGFBR3-203ENST00000417833 BATFQ16520 125 aa8.51□□□□□ -1.05
TGFBR3-203ENST00000417833 HIGD2BQ4VC39 106 aa8.51□□□□□ -1.05
TGFBR3-203ENST00000417833 Q6ZVH6 145 aa8.51□□□□□ -1.05
TGFBR3-203ENST00000417833 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
TGFBR3-203ENST00000417833 TOMM7Q9P0U1 55 aa8.51□□□□□ -1.05
TGFBR3-203ENST00000417833 COL5A1-AS1Q5SY13 56 aa8.5□□□□□ -1.05
TGFBR3-203ENST00000417833 CEND1Q8N111 149 aa8.5□□□□□ -1.05
TGFBR3-203ENST00000417833 ZNF625Q96I27 306 aaPredicted RBP8.5□□□□□ -1.05
TGFBR3-203ENST00000417833 A6NDN8 102 aa8.49□□□□□ -1.05
TGFBR3-203ENST00000417833 EPM2AB3EWF7 344 aa8.49□□□□□ -1.05
TGFBR3-203ENST00000417833 INAFM2P0DMQ5 153 aa8.49□□□□□ -1.05
TGFBR3-203ENST00000417833 C6orf226Q5I0X4 101 aa8.49□□□□□ -1.05
TGFBR3-203ENST00000417833 DNAH8Q96JB1 4490 aa8.49□□□□□ -1.05
TGFBR3-203ENST00000417833 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
TGFBR3-203ENST00000417833 A6NJY4 79 aa8.48□□□□□ -1.05
TGFBR3-203ENST00000417833 ZNF561-AS1K7EIQ3 104 aa8.48□□□□□ -1.05
TGFBR3-203ENST00000417833 SCXQ7RTU7 201 aa8.48□□□□□ -1.05
TGFBR3-203ENST00000417833 COPS9Q8WXC6 57 aa8.48□□□□□ -1.05
TGFBR3-203ENST00000417833 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
TGFBR3-203ENST00000417833 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
TGFBR3-203ENST00000417833 F8WDY8 70 aa8.47□□□□□ -1.05
TGFBR3-203ENST00000417833 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
TGFBR3-203ENST00000417833 HAMPP81172 84 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms