RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 C9orf116Q5BN46 136 aaPredicted RBP11.14□□□□□ -0.63
PHRF1-203ENST00000416188 HRCT1Q6UXD1 115 aa11.14□□□□□ -0.63
PHRF1-203ENST00000416188 C3orf22Q8N5N4 141 aa11.14□□□□□ -0.63
PHRF1-203ENST00000416188 IGLV4-60A0A075B6I1 120 aa11.13□□□□□ -0.63
PHRF1-203ENST00000416188 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
PHRF1-203ENST00000416188 CCDC179H3BU77 68 aa11.12□□□□□ -0.63
PHRF1-203ENST00000416188 HELZ2Q9BYK8 2649 aaKnown RBP11.12□□□□□ -0.63
PHRF1-203ENST00000416188 IGLV5-52A0A0A0MRZ9 124 aa11.12□□□□□ -0.63
PHRF1-203ENST00000416188 COX6A2Q02221 97 aa11.12□□□□□ -0.63
PHRF1-203ENST00000416188 TSPEAR-AS2P59090 65 aa11.11□□□□□ -0.63
PHRF1-203ENST00000416188 BEAN1Q3B7T3 259 aa11.11□□□□□ -0.63
PHRF1-203ENST00000416188 A0A096LNJ9 63 aa11.11□□□□□ -0.63
PHRF1-203ENST00000416188 LINC00474Q9P2X8 69 aa11.1□□□□□ -0.63
PHRF1-203ENST00000416188 SPTSSBQ8NFR3 76 aa11.09□□□□□ -0.63
PHRF1-203ENST00000416188 SNURFQ9Y675 71 aa11.09□□□□□ -0.63
PHRF1-203ENST00000416188 IGLV9-49A0A0B4J1Y8 123 aa11.09□□□□□ -0.63
PHRF1-203ENST00000416188 FSHBP01225 129 aa11.09□□□□□ -0.63
PHRF1-203ENST00000416188 FHL2Q14192 279 aa11.09□□□□□ -0.63
PHRF1-203ENST00000416188 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
PHRF1-203ENST00000416188 FAM19A3Q7Z5A8 133 aa11.09□□□□□ -0.63
PHRF1-203ENST00000416188 TET2Q6N021 2002 aaPredicted RBP11.09□□□□□ -0.63
PHRF1-203ENST00000416188 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
PHRF1-203ENST00000416188 COX8CQ7Z4L0 72 aa11.09□□□□□ -0.63
PHRF1-203ENST00000416188 PLAC8L1A1L4L8 177 aa11.08□□□□□ -0.64
PHRF1-203ENST00000416188 SERP2Q8N6R1 65 aa11.08□□□□□ -0.64
PHRF1-203ENST00000416188 SBSPONQ8IVN8 264 aa11.08□□□□□ -0.64
PHRF1-203ENST00000416188 SVIPQ8NHG7 77 aa11.07□□□□□ -0.64
PHRF1-203ENST00000416188 MUC7Q8TAX7 377 aa11.07□□□□□ -0.64
PHRF1-203ENST00000416188 EGFEM1PQ0D2K5 195 aa11.07□□□□□ -0.64
PHRF1-203ENST00000416188 IMUPQ9GZP8 106 aa11.07□□□□□ -0.64
PHRF1-203ENST00000416188 NTM-AS1Q6ZSK4 140 aa11.07□□□□□ -0.64
PHRF1-203ENST00000416188 Q6ZSN1 163 aa11.07□□□□□ -0.64
PHRF1-203ENST00000416188 PRR4Q16378 134 aa11.07□□□□□ -0.64
PHRF1-203ENST00000416188 ZNF706Q9Y5V0 76 aaPredicted RBP11.07□□□□□ -0.64
PHRF1-203ENST00000416188 PCSK5Q92824 1860 aa11.06□□□□□ -0.64
PHRF1-203ENST00000416188 TRBV10-3A0A0K0K1G6 114 aa11.06□□□□□ -0.64
PHRF1-203ENST00000416188 ADAMTSL4-AS1Q5T5F5 129 aa11.06□□□□□ -0.64
PHRF1-203ENST00000416188 AGRNO00468 2067 aa11.05□□□□□ -0.64
PHRF1-203ENST00000416188 MUC4Q99102 2169 aa11.05□□□□□ -0.64
PHRF1-203ENST00000416188 C6orf223Q8N319 242 aa11.05□□□□□ -0.64
PHRF1-203ENST00000416188 MDFIQ99750 246 aa11.05□□□□□ -0.64
PHRF1-203ENST00000416188 AMELXQ99217 191 aa11.04□□□□□ -0.64
PHRF1-203ENST00000416188 M0QXV9 152 aa11.03□□□□□ -0.64
PHRF1-203ENST00000416188 MGAM2Q2M2H8 2515 aa11.03□□□□□ -0.64
PHRF1-203ENST00000416188 CSDC2Q9Y534 153 aaKnown RBP11.02□□□□□ -0.64
PHRF1-203ENST00000416188 WWC2-AS2Q96NR7 200 aa11.02□□□□□ -0.64
PHRF1-203ENST00000416188 CELA1Q9UNI1 258 aa11.02□□□□□ -0.64
PHRF1-203ENST00000416188 RPL28P46779 137 aaKnown RBP11.02□□□□□ -0.65
PHRF1-203ENST00000416188 LYPD5Q6UWN5 251 aa11.02□□□□□ -0.65
PHRF1-203ENST00000416188 SPATA3Q8NHX4 192 aa11.02□□□□□ -0.65
PHRF1-203ENST00000416188 PRRC2CQ9Y520 2896 aaKnown RBP11.02□□□□□ -0.65
PHRF1-203ENST00000416188 Q8N814 137 aa11.01□□□□□ -0.65
PHRF1-203ENST00000416188 A0A087WYN8 130 aa11□□□□□ -0.65
PHRF1-203ENST00000416188 NDUFC2-KCTD14E9PQ53 114 aa11□□□□□ -0.65
PHRF1-203ENST00000416188 COX7CP15954 63 aa11□□□□□ -0.65
PHRF1-203ENST00000416188 Q6JHZ5 121 aa10.99□□□□□ -0.65
PHRF1-203ENST00000416188 FAM30AQ9NZY2 134 aa10.98□□□□□ -0.65
PHRF1-203ENST00000416188 NDUFC1O43677 76 aa10.98□□□□□ -0.65
PHRF1-203ENST00000416188 C1orf137Q5JT78 98 aa10.98□□□□□ -0.65
PHRF1-203ENST00000416188 Q8N9L7 120 aa10.97□□□□□ -0.65
PHRF1-203ENST00000416188 CHD7Q9P2D1 2997 aa10.97□□□□□ -0.65
PHRF1-203ENST00000416188 C10orf25Q5T742 122 aa10.96□□□□□ -0.65
PHRF1-203ENST00000416188 FAM240AA0A1B0GVK7 77 aa10.96□□□□□ -0.66
PHRF1-203ENST00000416188 A0A087WVE0 104 aa10.96□□□□□ -0.66
PHRF1-203ENST00000416188 A0A096LNT2 108 aa10.96□□□□□ -0.66
PHRF1-203ENST00000416188 A0A1B0GUV1 79 aa10.95□□□□□ -0.66
PHRF1-203ENST00000416188 RANBP2P49792 3224 aaKnown RBP10.95□□□□□ -0.66
PHRF1-203ENST00000416188 REG3GQ6UW15 175 aa10.94□□□□□ -0.66
PHRF1-203ENST00000416188 A0A0U1RQV1 116 aa10.93□□□□□ -0.66
PHRF1-203ENST00000416188 Q6Q795 121 aa10.93□□□□□ -0.66
PHRF1-203ENST00000416188 KIF25-AS1Q9Y6Z4 181 aa10.93□□□□□ -0.66
PHRF1-203ENST00000416188 PCNTO95613 3336 aa10.92□□□□□ -0.66
PHRF1-203ENST00000416188 ATP5EP56381 51 aaPredicted RBP10.91□□□□□ -0.66
PHRF1-203ENST00000416188 A8MTW9 85 aa10.91□□□□□ -0.66
PHRF1-203ENST00000416188 MAST4O15021 2626 aa10.9□□□□□ -0.66
PHRF1-203ENST00000416188 USP24Q9UPU5 2620 aa10.9□□□□□ -0.67
PHRF1-203ENST00000416188 CIRBP-AS1Q8TBR5 109 aa10.9□□□□□ -0.67
PHRF1-203ENST00000416188 CFAP46Q8IYW2 2715 aa10.89□□□□□ -0.67
PHRF1-203ENST00000416188 MRPL55Q7Z7F7 128 aaKnown RBP10.89□□□□□ -0.67
PHRF1-203ENST00000416188 K7ERS5 55 aa10.88□□□□□ -0.67
PHRF1-203ENST00000416188 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
PHRF1-203ENST00000416188 V9GYY9 64 aa10.88□□□□□ -0.67
PHRF1-203ENST00000416188 ESRGQ1W209 222 aa10.88□□□□□ -0.67
PHRF1-203ENST00000416188 LINC00208Q96KT6 92 aa10.88□□□□□ -0.67
PHRF1-203ENST00000416188 Q6ZRU5 148 aa10.87□□□□□ -0.67
PHRF1-203ENST00000416188 X6R8D5 127 aa10.87□□□□□ -0.67
PHRF1-203ENST00000416188 KRTAP1-3Q8IUG1 177 aa10.87□□□□□ -0.67
PHRF1-203ENST00000416188 LINC00337Q8N6G1 96 aa10.87□□□□□ -0.67
PHRF1-203ENST00000416188 C2orf48Q96LS8 159 aa10.87□□□□□ -0.67
PHRF1-203ENST00000416188 COL27A1Q8IZC6 1860 aaPredicted RBP10.87□□□□□ -0.67
PHRF1-203ENST00000416188 LINC01556Q5JQF7 62 aa10.86□□□□□ -0.67
PHRF1-203ENST00000416188 PRR15LQ9BU68 103 aa10.86□□□□□ -0.67
PHRF1-203ENST00000416188 TRAV7A0A075B6U4 112 aa10.86□□□□□ -0.67
PHRF1-203ENST00000416188 A6NED7 52 aa10.86□□□□□ -0.67
PHRF1-203ENST00000416188 K7EIL1 84 aa10.86□□□□□ -0.67
PHRF1-203ENST00000416188 LINC00575Q6W349 94 aa10.86□□□□□ -0.67
PHRF1-203ENST00000416188 Q8N3U1 123 aa10.85□□□□□ -0.67
PHRF1-203ENST00000416188 Q9BRP9 147 aa10.85□□□□□ -0.67
PHRF1-203ENST00000416188 A0A087WSZ3 146 aa10.85□□□□□ -0.67
PHRF1-203ENST00000416188 CDIP1Q9H305 208 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms