RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 C9orf116Q5BN46 136 aaPredicted RBP8.2□□□□□ -1.1
CTHRC1-202ENST00000415886 Q6ZRP5 223 aa8.2□□□□□ -1.1
CTHRC1-202ENST00000415886 TRAPPC1Q9Y5R8 145 aa8.2□□□□□ -1.1
CTHRC1-202ENST00000415886 SCO1O75880 301 aa8.19□□□□□ -1.1
CTHRC1-202ENST00000415886 GAGE2EQ4V326 116 aa8.19□□□□□ -1.1
CTHRC1-202ENST00000415886 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
CTHRC1-202ENST00000415886 GAGE2DQ9UEU5 116 aa8.19□□□□□ -1.1
CTHRC1-202ENST00000415886 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
CTHRC1-202ENST00000415886 A0A1W2PNN7 141 aa8.18□□□□□ -1.1
CTHRC1-202ENST00000415886 LINC00173Q6ZV60 143 aa8.18□□□□□ -1.1
CTHRC1-202ENST00000415886 C6orf48Q9UBA6 75 aa8.18□□□□□ -1.1
CTHRC1-202ENST00000415886 SRSF9Q13242 221 aaKnown RBP eCLIP8.17□□□□□ -1.1
CTHRC1-202ENST00000415886 KIAA0087Q14695 138 aa8.17□□□□□ -1.1
CTHRC1-202ENST00000415886 C2orf82Q6UX34 121 aa8.17□□□□□ -1.1
CTHRC1-202ENST00000415886 FAM19A3Q7Z5A8 133 aa8.17□□□□□ -1.1
CTHRC1-202ENST00000415886 YPEL4Q96NS1 127 aa8.17□□□□□ -1.1
CTHRC1-202ENST00000415886 LINC01546A6NGU7 62 aa8.16□□□□□ -1.1
CTHRC1-202ENST00000415886 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
CTHRC1-202ENST00000415886 NDUFA6P56556 154 aa8.16□□□□□ -1.1
CTHRC1-202ENST00000415886 LINC00469Q8N7U9 141 aa8.16□□□□□ -1.1
CTHRC1-202ENST00000415886 LINC00614P0C842 121 aa8.15□□□□□ -1.1
CTHRC1-202ENST00000415886 RAB5BP61020 215 aa8.15□□□□□ -1.1
CTHRC1-202ENST00000415886 PMVKQ15126 192 aa8.15□□□□□ -1.1
CTHRC1-202ENST00000415886 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
CTHRC1-202ENST00000415886 PHF5AQ7RTV0 110 aaKnown RBP8.14□□□□□ -1.11
CTHRC1-202ENST00000415886 Q8IZM0 81 aa8.14□□□□□ -1.11
CTHRC1-202ENST00000415886 CST9LQ9H4G1 147 aa8.14□□□□□ -1.11
CTHRC1-202ENST00000415886 TINCRA0A1B0GVN0 87 aa8.13□□□□□ -1.11
CTHRC1-202ENST00000415886 COLCA2A8K830 154 aa8.13□□□□□ -1.11
CTHRC1-202ENST00000415886 NDUFC2-KCTD14E9PQ53 114 aa8.13□□□□□ -1.11
CTHRC1-202ENST00000415886 LPAP08519 4548 aa8.12□□□□□ -1.11
CTHRC1-202ENST00000415886 H3BRM9 83 aa8.12□□□□□ -1.11
CTHRC1-202ENST00000415886 CXCL5P42830 114 aa8.12□□□□□ -1.11
CTHRC1-202ENST00000415886 C1orf137Q5JT78 98 aa8.12□□□□□ -1.11
CTHRC1-202ENST00000415886 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
CTHRC1-202ENST00000415886 F8VRH5 84 aa8.11□□□□□ -1.11
CTHRC1-202ENST00000415886 PDZD11Q5EBL8 140 aa8.11□□□□□ -1.11
CTHRC1-202ENST00000415886 C18orf32Q8TCD1 76 aa8.11□□□□□ -1.11
CTHRC1-202ENST00000415886 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
CTHRC1-202ENST00000415886 HBDP02042 147 aa8.1□□□□□ -1.11
CTHRC1-202ENST00000415886 UBE2BP63146 152 aa8.1□□□□□ -1.11
CTHRC1-202ENST00000415886 COX7B2Q8TF08 81 aa8.1□□□□□ -1.11
CTHRC1-202ENST00000415886 PSORS1C2Q9UIG4 136 aa8.1□□□□□ -1.11
CTHRC1-202ENST00000415886 ATP5LO75964 103 aa8.09□□□□□ -1.11
CTHRC1-202ENST00000415886 SPINK8P0C7L1 97 aa8.09□□□□□ -1.11
CTHRC1-202ENST00000415886 SMIM1B2RUZ4 78 aa8.08□□□□□ -1.12
CTHRC1-202ENST00000415886 M0QXV9 152 aa8.08□□□□□ -1.12
CTHRC1-202ENST00000415886 PMCHL1Q16048 86 aa8.08□□□□□ -1.12
CTHRC1-202ENST00000415886 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
CTHRC1-202ENST00000415886 LBHQ53QV2 105 aaPredicted RBP8.07□□□□□ -1.12
CTHRC1-202ENST00000415886 KRTAP9-2Q9BYQ4 174 aa8.07□□□□□ -1.12
CTHRC1-202ENST00000415886 XAGE1AQ9HD64 81 aa8.07□□□□□ -1.12
CTHRC1-202ENST00000415886 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
CTHRC1-202ENST00000415886 BAGE3Q86Y29 109 aa8.06□□□□□ -1.12
CTHRC1-202ENST00000415886 CHCHD1Q96BP2 118 aaKnown RBP8.05□□□□□ -1.12
CTHRC1-202ENST00000415886 URB1-AS1Q96HZ7 61 aa8.05□□□□□ -1.12
CTHRC1-202ENST00000415886 TRGC2P03986 189 aa8.04□□□□□ -1.12
CTHRC1-202ENST00000415886 IGLV7-43P04211 117 aa8.04□□□□□ -1.12
CTHRC1-202ENST00000415886 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
CTHRC1-202ENST00000415886 TMEM170BQ5T4T1 132 aa8.04□□□□□ -1.12
CTHRC1-202ENST00000415886 DIRC1Q969H9 104 aa8.04□□□□□ -1.12
CTHRC1-202ENST00000415886 A0A096LNJ9 63 aa8.03□□□□□ -1.12
CTHRC1-202ENST00000415886 PRR26Q8N8Z3 221 aa8.03□□□□□ -1.12
CTHRC1-202ENST00000415886 C22orf24Q9Y442 160 aa8.03□□□□□ -1.12
CTHRC1-202ENST00000415886 CHTOPQ9Y3Y2 248 aaKnown RBP8.02□□□□□ -1.13
CTHRC1-202ENST00000415886 HSBP1O75506 76 aa8.01□□□□□ -1.13
CTHRC1-202ENST00000415886 KRTAP7-1Q8IUC3 87 aa8.01□□□□□ -1.13
CTHRC1-202ENST00000415886 ZNF22P17026 224 aaPredicted RBP8□□□□□ -1.13
CTHRC1-202ENST00000415886 PFN2P35080 140 aa8□□□□□ -1.13
CTHRC1-202ENST00000415886 MRPL55Q7Z7F7 128 aaKnown RBP8□□□□□ -1.13
CTHRC1-202ENST00000415886 KRTAP11-1Q8IUC1 163 aa7.99□□□□□ -1.13
CTHRC1-202ENST00000415886 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
CTHRC1-202ENST00000415886 IFI27L1Q96BM0 104 aa7.99□□□□□ -1.13
CTHRC1-202ENST00000415886 IGLV5-39A0A0G2JS06 123 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 C11orf86A6NJI1 115 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 NUPR1O60356 82 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST1H2BKO60814 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST1H2BJP06899 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST1H2BOP23527 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST1H2BBP33778 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST1H2BDP58876 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST1H2BCP62807 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST2H2BEQ16778 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 SFTA2Q6UW10 78 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST1H2BHQ93079 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST1H2BNQ99877 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 HIST1H2BMQ99879 126 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 TP73-AS1Q9UF72 201 aa7.98□□□□□ -1.13
CTHRC1-202ENST00000415886 TRAV12-1A0A0B4J245 112 aa7.97□□□□□ -1.13
CTHRC1-202ENST00000415886 H0Y9J4 135 aa7.97□□□□□ -1.13
CTHRC1-202ENST00000415886 COX17Q14061 63 aa7.97□□□□□ -1.13
CTHRC1-202ENST00000415886 FAM19A2Q8N3H0 131 aa7.97□□□□□ -1.13
CTHRC1-202ENST00000415886 ZNF625Q96I27 306 aaPredicted RBP7.97□□□□□ -1.13
CTHRC1-202ENST00000415886 ERG28Q9UKR5 140 aa7.97□□□□□ -1.13
CTHRC1-202ENST00000415886 GAGE10A6NGK3 116 aa7.96□□□□□ -1.14
CTHRC1-202ENST00000415886 PRR4Q16378 134 aa7.96□□□□□ -1.14
CTHRC1-202ENST00000415886 A0A0U1RQV1 116 aa7.95□□□□□ -1.14
CTHRC1-202ENST00000415886 RPL37AP8A6NKH3 93 aa7.95□□□□□ -1.14
CTHRC1-202ENST00000415886 H0Y8G0 127 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms