RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 Q6ZSA8 131 aa13.44□□□□□ -0.26
PTPRU-203ENST00000415600 FAM30AQ9NZY2 134 aa13.44□□□□□ -0.26
PTPRU-203ENST00000415600 BATFQ16520 125 aa13.43□□□□□ -0.26
PTPRU-203ENST00000415600 FAT1Q14517 4588 aa13.42□□□□□ -0.26
PTPRU-203ENST00000415600 MYMXA0A1B0GTQ4 84 aa13.42□□□□□ -0.26
PTPRU-203ENST00000415600 IGLV5-45A0A087WSX0 123 aa13.41□□□□□ -0.26
PTPRU-203ENST00000415600 LEPROTO15243 131 aa13.41□□□□□ -0.26
PTPRU-203ENST00000415600 SEC11AP67812 179 aa13.41□□□□□ -0.26
PTPRU-203ENST00000415600 ENHOQ6UWT2 76 aa13.41□□□□□ -0.26
PTPRU-203ENST00000415600 GEMIN7Q9H840 131 aaKnown RBP13.41□□□□□ -0.26
PTPRU-203ENST00000415600 SRRM2Q9UQ35 2752 aaKnown RBP13.4□□□□□ -0.26
PTPRU-203ENST00000415600 VPS13BQ7Z7G8 4022 aa13.4□□□□□ -0.26
PTPRU-203ENST00000415600 HSD52Q0P140 79 aa13.4□□□□□ -0.26
PTPRU-203ENST00000415600 BVES-AS1Q5T3Y7 98 aa13.4□□□□□ -0.26
PTPRU-203ENST00000415600 HERVK_113P63121 156 aa13.39□□□□□ -0.27
PTPRU-203ENST00000415600 ZNF815PA8K554 130 aa13.38□□□□□ -0.27
PTPRU-203ENST00000415600 COL5A1-AS1Q5SY13 56 aa13.38□□□□□ -0.27
PTPRU-203ENST00000415600 LINC00242Q5T6M2 205 aa13.38□□□□□ -0.27
PTPRU-203ENST00000415600 PLEKHB2Q96CS7 222 aa13.38□□□□□ -0.27
PTPRU-203ENST00000415600 FLG2Q5D862 2391 aaPredicted RBP13.38□□□□□ -0.27
PTPRU-203ENST00000415600 IGLV4-60A0A075B6I1 120 aa13.37□□□□□ -0.27
PTPRU-203ENST00000415600 A0A1B0GUV1 79 aa13.37□□□□□ -0.27
PTPRU-203ENST00000415600 J3QQQ9 107 aa13.37□□□□□ -0.27
PTPRU-203ENST00000415600 TSPEAR-AS2P59090 65 aa13.37□□□□□ -0.27
PTPRU-203ENST00000415600 RBX1P62877 108 aa13.37□□□□□ -0.27
PTPRU-203ENST00000415600 LINC00528Q8N1L1 170 aa13.37□□□□□ -0.27
PTPRU-203ENST00000415600 LINC00469Q8N7U9 141 aa13.37□□□□□ -0.27
PTPRU-203ENST00000415600 LGALS3P17931 250 aaKnown RBP13.37□□□□□ -0.27
PTPRU-203ENST00000415600 TRAV13-1A0A0B4J241 112 aa13.36□□□□□ -0.27
PTPRU-203ENST00000415600 H3BRM9 83 aa13.36□□□□□ -0.27
PTPRU-203ENST00000415600 PRR34Q9NV39 138 aa13.36□□□□□ -0.27
PTPRU-203ENST00000415600 IGHV1-58A0A0C4DH39 117 aa13.35□□□□□ -0.27
PTPRU-203ENST00000415600 COX6A2Q02221 97 aa13.35□□□□□ -0.27
PTPRU-203ENST00000415600 LINC01620Q4KN68 170 aa13.35□□□□□ -0.27
PTPRU-203ENST00000415600 LINC00269Q8N2A0 174 aa13.35□□□□□ -0.27
PTPRU-203ENST00000415600 CDKN2A-AS1Q9UH64 79 aa13.35□□□□□ -0.27
PTPRU-203ENST00000415600 USP17L23D6RBM5 183 aa13.34□□□□□ -0.27
PTPRU-203ENST00000415600 TAL2Q16559 108 aa13.34□□□□□ -0.27
PTPRU-203ENST00000415600 SCXQ7RTU7 201 aa13.34□□□□□ -0.27
PTPRU-203ENST00000415600 IGHV3-64A0A075B6Q5 118 aa13.33□□□□□ -0.28
PTPRU-203ENST00000415600 TRAV8-4A0A0B4J246 113 aa13.32□□□□□ -0.28
PTPRU-203ENST00000415600 CLPSL2Q6UWE3 100 aa13.32□□□□□ -0.28
PTPRU-203ENST00000415600 ORAOV1Q8WV07 137 aa13.32□□□□□ -0.28
PTPRU-203ENST00000415600 J3QL48 77 aa13.32□□□□□ -0.28
PTPRU-203ENST00000415600 SPINK8P0C7L1 97 aa13.32□□□□□ -0.28
PTPRU-203ENST00000415600 REG3AQ06141 175 aa13.32□□□□□ -0.28
PTPRU-203ENST00000415600 DNAH8Q96JB1 4490 aa13.31□□□□□ -0.28
PTPRU-203ENST00000415600 SCGB1D4Q6XE38 83 aa13.31□□□□□ -0.28
PTPRU-203ENST00000415600 A0A1B0GV90 55 aa13.3□□□□□ -0.28
PTPRU-203ENST00000415600 IGLV5-39A0A0G2JS06 123 aa13.28□□□□□ -0.28
PTPRU-203ENST00000415600 CEND1Q8N111 149 aa13.28□□□□□ -0.28
PTPRU-203ENST00000415600 CIRBP-AS1Q8TBR5 109 aa13.28□□□□□ -0.28
PTPRU-203ENST00000415600 LINC00959A0A1B0GUT2 108 aa13.27□□□□□ -0.29
PTPRU-203ENST00000415600 SMIM1B2RUZ4 78 aa13.27□□□□□ -0.29
PTPRU-203ENST00000415600 HIST1H4GQ99525 98 aa13.27□□□□□ -0.29
PTPRU-203ENST00000415600 MYCBP2O75592 4640 aa13.27□□□□□ -0.29
PTPRU-203ENST00000415600 IGLV10-54A0A075B6I4 117 aa13.26□□□□□ -0.29
PTPRU-203ENST00000415600 IGKV3OR2-268A0A0C4DH90 116 aa13.26□□□□□ -0.29
PTPRU-203ENST00000415600 CCL25O15444 150 aa13.26□□□□□ -0.29
PTPRU-203ENST00000415600 SPANXB1Q9NS25 103 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-203ENST00000415600 A6NDN8 102 aa13.25□□□□□ -0.29
PTPRU-203ENST00000415600 FXYD2P54710 66 aa13.24□□□□□ -0.29
PTPRU-203ENST00000415600 C9orf163Q8N9P6 203 aa13.24□□□□□ -0.29
PTPRU-203ENST00000415600 NDUFA12Q9UI09 145 aa13.24□□□□□ -0.29
PTPRU-203ENST00000415600 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.24□□□□□ -0.29
PTPRU-203ENST00000415600 IGHV3OR16-9A0A0B4J2B5 98 aa13.24□□□□□ -0.29
PTPRU-203ENST00000415600 SS18Q15532 418 aa13.24□□□□□ -0.29
PTPRU-203ENST00000415600 KRTAP26-1Q6PEX3 210 aa13.23□□□□□ -0.29
PTPRU-203ENST00000415600 HERC1Q15751 4861 aa13.22□□□□□ -0.29
PTPRU-203ENST00000415600 A0A0J9YXY3 114 aa13.22□□□□□ -0.29
PTPRU-203ENST00000415600 CFAP161Q6P656 301 aa13.22□□□□□ -0.29
PTPRU-203ENST00000415600 TAX1BP3O14907 124 aa13.21□□□□□ -0.29
PTPRU-203ENST00000415600 NDUFA1O15239 70 aa13.21□□□□□ -0.29
PTPRU-203ENST00000415600 SRSF9Q13242 221 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPRU-203ENST00000415600 A0A087WZ39 114 aa13.2□□□□□ -0.3
PTPRU-203ENST00000415600 PTTG1IPP53801 180 aa13.2□□□□□ -0.3
PTPRU-203ENST00000415600 CNBPP62633 177 aaKnown RBP13.2□□□□□ -0.3
PTPRU-203ENST00000415600 KRTAP29-1A8MX34 341 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-203ENST00000415600 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
PTPRU-203ENST00000415600 LINC01561Q8N1V8 128 aa13.18□□□□□ -0.3
PTPRU-203ENST00000415600 RPL37AP61513 92 aaKnown RBP13.17□□□□□ -0.3
PTPRU-203ENST00000415600 LITAFQ99732 161 aa13.16□□□□□ -0.3
PTPRU-203ENST00000415600 TIMM17BO60830 172 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 SMIM13P0DJ93 91 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 XCL1P47992 114 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 CD164L2Q6UWJ8 174 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 SDIM1Q6ZPB5 146 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 Q6ZVH6 145 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 DPH3Q96FX2 82 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 ZNF625Q96I27 306 aaPredicted RBP13.15□□□□□ -0.3
PTPRU-203ENST00000415600 TMEM238LA0A1B0GVL6 79 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 A6NJY4 79 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 COX7B2Q8TF08 81 aa13.15□□□□□ -0.3
PTPRU-203ENST00000415600 NHP2Q9NX24 153 aaKnown RBP13.15□□□□□ -0.3
PTPRU-203ENST00000415600 A0A1B0GWB2 263 aa13.14□□□□□ -0.31
PTPRU-203ENST00000415600 GAGE12HA6NDE8 117 aa13.14□□□□□ -0.31
PTPRU-203ENST00000415600 CHCHD10Q8WYQ3 142 aaPredicted RBP13.14□□□□□ -0.31
PTPRU-203ENST00000415600 SPANXDQ9BXN6 97 aa13.14□□□□□ -0.31
PTPRU-203ENST00000415600 SPANXCQ9NY87 97 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms