RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.59□□□□□ -0.07
AP1S3-205ENST00000415298 TENM1Q9UKZ4 2725 aa14.59□□□□□ -0.07
AP1S3-205ENST00000415298 LINC00308Q8TCZ7 52 aa14.59□□□□□ -0.07
AP1S3-205ENST00000415298 PHLDA3Q9Y5J5 127 aa14.58□□□□□ -0.07
AP1S3-205ENST00000415298 H3BUA1 57 aa14.58□□□□□ -0.08
AP1S3-205ENST00000415298 CTSGP08311 255 aa14.57□□□□□ -0.08
AP1S3-205ENST00000415298 CD28P10747 220 aa14.56□□□□□ -0.08
AP1S3-205ENST00000415298 MIFP14174 115 aa14.56□□□□□ -0.08
AP1S3-205ENST00000415298 C9orf47Q6ZRZ4 202 aa14.56□□□□□ -0.08
AP1S3-205ENST00000415298 IGHV3OR16-8A0A075B7F1 116 aa14.55□□□□□ -0.08
AP1S3-205ENST00000415298 CLPSL1A2RUU4 121 aa14.55□□□□□ -0.08
AP1S3-205ENST00000415298 PROK1P58294 105 aa14.55□□□□□ -0.08
AP1S3-205ENST00000415298 S100A4P26447 101 aaKnown RBP14.55□□□□□ -0.08
AP1S3-205ENST00000415298 KRTAP10-3P60369 221 aa14.55□□□□□ -0.08
AP1S3-205ENST00000415298 USMG5Q96IX5 58 aa14.55□□□□□ -0.08
AP1S3-205ENST00000415298 HOXD3P31249 432 aaPredicted RBP14.54□□□□□ -0.08
AP1S3-205ENST00000415298 KHDC1LQ5JSQ8 128 aa14.54□□□□□ -0.08
AP1S3-205ENST00000415298 ZNF625Q96I27 306 aaPredicted RBP14.54□□□□□ -0.08
AP1S3-205ENST00000415298 UBE2E2Q96LR5 201 aa14.54□□□□□ -0.08
AP1S3-205ENST00000415298 PIK3CD-AS1Q5SR53 167 aa14.53□□□□□ -0.08
AP1S3-205ENST00000415298 IGLV4-3A0A075B6K6 122 aa14.53□□□□□ -0.08
AP1S3-205ENST00000415298 DEFB136Q30KP8 78 aa14.53□□□□□ -0.08
AP1S3-205ENST00000415298 MRPL53Q96EL3 112 aaKnown RBP14.53□□□□□ -0.08
AP1S3-205ENST00000415298 A0A087WZ39 114 aa14.52□□□□□ -0.09
AP1S3-205ENST00000415298 NCR3O14931 201 aa14.52□□□□□ -0.09
AP1S3-205ENST00000415298 MED14OSP0DP75 135 aa14.52□□□□□ -0.09
AP1S3-205ENST00000415298 KRTAP24-1Q3LI83 254 aa14.52□□□□□ -0.09
AP1S3-205ENST00000415298 KTN1-AS1Q86SY8 53 aa14.52□□□□□ -0.09
AP1S3-205ENST00000415298 LINC00315P59091 139 aa14.51□□□□□ -0.09
AP1S3-205ENST00000415298 WNK1Q9H4A3 2382 aa14.51□□□□□ -0.09
AP1S3-205ENST00000415298 APOC4P55056 127 aa14.5□□□□□ -0.09
AP1S3-205ENST00000415298 KIF25-AS1Q9Y6Z4 181 aa14.5□□□□□ -0.09
AP1S3-205ENST00000415298 SUMO4Q6EEV6 95 aa14.49□□□□□ -0.09
AP1S3-205ENST00000415298 TRBV6-5A0A0K0K1A5 114 aa14.49□□□□□ -0.09
AP1S3-205ENST00000415298 NDUFA1O15239 70 aa14.48□□□□□ -0.09
AP1S3-205ENST00000415298 C20orf203Q8NBC4 194 aa14.48□□□□□ -0.09
AP1S3-205ENST00000415298 UBL5Q9BZL1 73 aa14.48□□□□□ -0.09
AP1S3-205ENST00000415298 UNQ9165/PRO28630Q6UXU0 137 aa14.47□□□□□ -0.09
AP1S3-205ENST00000415298 TRAV10A0A0B4J240 114 aa14.47□□□□□ -0.09
AP1S3-205ENST00000415298 C11orf68Q9H3H3 251 aaKnown RBP14.47□□□□□ -0.09
AP1S3-205ENST00000415298 TRBV7-4A0A0J9YYF1 115 aa14.46□□□□□ -0.09
AP1S3-205ENST00000415298 Q1T7F1 81 aa14.46□□□□□ -0.1
AP1S3-205ENST00000415298 A0A087WYN8 130 aa14.45□□□□□ -0.1
AP1S3-205ENST00000415298 COL6A5A8TX70 2615 aa14.45□□□□□ -0.1
AP1S3-205ENST00000415298 PF4P02776 101 aa14.45□□□□□ -0.1
AP1S3-205ENST00000415298 PRR9Q5T870 116 aa14.45□□□□□ -0.1
AP1S3-205ENST00000415298 DYNLRB2Q8TF09 96 aa14.45□□□□□ -0.1
AP1S3-205ENST00000415298 IGHV3OR16-13A0A075B7E8 117 aa14.44□□□□□ -0.1
AP1S3-205ENST00000415298 IGHV3-74A0A0B4J1X5 117 aa14.44□□□□□ -0.1
AP1S3-205ENST00000415298 C4orf3Q8WVX3 66 aa14.44□□□□□ -0.1
AP1S3-205ENST00000415298 IGHV3-49A0A0A0MS15 119 aa14.43□□□□□ -0.1
AP1S3-205ENST00000415298 RPL11P62913 178 aaKnown RBP14.43□□□□□ -0.1
AP1S3-205ENST00000415298 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.43□□□□□ -0.1
AP1S3-205ENST00000415298 MIR7-3HGQ8N6C7 128 aa14.43□□□□□ -0.1
AP1S3-205ENST00000415298 STAB1Q9NY15 2570 aa14.43□□□□□ -0.1
AP1S3-205ENST00000415298 SLURP1P55000 103 aa14.43□□□□□ -0.1
AP1S3-205ENST00000415298 H3BS24 57 aa14.42□□□□□ -0.1
AP1S3-205ENST00000415298 VWFP04275 2813 aa14.41□□□□□ -0.1
AP1S3-205ENST00000415298 TRRAPQ9Y4A5 3859 aa14.41□□□□□ -0.1
AP1S3-205ENST00000415298 TRAV21A0A0B4J279 112 aa14.41□□□□□ -0.1
AP1S3-205ENST00000415298 IGHV3-66A0A0C4DH42 116 aa14.41□□□□□ -0.1
AP1S3-205ENST00000415298 F5H697 171 aa14.41□□□□□ -0.1
AP1S3-205ENST00000415298 F6UB75 175 aa14.41□□□□□ -0.1
AP1S3-205ENST00000415298 H0YGX0 51 aa14.41□□□□□ -0.1
AP1S3-205ENST00000415298 LENEPQ9Y5L5 61 aa14.41□□□□□ -0.1
AP1S3-205ENST00000415298 NDUFA4O00483 81 aa14.39□□□□□ -0.11
AP1S3-205ENST00000415298 RNASE3P12724 160 aaKnown RBP14.38□□□□□ -0.11
AP1S3-205ENST00000415298 TMEM254Q8TBM7 123 aa14.38□□□□□ -0.11
AP1S3-205ENST00000415298 M0R378 163 aa14.38□□□□□ -0.11
AP1S3-205ENST00000415298 FUSP35637 526 aaKnown RBP eCLIP14.38□□□□□ -0.11
AP1S3-205ENST00000415298 ORMDL1Q9P0S3 153 aa14.38□□□□□ -0.11
AP1S3-205ENST00000415298 LINC00588Q9Y4M8 146 aa14.38□□□□□ -0.11
AP1S3-205ENST00000415298 JMJD7-PLA2G4BH0Y9G9 81 aa14.37□□□□□ -0.11
AP1S3-205ENST00000415298 CCL24O00175 119 aa14.37□□□□□ -0.11
AP1S3-205ENST00000415298 Q6ZTC4 211 aa14.37□□□□□ -0.11
AP1S3-205ENST00000415298 ERC2-IT1O76042 136 aa14.36□□□□□ -0.11
AP1S3-205ENST00000415298 Q6ZRP5 223 aa14.35□□□□□ -0.11
AP1S3-205ENST00000415298 C11orf72Q8NBR9 251 aa14.35□□□□□ -0.11
AP1S3-205ENST00000415298 FAM104AQ969W3 186 aa14.35□□□□□ -0.11
AP1S3-205ENST00000415298 IGKV2-29A2NJV5 120 aaPredicted RBP14.34□□□□□ -0.11
AP1S3-205ENST00000415298 LECT2O14960 151 aa14.34□□□□□ -0.11
AP1S3-205ENST00000415298 CRPP02741 224 aa14.34□□□□□ -0.11
AP1S3-205ENST00000415298 GNRH2O43555 120 aa14.34□□□□□ -0.11
AP1S3-205ENST00000415298 Q9H8V8 135 aa14.34□□□□□ -0.11
AP1S3-205ENST00000415298 A0A087WWL8 130 aa14.33□□□□□ -0.12
AP1S3-205ENST00000415298 ZFAND2AQ8N6M9 145 aa14.33□□□□□ -0.12
AP1S3-205ENST00000415298 LYRM9A8MSI8 78 aa14.32□□□□□ -0.12
AP1S3-205ENST00000415298 SPATA3Q8NHX4 192 aa14.32□□□□□ -0.12
AP1S3-205ENST00000415298 MUC4Q99102 2169 aa14.31□□□□□ -0.12
AP1S3-205ENST00000415298 NDUFS5O43920 106 aa14.31□□□□□ -0.12
AP1S3-205ENST00000415298 NOTCH3Q9UM47 2321 aa14.31□□□□□ -0.12
AP1S3-205ENST00000415298 RHPN1-AS1Q9BWJ2 59 aa14.31□□□□□ -0.12
AP1S3-205ENST00000415298 UBE2BP63146 152 aa14.3□□□□□ -0.12
AP1S3-205ENST00000415298 DGAT2L7PQ6IED9 249 aa14.3□□□□□ -0.12
AP1S3-205ENST00000415298 hDV103S1A0JD37 113 aa14.3□□□□□ -0.12
AP1S3-205ENST00000415298 PRYO14603 147 aa14.3□□□□□ -0.12
AP1S3-205ENST00000415298 Q6ZVQ6 151 aa14.3□□□□□ -0.12
AP1S3-205ENST00000415298 IGKV3-7A0A075B6H7 116 aa14.29□□□□□ -0.12
AP1S3-205ENST00000415298 M0QY20 66 aa14.29□□□□□ -0.12
AP1S3-205ENST00000415298 LINC01547P58512 204 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 402.9 ms