RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 PRB2P02812 416 aaPredicted RBP8.45□□□□□ -1.06
PTPRF-205ENST00000414879 UPK3BQ9BT76 320 aa8.45□□□□□ -1.06
PTPRF-205ENST00000414879 IMUPQ9GZP8 106 aa8.45□□□□□ -1.06
PTPRF-205ENST00000414879 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
PTPRF-205ENST00000414879 Q6ZSN1 163 aa8.44□□□□□ -1.06
PTPRF-205ENST00000414879 FAM236AA0A1B0GUQ0 79 aa8.44□□□□□ -1.06
PTPRF-205ENST00000414879 FAM236BA0A1B0GV22 79 aa8.44□□□□□ -1.06
PTPRF-205ENST00000414879 Q6ZQY7 126 aa8.44□□□□□ -1.06
PTPRF-205ENST00000414879 A8MTW9 85 aa8.43□□□□□ -1.06
PTPRF-205ENST00000414879 USP17L23D6RBM5 183 aa8.43□□□□□ -1.06
PTPRF-205ENST00000414879 H0Y9J4 135 aa8.43□□□□□ -1.06
PTPRF-205ENST00000414879 KRTAP24-1Q3LI83 254 aa8.43□□□□□ -1.06
PTPRF-205ENST00000414879 ANKRD17O75179 2603 aaKnown RBP8.42□□□□□ -1.06
PTPRF-205ENST00000414879 COX6A2Q02221 97 aa8.42□□□□□ -1.06
PTPRF-205ENST00000414879 IGLV5-39A0A0G2JS06 123 aa8.41□□□□□ -1.06
PTPRF-205ENST00000414879 TEX49A0A1B0GTD5 131 aa8.41□□□□□ -1.06
PTPRF-205ENST00000414879 PRYO14603 147 aa8.41□□□□□ -1.06
PTPRF-205ENST00000414879 CCKP06307 115 aa8.41□□□□□ -1.06
PTPRF-205ENST00000414879 IGKV2-28A0A075B6P5 120 aa8.41□□□□□ -1.06
PTPRF-205ENST00000414879 IGKV2D-28P01615 120 aa8.41□□□□□ -1.06
PTPRF-205ENST00000414879 PLAC8L1A1L4L8 177 aa8.41□□□□□ -1.06
PTPRF-205ENST00000414879 M0R2N4 97 aa8.4□□□□□ -1.06
PTPRF-205ENST00000414879 X6R8D5 127 aa8.4□□□□□ -1.06
PTPRF-205ENST00000414879 FAM240AA0A1B0GVK7 77 aa8.4□□□□□ -1.07
PTPRF-205ENST00000414879 M0QXV9 152 aa8.4□□□□□ -1.07
PTPRF-205ENST00000414879 C1orf134Q5TEV5 83 aa8.4□□□□□ -1.07
PTPRF-205ENST00000414879 LINC00526Q96FQ7 95 aa8.39□□□□□ -1.07
PTPRF-205ENST00000414879 IGLV5-45A0A087WSX0 123 aa8.39□□□□□ -1.07
PTPRF-205ENST00000414879 UNC80Q8N2C7 3258 aa8.39□□□□□ -1.07
PTPRF-205ENST00000414879 Q6JHZ5 121 aa8.38□□□□□ -1.07
PTPRF-205ENST00000414879 REG3GQ6UW15 175 aa8.38□□□□□ -1.07
PTPRF-205ENST00000414879 WFDC10BQ8IUB3 73 aa8.38□□□□□ -1.07
PTPRF-205ENST00000414879 SLPIP03973 132 aa8.38□□□□□ -1.07
PTPRF-205ENST00000414879 AGRNO00468 2067 aa8.38□□□□□ -1.07
PTPRF-205ENST00000414879 NDUFV3P56181 108 aaKnown RBP8.37□□□□□ -1.07
PTPRF-205ENST00000414879 IGHV3OR16-9A0A0B4J2B5 98 aa8.37□□□□□ -1.07
PTPRF-205ENST00000414879 TSPEAR-AS2P59090 65 aa8.37□□□□□ -1.07
PTPRF-205ENST00000414879 IGLV5-52A0A0A0MRZ9 124 aa8.36□□□□□ -1.07
PTPRF-205ENST00000414879 Q8N814 137 aa8.36□□□□□ -1.07
PTPRF-205ENST00000414879 TRBV10-3A0A0K0K1G6 114 aa8.36□□□□□ -1.07
PTPRF-205ENST00000414879 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
PTPRF-205ENST00000414879 CELA1Q9UNI1 258 aa8.35□□□□□ -1.07
PTPRF-205ENST00000414879 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
PTPRF-205ENST00000414879 CHKB-CPT1BH3BT56 60 aa8.34□□□□□ -1.07
PTPRF-205ENST00000414879 NTM-AS1Q6ZSK4 140 aa8.34□□□□□ -1.07
PTPRF-205ENST00000414879 Q8NAQ8 132 aa8.34□□□□□ -1.07
PTPRF-205ENST00000414879 MRPL55Q7Z7F7 128 aaKnown RBP8.33□□□□□ -1.08
PTPRF-205ENST00000414879 MTORP42345 2549 aa8.33□□□□□ -1.08
PTPRF-205ENST00000414879 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
PTPRF-205ENST00000414879 UQCRQO14949 82 aa8.33□□□□□ -1.08
PTPRF-205ENST00000414879 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
PTPRF-205ENST00000414879 NDUFC1O43677 76 aa8.31□□□□□ -1.08
PTPRF-205ENST00000414879 ESRGQ1W209 222 aa8.31□□□□□ -1.08
PTPRF-205ENST00000414879 TRBV7-6A0A0J9YX20 115 aa8.3□□□□□ -1.08
PTPRF-205ENST00000414879 FLNBO75369 2602 aaKnown RBP8.3□□□□□ -1.08
PTPRF-205ENST00000414879 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
PTPRF-205ENST00000414879 LRCOL1A6NCL2 159 aa8.3□□□□□ -1.08
PTPRF-205ENST00000414879 B5MCH6 92 aa8.3□□□□□ -1.08
PTPRF-205ENST00000414879 PPDPFQ9H3Y8 114 aa8.3□□□□□ -1.08
PTPRF-205ENST00000414879 A0A096LNI7 61 aa8.29□□□□□ -1.08
PTPRF-205ENST00000414879 Q6ZRU5 148 aa8.29□□□□□ -1.08
PTPRF-205ENST00000414879 SETD2Q9BYW2 2564 aaPredicted RBP8.29□□□□□ -1.08
PTPRF-205ENST00000414879 Q6Q795 121 aa8.29□□□□□ -1.08
PTPRF-205ENST00000414879 ENHOQ6UWT2 76 aa8.29□□□□□ -1.08
PTPRF-205ENST00000414879 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
PTPRF-205ENST00000414879 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
PTPRF-205ENST00000414879 SDIM1Q6ZPB5 146 aa8.28□□□□□ -1.08
PTPRF-205ENST00000414879 PRUNE2Q8WUY3 3088 aa8.28□□□□□ -1.08
PTPRF-205ENST00000414879 A0A1B0GW54 56 aa8.27□□□□□ -1.08
PTPRF-205ENST00000414879 IGKV4-1P06312 121 aa8.27□□□□□ -1.08
PTPRF-205ENST00000414879 LINC00575Q6W349 94 aa8.27□□□□□ -1.08
PTPRF-205ENST00000414879 MDFIQ99750 246 aa8.27□□□□□ -1.08
PTPRF-205ENST00000414879 C1orf137Q5JT78 98 aa8.27□□□□□ -1.09
PTPRF-205ENST00000414879 TRIOO75962 3097 aa8.27□□□□□ -1.09
PTPRF-205ENST00000414879 J3KT08 172 aa8.27□□□□□ -1.09
PTPRF-205ENST00000414879 CSNK1G2-AS1Q8NCQ2 148 aa8.26□□□□□ -1.09
PTPRF-205ENST00000414879 POLQO75417 2590 aa8.26□□□□□ -1.09
PTPRF-205ENST00000414879 MT-ATP8P03928 68 aa8.26□□□□□ -1.09
PTPRF-205ENST00000414879 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
PTPRF-205ENST00000414879 KRTAP1-3Q8IUG1 177 aa8.26□□□□□ -1.09
PTPRF-205ENST00000414879 C19orf73Q9NVV2 129 aa8.26□□□□□ -1.09
PTPRF-205ENST00000414879 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
PTPRF-205ENST00000414879 C3orf84H3BNL1 204 aa8.25□□□□□ -1.09
PTPRF-205ENST00000414879 SERP2Q8N6R1 65 aa8.24□□□□□ -1.09
PTPRF-205ENST00000414879 DNAH10OSP0CZ25 163 aa8.24□□□□□ -1.09
PTPRF-205ENST00000414879 DNAH14Q0VDD8 3507 aa8.24□□□□□ -1.09
PTPRF-205ENST00000414879 EYSQ5T1H1 3165 aa8.23□□□□□ -1.09
PTPRF-205ENST00000414879 ACANP16112 2415 aa8.23□□□□□ -1.09
PTPRF-205ENST00000414879 SPATA3Q8NHX4 192 aa8.23□□□□□ -1.09
PTPRF-205ENST00000414879 LINC00612Q8N6U2 182 aa8.22□□□□□ -1.09
PTPRF-205ENST00000414879 C22orf24Q9Y442 160 aa8.22□□□□□ -1.09
PTPRF-205ENST00000414879 SEC61GP60059 68 aa8.22□□□□□ -1.09
PTPRF-205ENST00000414879 C3orf22Q8N5N4 141 aa8.22□□□□□ -1.09
PTPRF-205ENST00000414879 MUC4Q99102 2169 aa8.22□□□□□ -1.09
PTPRF-205ENST00000414879 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
PTPRF-205ENST00000414879 LINC00337Q8N6G1 96 aa8.22□□□□□ -1.09
PTPRF-205ENST00000414879 F8P00451 2351 aa8.21□□□□□ -1.09
PTPRF-205ENST00000414879 A0A087WYN8 130 aa8.21□□□□□ -1.09
PTPRF-205ENST00000414879 NBDYA0A0U1RRE5 68 aa8.21□□□□□ -1.09
PTPRF-205ENST00000414879 WWC2-AS2Q96NR7 200 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms