RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 HIST1H2BJP06899 126 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 HIST1H2BOP23527 126 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 HIST1H2BBP33778 126 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 HIST1H2BDP58876 126 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 HIST1H2BCP62807 126 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 HIST2H2BEQ16778 126 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 C2orf82Q6UX34 121 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 HIST1H2BHQ93079 126 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 PACRGQ96M98 296 aaPredicted RBP12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 HIST1H2BNQ99877 126 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 HIST1H2BMQ99879 126 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 MAP1LC3AQ9H492 121 aa12.84□□□□□ -0.35
RHBDD3-204ENST00000414672 TRBV30A0A0K0K1B3 111 aa12.83□□□□□ -0.36
RHBDD3-204ENST00000414672 NDUFC2-KCTD14E9PQ53 114 aa12.83□□□□□ -0.36
RHBDD3-204ENST00000414672 KIAA0087Q14695 138 aa12.83□□□□□ -0.36
RHBDD3-204ENST00000414672 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.36
RHBDD3-204ENST00000414672 C9orf129Q5T035 196 aaKnown RBP12.82□□□□□ -0.36
RHBDD3-204ENST00000414672 LOC389332A0A1B0GUA5 103 aa12.81□□□□□ -0.36
RHBDD3-204ENST00000414672 ZNF861PO60384 105 aa12.81□□□□□ -0.36
RHBDD3-204ENST00000414672 IFI27P40305 119 aaPredicted RBP12.8□□□□□ -0.36
RHBDD3-204ENST00000414672 PRSS47A8MTI9 375 aa12.79□□□□□ -0.36
RHBDD3-204ENST00000414672 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
RHBDD3-204ENST00000414672 BAGE3Q86Y29 109 aa12.79□□□□□ -0.36
RHBDD3-204ENST00000414672 NXT2Q9NPJ8 142 aaKnown RBP12.79□□□□□ -0.36
RHBDD3-204ENST00000414672 TMA7Q9Y2S6 64 aaKnown RBP12.78□□□□□ -0.36
RHBDD3-204ENST00000414672 Q8N8P6 123 aa12.77□□□□□ -0.37
RHBDD3-204ENST00000414672 PRSS2P07478 247 aa12.76□□□□□ -0.37
RHBDD3-204ENST00000414672 NDUFA6P56556 154 aa12.76□□□□□ -0.37
RHBDD3-204ENST00000414672 FA2HQ7L5A8 372 aa12.76□□□□□ -0.37
RHBDD3-204ENST00000414672 LINC00469Q8N7U9 141 aa12.76□□□□□ -0.37
RHBDD3-204ENST00000414672 NUPR1O60356 82 aa12.75□□□□□ -0.37
RHBDD3-204ENST00000414672 S100A6P06703 90 aa12.75□□□□□ -0.37
RHBDD3-204ENST00000414672 LBHQ53QV2 105 aaPredicted RBP12.75□□□□□ -0.37
RHBDD3-204ENST00000414672 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
RHBDD3-204ENST00000414672 C22orf24Q9Y442 160 aa12.75□□□□□ -0.37
RHBDD3-204ENST00000414672 IGLV4-3A0A075B6K6 122 aa12.74□□□□□ -0.37
RHBDD3-204ENST00000414672 CKS1BP61024 79 aa12.74□□□□□ -0.37
RHBDD3-204ENST00000414672 TOMM7Q9P0U1 55 aa12.74□□□□□ -0.37
RHBDD3-204ENST00000414672 PYGO1Q9Y3Y4 419 aa12.74□□□□□ -0.37
RHBDD3-204ENST00000414672 LINC00614P0C842 121 aa12.73□□□□□ -0.37
RHBDD3-204ENST00000414672 TEX43Q6ZNM6 134 aa12.73□□□□□ -0.37
RHBDD3-204ENST00000414672 CHCHD1Q96BP2 118 aaKnown RBP12.73□□□□□ -0.37
RHBDD3-204ENST00000414672 K7EMI3 77 aa12.72□□□□□ -0.37
RHBDD3-204ENST00000414672 SERF1AO75920 110 aa12.72□□□□□ -0.37
RHBDD3-204ENST00000414672 COA6Q5JTJ3 125 aaKnown RBP12.72□□□□□ -0.37
RHBDD3-204ENST00000414672 XAGE1AQ9HD64 81 aa12.72□□□□□ -0.37
RHBDD3-204ENST00000414672 LINC01546A6NGU7 62 aa12.71□□□□□ -0.37
RHBDD3-204ENST00000414672 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
RHBDD3-204ENST00000414672 LINC01561Q8N1V8 128 aa12.71□□□□□ -0.37
RHBDD3-204ENST00000414672 TYMSOSQ8TAI1 123 aa12.71□□□□□ -0.37
RHBDD3-204ENST00000414672 URB1-AS1Q96HZ7 61 aa12.71□□□□□ -0.37
RHBDD3-204ENST00000414672 C2orf88Q9BSF0 95 aa12.71□□□□□ -0.37
RHBDD3-204ENST00000414672 A0A087X002 238 aa12.7□□□□□ -0.38
RHBDD3-204ENST00000414672 HSBP1O75506 76 aa12.7□□□□□ -0.38
RHBDD3-204ENST00000414672 CRYGAP11844 174 aa12.7□□□□□ -0.38
RHBDD3-204ENST00000414672 RPL28P46779 137 aaKnown RBP12.7□□□□□ -0.38
RHBDD3-204ENST00000414672 Q6ZN92 141 aa12.7□□□□□ -0.38
RHBDD3-204ENST00000414672 LINC00310P59036 64 aa12.69□□□□□ -0.38
RHBDD3-204ENST00000414672 ORMDL2Q53FV1 153 aa12.69□□□□□ -0.38
RHBDD3-204ENST00000414672 ZC2HC1BQ5TFG8 222 aa12.68□□□□□ -0.38
RHBDD3-204ENST00000414672 VCX2Q9H322 139 aa12.67□□□□□ -0.38
RHBDD3-204ENST00000414672 BCE1O60756 84 aa12.66□□□□□ -0.38
RHBDD3-204ENST00000414672 MRPL55Q7Z7F7 128 aaKnown RBP12.66□□□□□ -0.38
RHBDD3-204ENST00000414672 G0S2P27469 103 aa12.65□□□□□ -0.38
RHBDD3-204ENST00000414672 SNRPEP62304 92 aaKnown RBP12.65□□□□□ -0.38
RHBDD3-204ENST00000414672 LCE2AQ5TA79 106 aaPredicted RBP12.65□□□□□ -0.38
RHBDD3-204ENST00000414672 Q8IZM0 81 aa12.65□□□□□ -0.38
RHBDD3-204ENST00000414672 CYSLTR1Q9Y271 337 aa12.65□□□□□ -0.38
RHBDD3-204ENST00000414672 PMCHL1Q16048 86 aa12.64□□□□□ -0.39
RHBDD3-204ENST00000414672 C5orf52A6NGY3 159 aa12.63□□□□□ -0.39
RHBDD3-204ENST00000414672 HBDP02042 147 aa12.63□□□□□ -0.39
RHBDD3-204ENST00000414672 ANAPC11Q9NYG5 84 aa12.63□□□□□ -0.39
RHBDD3-204ENST00000414672 TP73-AS1Q9UF72 201 aa12.63□□□□□ -0.39
RHBDD3-204ENST00000414672 RPL37AP8A6NKH3 93 aa12.62□□□□□ -0.39
RHBDD3-204ENST00000414672 PDZD11Q5EBL8 140 aa12.62□□□□□ -0.39
RHBDD3-204ENST00000414672 C2orf66Q6UXQ4 117 aa12.62□□□□□ -0.39
RHBDD3-204ENST00000414672 FAM19A2Q8N3H0 131 aa12.62□□□□□ -0.39
RHBDD3-204ENST00000414672 RETNLBQ9BQ08 111 aa12.62□□□□□ -0.39
RHBDD3-204ENST00000414672 S100A2P29034 98 aa12.61□□□□□ -0.39
RHBDD3-204ENST00000414672 LINC00173Q6ZV60 143 aa12.61□□□□□ -0.39
RHBDD3-204ENST00000414672 HIST3H2BBQ8N257 126 aa12.61□□□□□ -0.39
RHBDD3-204ENST00000414672 AMELXQ99217 191 aa12.61□□□□□ -0.39
RHBDD3-204ENST00000414672 LINC01549A6NIU2 74 aa12.6□□□□□ -0.39
RHBDD3-204ENST00000414672 F8VRH5 84 aa12.6□□□□□ -0.39
RHBDD3-204ENST00000414672 FAT4Q6V0I7 4981 aa12.6□□□□□ -0.39
RHBDD3-204ENST00000414672 A0A096LNJ9 63 aa12.59□□□□□ -0.39
RHBDD3-204ENST00000414672 TOMM6Q96B49 74 aa12.59□□□□□ -0.39
RHBDD3-204ENST00000414672 LINC00167Q96N53 147 aa12.59□□□□□ -0.39
RHBDD3-204ENST00000414672 GAGE10A6NGK3 116 aa12.58□□□□□ -0.4
RHBDD3-204ENST00000414672 CDIP1Q9H305 208 aa12.58□□□□□ -0.4
RHBDD3-204ENST00000414672 CDKN2A-AS1Q9UH64 79 aa12.58□□□□□ -0.4
RHBDD3-204ENST00000414672 KRTAP9-6A0A140TA67 174 aa12.57□□□□□ -0.4
RHBDD3-204ENST00000414672 HERVK_113P63121 156 aa12.57□□□□□ -0.4
RHBDD3-204ENST00000414672 GEMIN7Q9H840 131 aaKnown RBP12.57□□□□□ -0.4
RHBDD3-204ENST00000414672 LEPROTL1O95214 131 aa12.56□□□□□ -0.4
RHBDD3-204ENST00000414672 UBE2AP49459 152 aa12.56□□□□□ -0.4
RHBDD3-204ENST00000414672 SEC11AP67812 179 aa12.56□□□□□ -0.4
RHBDD3-204ENST00000414672 HSPB8Q9UJY1 196 aa12.56□□□□□ -0.4
RHBDD3-204ENST00000414672 FABP4P15090 132 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms