RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 DEFB113Q30KQ7 82 aa9.77□□□□□ -0.85
LINC00887-202ENST00000414120 MAPK1IP1LQ8NDC0 245 aa9.77□□□□□ -0.85
LINC00887-202ENST00000414120 IGLV5-45A0A087WSX0 123 aa9.77□□□□□ -0.85
LINC00887-202ENST00000414120 IGKV2-29A2NJV5 120 aaPredicted RBP9.77□□□□□ -0.85
LINC00887-202ENST00000414120 HCG22E2RYF7 251 aa9.76□□□□□ -0.85
LINC00887-202ENST00000414120 PDZD2O15018 2839 aa9.76□□□□□ -0.85
LINC00887-202ENST00000414120 TEP1Q99973 2627 aaKnown RBP9.75□□□□□ -0.85
LINC00887-202ENST00000414120 PDE6GP18545 87 aa9.75□□□□□ -0.85
LINC00887-202ENST00000414120 BPY2O14599 106 aa9.74□□□□□ -0.85
LINC00887-202ENST00000414120 SVEP1Q4LDE5 3571 aa9.74□□□□□ -0.85
LINC00887-202ENST00000414120 K7EIM0 57 aa9.74□□□□□ -0.85
LINC00887-202ENST00000414120 CCL24O00175 119 aa9.74□□□□□ -0.85
LINC00887-202ENST00000414120 IGFL4Q6B9Z1 124 aa9.74□□□□□ -0.85
LINC00887-202ENST00000414120 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
LINC00887-202ENST00000414120 F8P00451 2351 aa9.74□□□□□ -0.85
LINC00887-202ENST00000414120 IGHV4-30-2A0A087WSY4 118 aa9.73□□□□□ -0.85
LINC00887-202ENST00000414120 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
LINC00887-202ENST00000414120 OCR1Q9BZK8 76 aa9.73□□□□□ -0.85
LINC00887-202ENST00000414120 IGHV3-21A0A0B4J1V1 117 aa9.73□□□□□ -0.85
LINC00887-202ENST00000414120 LECT2O14960 151 aa9.73□□□□□ -0.85
LINC00887-202ENST00000414120 S100A4P26447 101 aaKnown RBP9.73□□□□□ -0.85
LINC00887-202ENST00000414120 LINC01356Q8N9X3 169 aa9.73□□□□□ -0.85
LINC00887-202ENST00000414120 CYSRT1A8MQ03 144 aa9.72□□□□□ -0.85
LINC00887-202ENST00000414120 NAV3Q8IVL0 2385 aa9.72□□□□□ -0.85
LINC00887-202ENST00000414120 IGLV5-39A0A0G2JS06 123 aa9.72□□□□□ -0.85
LINC00887-202ENST00000414120 LCE6AA0A183 80 aa9.72□□□□□ -0.85
LINC00887-202ENST00000414120 CDC42SE1Q9NRR8 79 aa9.72□□□□□ -0.85
LINC00887-202ENST00000414120 IGHV1OR15-1A0A075B7D0 117 aa9.71□□□□□ -0.85
LINC00887-202ENST00000414120 Q75L30 129 aa9.71□□□□□ -0.85
LINC00887-202ENST00000414120 OTOGQ6ZRI0 2925 aa9.71□□□□□ -0.86
LINC00887-202ENST00000414120 SMIM11BQ8TCY0 68 aa9.71□□□□□ -0.86
LINC00887-202ENST00000414120 LINC00313P59037 77 aa9.7□□□□□ -0.86
LINC00887-202ENST00000414120 ZNRF1Q8ND25 227 aa9.7□□□□□ -0.86
LINC00887-202ENST00000414120 LYPD2Q6UXB3 125 aa9.7□□□□□ -0.86
LINC00887-202ENST00000414120 Q6ZQT0 140 aa9.7□□□□□ -0.86
LINC00887-202ENST00000414120 SPTSSBQ8NFR3 76 aa9.7□□□□□ -0.86
LINC00887-202ENST00000414120 PRAC2D3DTV9 90 aa9.69□□□□□ -0.86
LINC00887-202ENST00000414120 CHKB-CPT1BH3BT56 60 aa9.69□□□□□ -0.86
LINC00887-202ENST00000414120 PRB4P10163 310 aaPredicted RBP9.69□□□□□ -0.86
LINC00887-202ENST00000414120 IGHV4-61A0A0C4DH41 118 aa9.69□□□□□ -0.86
LINC00887-202ENST00000414120 MP68P56378 58 aa9.69□□□□□ -0.86
LINC00887-202ENST00000414120 ASB16-AS1Q495Z4 193 aa9.69□□□□□ -0.86
LINC00887-202ENST00000414120 KLLNB2CW77 178 aa9.68□□□□□ -0.86
LINC00887-202ENST00000414120 RPL11P62913 178 aaKnown RBP9.68□□□□□ -0.86
LINC00887-202ENST00000414120 HIVEP1P15822 2718 aa9.68□□□□□ -0.86
LINC00887-202ENST00000414120 A0A087X002 238 aa9.68□□□□□ -0.86
LINC00887-202ENST00000414120 HIVEP2P31629 2446 aa9.67□□□□□ -0.86
LINC00887-202ENST00000414120 TRBV10-1A0A0K0K1A3 114 aa9.67□□□□□ -0.86
LINC00887-202ENST00000414120 A8MU10 97 aa9.67□□□□□ -0.86
LINC00887-202ENST00000414120 H3BQ85 93 aa9.67□□□□□ -0.86
LINC00887-202ENST00000414120 HAMPP81172 84 aa9.67□□□□□ -0.86
LINC00887-202ENST00000414120 FAM104AQ969W3 186 aa9.67□□□□□ -0.86
LINC00887-202ENST00000414120 C9orf66Q5T8R8 295 aa9.66□□□□□ -0.86
LINC00887-202ENST00000414120 JMJD1CQ15652 2540 aa9.66□□□□□ -0.86
LINC00887-202ENST00000414120 RPL36AP83881 106 aaKnown RBP9.66□□□□□ -0.86
LINC00887-202ENST00000414120 RPL36ALQ969Q0 106 aaKnown RBP9.66□□□□□ -0.86
LINC00887-202ENST00000414120 MDFIQ99750 246 aa9.66□□□□□ -0.86
LINC00887-202ENST00000414120 ABCA2Q9BZC7 2435 aa9.66□□□□□ -0.86
LINC00887-202ENST00000414120 ZNF469Q96JG9 3925 aaPredicted RBP9.66□□□□□ -0.86
LINC00887-202ENST00000414120 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
LINC00887-202ENST00000414120 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.65□□□□□ -0.86
LINC00887-202ENST00000414120 PRB3Q04118 309 aaPredicted RBP9.65□□□□□ -0.87
LINC00887-202ENST00000414120 ZFHX3Q15911 3703 aa9.64□□□□□ -0.87
LINC00887-202ENST00000414120 PLXNB1O43157 2135 aa9.64□□□□□ -0.87
LINC00887-202ENST00000414120 RNASE3P12724 160 aaKnown RBP9.64□□□□□ -0.87
LINC00887-202ENST00000414120 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
LINC00887-202ENST00000414120 LOC101927531A0A1B0GV80 90 aa9.64□□□□□ -0.87
LINC00887-202ENST00000414120 DSCR9P59020 149 aa9.64□□□□□ -0.87
LINC00887-202ENST00000414120 KRTAP1-3Q8IUG1 177 aa9.64□□□□□ -0.87
LINC00887-202ENST00000414120 GAFA1Q96PS6 74 aa9.64□□□□□ -0.87
LINC00887-202ENST00000414120 RNF5Q99942 180 aa9.64□□□□□ -0.87
LINC00887-202ENST00000414120 LY6G6DO95868 133 aa9.63□□□□□ -0.87
LINC00887-202ENST00000414120 K7EQG2 157 aa9.63□□□□□ -0.87
LINC00887-202ENST00000414120 IGKV2-28A0A075B6P5 120 aa9.62□□□□□ -0.87
LINC00887-202ENST00000414120 IGHV3-38A0A0C4DH36 116 aa9.62□□□□□ -0.87
LINC00887-202ENST00000414120 M0QY20 66 aa9.62□□□□□ -0.87
LINC00887-202ENST00000414120 IGKV2D-28P01615 120 aa9.62□□□□□ -0.87
LINC00887-202ENST00000414120 CDC42SE2Q9NRR3 84 aa9.62□□□□□ -0.87
LINC00887-202ENST00000414120 LMO4P61968 165 aa9.61□□□□□ -0.87
LINC00887-202ENST00000414120 ZCCHC13Q8WW36 166 aaKnown RBP9.61□□□□□ -0.87
LINC00887-202ENST00000414120 AKAP9Q99996 3911 aa9.61□□□□□ -0.87
LINC00887-202ENST00000414120 ZFP36P26651 326 aaKnown RBP9.61□□□□□ -0.87
LINC00887-202ENST00000414120 C19orf54Q5BKX5 351 aa9.61□□□□□ -0.87
LINC00887-202ENST00000414120 SMR3AQ99954 134 aa9.61□□□□□ -0.87
LINC00887-202ENST00000414120 HIGD2AQ9BW72 106 aa9.61□□□□□ -0.87
LINC00887-202ENST00000414120 H0Y9J4 135 aa9.6□□□□□ -0.87
LINC00887-202ENST00000414120 C3orf84H3BNL1 204 aa9.6□□□□□ -0.87
LINC00887-202ENST00000414120 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
LINC00887-202ENST00000414120 Q6ZTI0 123 aa9.6□□□□□ -0.87
LINC00887-202ENST00000414120 ZFAND2AQ8N6M9 145 aa9.6□□□□□ -0.87
LINC00887-202ENST00000414120 SETD2Q9BYW2 2564 aaPredicted RBP9.59□□□□□ -0.87
LINC00887-202ENST00000414120 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
LINC00887-202ENST00000414120 CCL3L1P16619 93 aa9.59□□□□□ -0.87
LINC00887-202ENST00000414120 Q8N9P0 234 aaPredicted RBP9.59□□□□□ -0.87
LINC00887-202ENST00000414120 SND1-IT1Q9HBX3 110 aa9.59□□□□□ -0.87
LINC00887-202ENST00000414120 PRR9Q5T870 116 aa9.59□□□□□ -0.87
LINC00887-202ENST00000414120 Q8N814 137 aa9.59□□□□□ -0.87
LINC00887-202ENST00000414120 F5H697 171 aa9.58□□□□□ -0.88
LINC00887-202ENST00000414120 NDUFB1O75438 58 aa9.58□□□□□ -0.88
LINC00887-202ENST00000414120 DEFB114Q30KQ6 69 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms