RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.52□□□□□ -0.57
ITGA6-204ENST00000412899 RPL18AQ02543 176 aaKnown RBP11.52□□□□□ -0.57
ITGA6-204ENST00000412899 KIAA0087Q14695 138 aa11.52□□□□□ -0.57
ITGA6-204ENST00000412899 C10orf25Q5T742 122 aa11.52□□□□□ -0.57
ITGA6-204ENST00000412899 CST9LQ9H4G1 147 aa11.52□□□□□ -0.57
ITGA6-204ENST00000412899 LRP2P98164 4655 aa11.51□□□□□ -0.57
ITGA6-204ENST00000412899 CDKN2A-AS1Q9UH64 79 aa11.51□□□□□ -0.57
ITGA6-204ENST00000412899 PRSS2P07478 247 aa11.5□□□□□ -0.57
ITGA6-204ENST00000412899 PMVKQ15126 192 aa11.5□□□□□ -0.57
ITGA6-204ENST00000412899 PMCHL1Q16048 86 aa11.5□□□□□ -0.57
ITGA6-204ENST00000412899 PACRGQ96M98 296 aaPredicted RBP11.5□□□□□ -0.57
ITGA6-204ENST00000412899 TOMM7Q9P0U1 55 aa11.5□□□□□ -0.57
ITGA6-204ENST00000412899 A0A096LNJ9 63 aa11.49□□□□□ -0.57
ITGA6-204ENST00000412899 TINCRA0A1B0GVN0 87 aa11.49□□□□□ -0.57
ITGA6-204ENST00000412899 HBDP02042 147 aa11.49□□□□□ -0.57
ITGA6-204ENST00000412899 C2orf82Q6UX34 121 aa11.49□□□□□ -0.57
ITGA6-204ENST00000412899 LINC00469Q8N7U9 141 aa11.49□□□□□ -0.57
ITGA6-204ENST00000412899 A0A1W2PNN7 141 aa11.48□□□□□ -0.57
ITGA6-204ENST00000412899 NDUFA6P56556 154 aa11.48□□□□□ -0.57
ITGA6-204ENST00000412899 C6orf226Q5I0X4 101 aa11.48□□□□□ -0.57
ITGA6-204ENST00000412899 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
ITGA6-204ENST00000412899 TNXBP22105 4242 aa11.48□□□□□ -0.57
ITGA6-204ENST00000412899 CKS1BP61024 79 aa11.47□□□□□ -0.57
ITGA6-204ENST00000412899 C9orf116Q5BN46 136 aaPredicted RBP11.46□□□□□ -0.57
ITGA6-204ENST00000412899 Q8IZM0 81 aa11.46□□□□□ -0.57
ITGA6-204ENST00000412899 TRBV30A0A0K0K1B3 111 aa11.45□□□□□ -0.58
ITGA6-204ENST00000412899 PDZD11Q5EBL8 140 aa11.45□□□□□ -0.58
ITGA6-204ENST00000412899 PSORS1C2Q9UIG4 136 aa11.45□□□□□ -0.58
ITGA6-204ENST00000412899 ATP5LO75964 103 aa11.44□□□□□ -0.58
ITGA6-204ENST00000412899 TRGC2P03986 189 aa11.44□□□□□ -0.58
ITGA6-204ENST00000412899 TLX1NBP0CAT3 122 aa11.44□□□□□ -0.58
ITGA6-204ENST00000412899 CHCHD1Q96BP2 118 aaKnown RBP11.44□□□□□ -0.58
ITGA6-204ENST00000412899 IGLV5-45A0A087WSX0 123 aa11.43□□□□□ -0.58
ITGA6-204ENST00000412899 GAGE2EQ4V326 116 aa11.43□□□□□ -0.58
ITGA6-204ENST00000412899 C1orf137Q5JT78 98 aa11.43□□□□□ -0.58
ITGA6-204ENST00000412899 GAGE2DQ9UEU5 116 aa11.43□□□□□ -0.58
ITGA6-204ENST00000412899 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
ITGA6-204ENST00000412899 PHF5AQ7RTV0 110 aaKnown RBP11.42□□□□□ -0.58
ITGA6-204ENST00000412899 BAGE3Q86Y29 109 aa11.42□□□□□ -0.58
ITGA6-204ENST00000412899 H3BRM9 83 aa11.41□□□□□ -0.58
ITGA6-204ENST00000412899 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
ITGA6-204ENST00000412899 RNF213Q63HN8 5207 aa11.4□□□□□ -0.58
ITGA6-204ENST00000412899 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.58
ITGA6-204ENST00000412899 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
ITGA6-204ENST00000412899 COLCA2A8K830 154 aa11.39□□□□□ -0.59
ITGA6-204ENST00000412899 F8VRH5 84 aa11.39□□□□□ -0.59
ITGA6-204ENST00000412899 COX7B2Q8TF08 81 aa11.39□□□□□ -0.59
ITGA6-204ENST00000412899 HSBP1O75506 76 aa11.38□□□□□ -0.59
ITGA6-204ENST00000412899 CXCL5P42830 114 aa11.38□□□□□ -0.59
ITGA6-204ENST00000412899 FAM168BA1KXE4 195 aa11.37□□□□□ -0.59
ITGA6-204ENST00000412899 FAM19A2Q8N3H0 131 aa11.36□□□□□ -0.59
ITGA6-204ENST00000412899 DIRC1Q969H9 104 aa11.36□□□□□ -0.59
ITGA6-204ENST00000412899 IFI27L1Q96BM0 104 aa11.36□□□□□ -0.59
ITGA6-204ENST00000412899 IGLV7-43P04211 117 aa11.35□□□□□ -0.59
ITGA6-204ENST00000412899 ZNF22P17026 224 aaPredicted RBP11.35□□□□□ -0.59
ITGA6-204ENST00000412899 FAM19A5Q7Z5A7 132 aaPredicted RBP11.35□□□□□ -0.59
ITGA6-204ENST00000412899 PRR26Q8N8Z3 221 aa11.35□□□□□ -0.59
ITGA6-204ENST00000412899 CHTOPQ9Y3Y2 248 aaKnown RBP11.34□□□□□ -0.59
ITGA6-204ENST00000412899 C11orf86A6NJI1 115 aa11.33□□□□□ -0.6
ITGA6-204ENST00000412899 SCO1O75880 301 aa11.33□□□□□ -0.6
ITGA6-204ENST00000412899 C9orf129Q5T035 196 aaKnown RBP11.33□□□□□ -0.6
ITGA6-204ENST00000412899 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
ITGA6-204ENST00000412899 SERF1AO75920 110 aa11.32□□□□□ -0.6
ITGA6-204ENST00000412899 TRAV12-1A0A0B4J245 112 aa11.31□□□□□ -0.6
ITGA6-204ENST00000412899 IGLV5-39A0A0G2JS06 123 aa11.31□□□□□ -0.6
ITGA6-204ENST00000412899 H0Y9J4 135 aa11.3□□□□□ -0.6
ITGA6-204ENST00000412899 XAGE1AQ9HD64 81 aa11.3□□□□□ -0.6
ITGA6-204ENST00000412899 LINC00310P59036 64 aa11.29□□□□□ -0.6
ITGA6-204ENST00000412899 KRTAP11-1Q8IUC1 163 aa11.29□□□□□ -0.6
ITGA6-204ENST00000412899 KRTAP7-1Q8IUC3 87 aa11.29□□□□□ -0.6
ITGA6-204ENST00000412899 M0QXV9 152 aa11.28□□□□□ -0.6
ITGA6-204ENST00000412899 LEPROTL1O95214 131 aa11.28□□□□□ -0.6
ITGA6-204ENST00000412899 H0Y8G0 127 aa11.27□□□□□ -0.61
ITGA6-204ENST00000412899 NUPR1O60356 82 aa11.27□□□□□ -0.61
ITGA6-204ENST00000412899 IGLV1-50A0A075B6I6 118 aa11.26□□□□□ -0.61
ITGA6-204ENST00000412899 UBE2BP63146 152 aa11.26□□□□□ -0.61
ITGA6-204ENST00000412899 FABP4P15090 132 aa11.25□□□□□ -0.61
ITGA6-204ENST00000412899 HSPB8Q9UJY1 196 aa11.25□□□□□ -0.61
ITGA6-204ENST00000412899 TMEM223A0PJW6 202 aa11.24□□□□□ -0.61
ITGA6-204ENST00000412899 PFN2P35080 140 aa11.23□□□□□ -0.61
ITGA6-204ENST00000412899 C22orf24Q9Y442 160 aa11.23□□□□□ -0.61
ITGA6-204ENST00000412899 SFTA2Q6UW10 78 aa11.22□□□□□ -0.61
ITGA6-204ENST00000412899 ZNF625Q96I27 306 aaPredicted RBP11.22□□□□□ -0.61
ITGA6-204ENST00000412899 HIST1H2BKO60814 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST1H2BJP06899 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 KRTAP1-4P0C5Y4 121 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST1H2BOP23527 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST1H2BBP33778 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST1H2BDP58876 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST1H2BCP62807 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST2H2BEQ16778 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 LBHQ53QV2 105 aaPredicted RBP11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST1H2BHQ93079 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST1H2BNQ99877 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 HIST1H2BMQ99879 126 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 ERG28Q9UKR5 140 aa11.21□□□□□ -0.61
ITGA6-204ENST00000412899 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
ITGA6-204ENST00000412899 COX17Q14061 63 aa11.19□□□□□ -0.62
ITGA6-204ENST00000412899 PRR4Q16378 134 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms