RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 PSCAO43653 123 aa6.78□□□□□ -1.32
LINC01643-201ENST00000412218 SMIM13P0DJ93 91 aa6.78□□□□□ -1.32
LINC01643-201ENST00000412218 FXYD2P54710 66 aa6.78□□□□□ -1.32
LINC01643-201ENST00000412218 TSPEAR-AS2P59090 65 aa6.78□□□□□ -1.32
LINC01643-201ENST00000412218 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
LINC01643-201ENST00000412218 VAMP3Q15836 100 aa6.78□□□□□ -1.32
LINC01643-201ENST00000412218 TRBV6-8A0A0A6YYG3 113 aa6.77□□□□□ -1.33
LINC01643-201ENST00000412218 RNASE13Q5GAN3 156 aaKnown RBP6.77□□□□□ -1.33
LINC01643-201ENST00000412218 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
LINC01643-201ENST00000412218 XGP55808 180 aa6.76□□□□□ -1.33
LINC01643-201ENST00000412218 SRSF9Q13242 221 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC01643-201ENST00000412218 UBE2V1Q13404 147 aa6.76□□□□□ -1.33
LINC01643-201ENST00000412218 Q8N814 137 aa6.76□□□□□ -1.33
LINC01643-201ENST00000412218 NTN5Q8WTR8 489 aaPredicted RBP6.76□□□□□ -1.33
LINC01643-201ENST00000412218 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
LINC01643-201ENST00000412218 NHP2Q9NX24 153 aaKnown RBP6.76□□□□□ -1.33
LINC01643-201ENST00000412218 IGLV5-52A0A0A0MRZ9 124 aa6.75□□□□□ -1.33
LINC01643-201ENST00000412218 A0A1B0GWB2 263 aa6.75□□□□□ -1.33
LINC01643-201ENST00000412218 Q6ZVH6 145 aa6.75□□□□□ -1.33
LINC01643-201ENST00000412218 IGHV3-64A0A075B6Q5 118 aa6.74□□□□□ -1.33
LINC01643-201ENST00000412218 TRAV8-3A0A0A6YYJ7 113 aa6.74□□□□□ -1.33
LINC01643-201ENST00000412218 GTF2H5Q6ZYL4 71 aa6.74□□□□□ -1.33
LINC01643-201ENST00000412218 CHCHD5Q9BSY4 110 aa6.74□□□□□ -1.33
LINC01643-201ENST00000412218 EPM2AB3EWF7 344 aa6.73□□□□□ -1.33
LINC01643-201ENST00000412218 H3BUT2 72 aa6.73□□□□□ -1.33
LINC01643-201ENST00000412218 SPINK8P0C7L1 97 aa6.73□□□□□ -1.33
LINC01643-201ENST00000412218 GAGE6Q13070 117 aa6.73□□□□□ -1.33
LINC01643-201ENST00000412218 WFDC2Q14508 124 aa6.73□□□□□ -1.33
LINC01643-201ENST00000412218 LINC00242Q5T6M2 205 aa6.73□□□□□ -1.33
LINC01643-201ENST00000412218 RAB37Q96AX2 223 aa6.73□□□□□ -1.33
LINC01643-201ENST00000412218 CDKN2A-AS1Q9UH64 79 aa6.73□□□□□ -1.33
LINC01643-201ENST00000412218 NDUFA12Q9UI09 145 aa6.73□□□□□ -1.33
LINC01643-201ENST00000412218 TRAV13-1A0A0B4J241 112 aa6.72□□□□□ -1.33
LINC01643-201ENST00000412218 IGLV5-39A0A0G2JS06 123 aa6.72□□□□□ -1.33
LINC01643-201ENST00000412218 A0A1W2PPM0 123 aa6.72□□□□□ -1.33
LINC01643-201ENST00000412218 TIMM17BO60830 172 aa6.72□□□□□ -1.33
LINC01643-201ENST00000412218 FABP2P12104 132 aa6.72□□□□□ -1.33
LINC01643-201ENST00000412218 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
LINC01643-201ENST00000412218 GAGE10A6NGK3 116 aa6.71□□□□□ -1.34
LINC01643-201ENST00000412218 K7EP34 96 aa6.71□□□□□ -1.34
LINC01643-201ENST00000412218 K7ERJ3 54 aa6.71□□□□□ -1.34
LINC01643-201ENST00000412218 NDUFA1O15239 70 aa6.71□□□□□ -1.34
LINC01643-201ENST00000412218 RPL24P83731 157 aaKnown RBP6.71□□□□□ -1.34
LINC01643-201ENST00000412218 SPANXDQ9BXN6 97 aa6.71□□□□□ -1.34
LINC01643-201ENST00000412218 SPANXCQ9NY87 97 aa6.71□□□□□ -1.34
LINC01643-201ENST00000412218 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.7□□□□□ -1.34
LINC01643-201ENST00000412218 A0A1B0GUV1 79 aa6.7□□□□□ -1.34
LINC01643-201ENST00000412218 SMIM1B2RUZ4 78 aa6.7□□□□□ -1.34
LINC01643-201ENST00000412218 LECT2O14960 151 aa6.7□□□□□ -1.34
LINC01643-201ENST00000412218 HAMPP81172 84 aa6.7□□□□□ -1.34
LINC01643-201ENST00000412218 LYRM7Q5U5X0 104 aa6.7□□□□□ -1.34
LINC01643-201ENST00000412218 Q5VSD8 79 aa6.7□□□□□ -1.34
LINC01643-201ENST00000412218 RMI2Q96E14 147 aa6.7□□□□□ -1.34
LINC01643-201ENST00000412218 KLK12Q9UKR0 248 aa6.7□□□□□ -1.34
LINC01643-201ENST00000412218 CCL25O15444 150 aa6.69□□□□□ -1.34
LINC01643-201ENST00000412218 HERV-K104P63124 156 aa6.69□□□□□ -1.34
LINC01643-201ENST00000412218 COX6A2Q02221 97 aa6.69□□□□□ -1.34
LINC01643-201ENST00000412218 CIRBPQ14011 172 aaKnown RBP6.69□□□□□ -1.34
LINC01643-201ENST00000412218 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
LINC01643-201ENST00000412218 SPCS1Q9Y6A9 102 aa6.69□□□□□ -1.34
LINC01643-201ENST00000412218 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
LINC01643-201ENST00000412218 IGKV2D-24A0A075B6R9 120 aa6.68□□□□□ -1.34
LINC01643-201ENST00000412218 IFITM1P13164 125 aa6.68□□□□□ -1.34
LINC01643-201ENST00000412218 MIAQ16674 131 aa6.68□□□□□ -1.34
LINC01643-201ENST00000412218 SFTA2Q6UW10 78 aa6.68□□□□□ -1.34
LINC01643-201ENST00000412218 UBE2WQ96B02 151 aa6.68□□□□□ -1.34
LINC01643-201ENST00000412218 FAM30AQ9NZY2 134 aa6.68□□□□□ -1.34
LINC01643-201ENST00000412218 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.67□□□□□ -1.34
LINC01643-201ENST00000412218 A0A0B4J2C4 111 aa6.67□□□□□ -1.34
LINC01643-201ENST00000412218 TMEM262E9PQX1 116 aa6.67□□□□□ -1.34
LINC01643-201ENST00000412218 SMR3BP02814 79 aaPredicted RBP6.67□□□□□ -1.34
LINC01643-201ENST00000412218 RBX1P62877 108 aa6.67□□□□□ -1.34
LINC01643-201ENST00000412218 SS18Q15532 418 aa6.67□□□□□ -1.34
LINC01643-201ENST00000412218 Q6ZSA8 131 aa6.67□□□□□ -1.34
LINC01643-201ENST00000412218 LINC01561Q8N1V8 128 aa6.67□□□□□ -1.34
LINC01643-201ENST00000412218 LITAFQ99732 161 aa6.67□□□□□ -1.34
LINC01643-201ENST00000412218 NAA38Q9BRA0 125 aaKnown RBP6.67□□□□□ -1.34
LINC01643-201ENST00000412218 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
LINC01643-201ENST00000412218 APOMO95445 188 aa6.66□□□□□ -1.34
LINC01643-201ENST00000412218 INAFM2P0DMQ5 153 aa6.66□□□□□ -1.34
LINC01643-201ENST00000412218 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
LINC01643-201ENST00000412218 ENHOQ6UWT2 76 aa6.66□□□□□ -1.34
LINC01643-201ENST00000412218 A0A087WZ39 114 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 IGKV3OR2-268A0A0C4DH90 116 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 A4D1N5 150 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 CRPP02741 224 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 CFC1BP0CG36 223 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 CFC1P0CG37 223 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 MUSTN1Q8IVN3 82 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 COX7B2Q8TF08 81 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 C1orf43Q9BWL3 253 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 PPDPFQ9H3Y8 114 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 PRO1854Q9UHT4 67 aa6.65□□□□□ -1.34
LINC01643-201ENST00000412218 IGHV3OR16-9A0A0B4J2B5 98 aa6.64□□□□□ -1.35
LINC01643-201ENST00000412218 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
LINC01643-201ENST00000412218 TSPAN13O95857 204 aa6.64□□□□□ -1.35
LINC01643-201ENST00000412218 ANGP03950 147 aaKnown RBP6.64□□□□□ -1.35
LINC01643-201ENST00000412218 MEIG1Q5JSS6 88 aa6.64□□□□□ -1.35
LINC01643-201ENST00000412218 ZNF625Q96I27 306 aaPredicted RBP6.64□□□□□ -1.35
LINC01643-201ENST00000412218 PRSS2P07478 247 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms