RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 RPL13AP40429 203 aaKnown RBP9.36□□□□□ -0.91
LIMS1-205ENST00000410093 ETDBQ3ZM63 59 aa9.36□□□□□ -0.91
LIMS1-205ENST00000410093 C6orf226Q5I0X4 101 aa9.36□□□□□ -0.91
LIMS1-205ENST00000410093 TEN1Q86WV5 123 aa9.36□□□□□ -0.91
LIMS1-205ENST00000410093 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
LIMS1-205ENST00000410093 H7C2G1 150 aa9.35□□□□□ -0.91
LIMS1-205ENST00000410093 TRIAP1O43715 76 aa9.35□□□□□ -0.91
LIMS1-205ENST00000410093 COX17Q14061 63 aa9.35□□□□□ -0.91
LIMS1-205ENST00000410093 COX7A2LO14548 114 aa9.34□□□□□ -0.91
LIMS1-205ENST00000410093 REG3AQ06141 175 aa9.34□□□□□ -0.91
LIMS1-205ENST00000410093 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
LIMS1-205ENST00000410093 PPDPFLQ8WWR9 84 aa9.34□□□□□ -0.91
LIMS1-205ENST00000410093 A0A096LPF7 62 aa9.33□□□□□ -0.92
LIMS1-205ENST00000410093 SLC25A20O43772 301 aa9.33□□□□□ -0.92
LIMS1-205ENST00000410093 ANGP03950 147 aaKnown RBP9.33□□□□□ -0.92
LIMS1-205ENST00000410093 XCL1P47992 114 aa9.33□□□□□ -0.92
LIMS1-205ENST00000410093 KRTAP10-11P60412 298 aa9.33□□□□□ -0.92
LIMS1-205ENST00000410093 NPC2P61916 151 aa9.33□□□□□ -0.92
LIMS1-205ENST00000410093 LINC01620Q4KN68 170 aa9.33□□□□□ -0.92
LIMS1-205ENST00000410093 DAND5Q8N907 189 aa9.33□□□□□ -0.92
LIMS1-205ENST00000410093 TGP01266 2768 aa9.32□□□□□ -0.92
LIMS1-205ENST00000410093 TRBV10-2A0A0K0K1G8 114 aa9.32□□□□□ -0.92
LIMS1-205ENST00000410093 SMCPP49901 116 aaPredicted RBP9.32□□□□□ -0.92
LIMS1-205ENST00000410093 LINC00158P58513 81 aa9.32□□□□□ -0.92
LIMS1-205ENST00000410093 FOXI1Q12951 378 aa9.32□□□□□ -0.92
LIMS1-205ENST00000410093 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
LIMS1-205ENST00000410093 TRAV8-4A0A0B4J246 113 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 H3BT86 120 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 K7EIL1 84 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 MIR7-3HGQ8N6C7 128 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 ANKRD29Q8N6D5 301 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 CHCHD10Q8WYQ3 142 aaPredicted RBP9.31□□□□□ -0.92
LIMS1-205ENST00000410093 C9JAW5 83 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 LST1O00453 97 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 HTN3P15516 51 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 CKS1BP61024 79 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 CFAP161Q6P656 301 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
LIMS1-205ENST00000410093 CRPP02741 224 aa9.3□□□□□ -0.92
LIMS1-205ENST00000410093 MALP21145 153 aa9.3□□□□□ -0.92
LIMS1-205ENST00000410093 CARD19Q96LW7 228 aa9.3□□□□□ -0.92
LIMS1-205ENST00000410093 KLK5Q9Y337 293 aaPredicted RBP9.3□□□□□ -0.92
LIMS1-205ENST00000410093 DNAH3Q8TD57 4116 aa9.29□□□□□ -0.92
LIMS1-205ENST00000410093 A0A0U1RRA0 63 aa9.29□□□□□ -0.92
LIMS1-205ENST00000410093 LYPD5Q6UWN5 251 aa9.29□□□□□ -0.92
LIMS1-205ENST00000410093 RPL28P46779 137 aaKnown RBP9.28□□□□□ -0.92
LIMS1-205ENST00000410093 MTURNQ8N3F0 131 aa9.27□□□□□ -0.93
LIMS1-205ENST00000410093 TRACP01848 142 aa9.26□□□□□ -0.93
LIMS1-205ENST00000410093 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
LIMS1-205ENST00000410093 SPATA25Q9BR10 227 aa9.26□□□□□ -0.93
LIMS1-205ENST00000410093 NDUFC2O95298 119 aa9.26□□□□□ -0.93
LIMS1-205ENST00000410093 CCL18P55774 89 aa9.26□□□□□ -0.93
LIMS1-205ENST00000410093 H0YGX0 51 aa9.25□□□□□ -0.93
LIMS1-205ENST00000410093 CLPSL2Q6UWE3 100 aa9.25□□□□□ -0.93
LIMS1-205ENST00000410093 B9D2Q9BPU9 175 aa9.25□□□□□ -0.93
LIMS1-205ENST00000410093 GAGE12HA6NDE8 117 aa9.24□□□□□ -0.93
LIMS1-205ENST00000410093 PFN2P35080 140 aa9.24□□□□□ -0.93
LIMS1-205ENST00000410093 C2orf82Q6UX34 121 aa9.24□□□□□ -0.93
LIMS1-205ENST00000410093 NBEAL2Q6ZNJ1 2754 aa9.23□□□□□ -0.93
LIMS1-205ENST00000410093 C11orf45Q8TAV5 145 aa9.23□□□□□ -0.93
LIMS1-205ENST00000410093 GVQW2A0A096LPI5 108 aaPredicted RBP9.22□□□□□ -0.93
LIMS1-205ENST00000410093 NHLRC4P0CG21 123 aaPredicted RBP9.22□□□□□ -0.93
LIMS1-205ENST00000410093 SIGMAR1Q99720 223 aa9.22□□□□□ -0.93
LIMS1-205ENST00000410093 KLK12Q9UKR0 248 aa9.22□□□□□ -0.93
LIMS1-205ENST00000410093 IGKV2-28A0A075B6P5 120 aa9.21□□□□□ -0.93
LIMS1-205ENST00000410093 A0A0J9YWU9 116 aa9.21□□□□□ -0.93
LIMS1-205ENST00000410093 F8WDY8 70 aa9.21□□□□□ -0.93
LIMS1-205ENST00000410093 IGKV2D-28P01615 120 aa9.21□□□□□ -0.93
LIMS1-205ENST00000410093 SCGB1A1P11684 91 aa9.21□□□□□ -0.93
LIMS1-205ENST00000410093 Q6ZTC4 211 aa9.21□□□□□ -0.93
LIMS1-205ENST00000410093 ENHOQ6UWT2 76 aa9.21□□□□□ -0.94
LIMS1-205ENST00000410093 LINC00337Q8N6G1 96 aa9.21□□□□□ -0.94
LIMS1-205ENST00000410093 C15orf53Q8NAA6 179 aa9.21□□□□□ -0.94
LIMS1-205ENST00000410093 CLEC2BQ92478 149 aa9.21□□□□□ -0.94
LIMS1-205ENST00000410093 UBE2WQ96B02 151 aa9.21□□□□□ -0.94
LIMS1-205ENST00000410093 RETNQ9HD89 108 aa9.21□□□□□ -0.94
LIMS1-205ENST00000410093 IGLV10-54A0A075B6I4 117 aa9.2□□□□□ -0.94
LIMS1-205ENST00000410093 DEFB131BA0A096LNP1 70 aa9.2□□□□□ -0.94
LIMS1-205ENST00000410093 PCP4P48539 62 aa9.2□□□□□ -0.94
LIMS1-205ENST00000410093 SPAG11BQ08648 103 aa9.2□□□□□ -0.94
LIMS1-205ENST00000410093 TRAV10A0A0B4J240 114 aa9.18□□□□□ -0.94
LIMS1-205ENST00000410093 A0A1B0GX51 115 aa9.18□□□□□ -0.94
LIMS1-205ENST00000410093 LINC01556Q5JQF7 62 aa9.18□□□□□ -0.94
LIMS1-205ENST00000410093 NTN5Q8WTR8 489 aaPredicted RBP9.18□□□□□ -0.94
LIMS1-205ENST00000410093 TM2D3Q9BRN9 247 aa9.18□□□□□ -0.94
LIMS1-205ENST00000410093 TMEM126AQ9H061 195 aa9.17□□□□□ -0.94
LIMS1-205ENST00000410093 Q8N3U1 123 aa9.16□□□□□ -0.94
LIMS1-205ENST00000410093 SMIM11BQ8TCY0 68 aa9.16□□□□□ -0.94
LIMS1-205ENST00000410093 WWC2-AS2Q96NR7 200 aa9.16□□□□□ -0.94
LIMS1-205ENST00000410093 FAM240AA0A1B0GVK7 77 aa9.15□□□□□ -0.94
LIMS1-205ENST00000410093 SNCGO76070 127 aa9.15□□□□□ -0.94
LIMS1-205ENST00000410093 DNAL4O96015 105 aa9.15□□□□□ -0.95
LIMS1-205ENST00000410093 ESRGQ1W209 222 aa9.15□□□□□ -0.95
LIMS1-205ENST00000410093 WFDC10BQ8IUB3 73 aa9.15□□□□□ -0.95
LIMS1-205ENST00000410093 OR13C6PQ8NH95 151 aa9.15□□□□□ -0.95
LIMS1-205ENST00000410093 C2orf48Q96LS8 159 aa9.15□□□□□ -0.95
LIMS1-205ENST00000410093 NANOS2P60321 138 aaKnown RBP9.14□□□□□ -0.95
LIMS1-205ENST00000410093 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms