RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MPV17LQ2QL34 196 aa2.28□□□□□ -2.04
LSM5-206ENST00000409987 UNQ5815/PRO19632Q6UWF5 114 aa2.28□□□□□ -2.04
LSM5-206ENST00000409987 C15orf53Q8NAA6 179 aa2.28□□□□□ -2.04
LSM5-206ENST00000409987 LINC00526Q96FQ7 95 aa2.28□□□□□ -2.04
LSM5-206ENST00000409987 COL7A1Q02388 2944 aa2.28□□□□□ -2.04
LSM5-206ENST00000409987 MPDZO75970 2070 aa2.28□□□□□ -2.04
LSM5-206ENST00000409987 HERC1Q15751 4861 aa2.28□□□□□ -2.04
LSM5-206ENST00000409987 TNRC6AQ8NDV7 1962 aaKnown RBP2.27□□□□□ -2.05
LSM5-206ENST00000409987 SLC25A6P12236 298 aa2.27□□□□□ -2.05
LSM5-206ENST00000409987 C9orf153Q5TBE3 101 aa2.27□□□□□ -2.05
LSM5-206ENST00000409987 C12orf73Q69YU5 71 aa2.27□□□□□ -2.05
LSM5-206ENST00000409987 CSAG1Q6PB30 78 aa2.27□□□□□ -2.05
LSM5-206ENST00000409987 LYPD5Q6UWN5 251 aa2.27□□□□□ -2.05
LSM5-206ENST00000409987 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
LSM5-206ENST00000409987 TMEM141Q96I45 108 aa2.27□□□□□ -2.05
LSM5-206ENST00000409987 MED9Q9NWA0 146 aa2.27□□□□□ -2.05
LSM5-206ENST00000409987 INTS1Q8N201 2190 aaKnown RBP2.27□□□□□ -2.05
LSM5-206ENST00000409987 M0R2N4 97 aa2.26□□□□□ -2.05
LSM5-206ENST00000409987 INE1O15225 51 aa2.26□□□□□ -2.05
LSM5-206ENST00000409987 PPYP01298 95 aa2.26□□□□□ -2.05
LSM5-206ENST00000409987 IGKCP01834 107 aa2.26□□□□□ -2.05
LSM5-206ENST00000409987 KRTAP13-4Q3LI77 160 aa2.26□□□□□ -2.05
LSM5-206ENST00000409987 SVBPQ8N300 66 aa2.26□□□□□ -2.05
LSM5-206ENST00000409987 CSMD3Q7Z407 3707 aa2.26□□□□□ -2.05
LSM5-206ENST00000409987 MDC1Q14676 2089 aaKnown RBP2.26□□□□□ -2.05
LSM5-206ENST00000409987 CHD3Q12873 2000 aaKnown RBP2.25□□□□□ -2.05
LSM5-206ENST00000409987 CACNA1CQ13936 2221 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 DNAH9Q9NYC9 4486 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 CXorf51AA0A1B0GTR3 108 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 JMJD7-PLA2G4BH0Y9G9 81 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 M0R143 59 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 HCRTO43612 131 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 IFNA17P01571 189 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 PRB4P10163 310 aaPredicted RBP2.25□□□□□ -2.05
LSM5-206ENST00000409987 IFITM1P13164 125 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 TFF3Q07654 80 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 LIMD2Q9BT23 127 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 TMEM14CQ9P0S9 112 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 NCOA6Q14686 2063 aaPredicted RBP2.25□□□□□ -2.05
LSM5-206ENST00000409987 CITO14578 2027 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 LYSTQ99698 3801 aa2.25□□□□□ -2.05
LSM5-206ENST00000409987 KIAA1549Q9HCM3 1950 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 IGLV3-32A0A0A0MS00 114 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 NUPR2A6NF83 97 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 OOSP1A8MZH6 123 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 IGHV3-30P01768 117 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 GYPBP06028 91 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 IGHV3-30-5P0DP03 117 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 NPC2P61916 151 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 RPL7L1Q6DKI1 246 aaKnown RBP2.24□□□□□ -2.05
LSM5-206ENST00000409987 SLC48A1Q6P1K1 146 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 C10orf105Q8TEF2 133 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 DMAC1Q96GE9 116 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 ATG5Q9H1Y0 275 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 MRPL36Q9P0J6 103 aaKnown RBP2.24□□□□□ -2.05
LSM5-206ENST00000409987 SNURFQ9Y675 71 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 TENM2Q9NT68 2774 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 SCN3AQ9NY46 2000 aa2.24□□□□□ -2.05
LSM5-206ENST00000409987 LOC110117498A0A087WWA1 95 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 PIGBOS1A0A0B4J2F0 54 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 TRBV10-1A0A0K0K1A3 114 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 A6NIN4 97 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 DNAL4O96015 105 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 SPINK8P0C7L1 97 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 C9orf116Q5BN46 136 aaPredicted RBP2.23□□□□□ -2.05
LSM5-206ENST00000409987 NDUFA11Q86Y39 141 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 Q8N8P6 123 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 TSKUQ8WUA8 353 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 ZNF625Q96I27 306 aaPredicted RBP2.23□□□□□ -2.05
LSM5-206ENST00000409987 MUC4Q99102 2169 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 ROS1P08922 2347 aa2.23□□□□□ -2.05
LSM5-206ENST00000409987 ABCA1O95477 2261 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 USF3Q68DE3 2245 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 FRAS1Q86XX4 4008 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 IGLV3-1P01715 115 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 PDE6GP18545 87 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 CBLN1P23435 193 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 PKIAP61925 76 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 UBE2G1P62253 170 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 IQCJQ1A5X6 159 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 LINC00322Q6ZN03 302 aaPredicted RBP2.22□□□□□ -2.05
LSM5-206ENST00000409987 C22orf24Q9Y442 160 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 ABCA13Q86UQ4 5058 aa2.22□□□□□ -2.05
LSM5-206ENST00000409987 IGKV3-7A0A075B6H7 116 aa2.21□□□□□ -2.06
LSM5-206ENST00000409987 SPRNQ5BIV9 151 aa2.21□□□□□ -2.06
LSM5-206ENST00000409987 S100A7L2Q5SY68 101 aa2.21□□□□□ -2.06
LSM5-206ENST00000409987 NCMAPQ5T1S8 102 aa2.21□□□□□ -2.06
LSM5-206ENST00000409987 ODF3Q96PU9 254 aa2.21□□□□□ -2.06
LSM5-206ENST00000409987 WFDC10AQ9H1F0 79 aa2.21□□□□□ -2.06
LSM5-206ENST00000409987 KIAA1109Q2LD37 5005 aa2.2□□□□□ -2.06
LSM5-206ENST00000409987 DNAH3Q8TD57 4116 aa2.2□□□□□ -2.06
LSM5-206ENST00000409987 PLECQ15149 4684 aaKnown RBP2.2□□□□□ -2.06
LSM5-206ENST00000409987 FAM24AA6NFZ4 105 aa2.2□□□□□ -2.06
LSM5-206ENST00000409987 TFF1P04155 84 aa2.2□□□□□ -2.06
LSM5-206ENST00000409987 TTC9CQ8N5M4 171 aa2.2□□□□□ -2.06
LSM5-206ENST00000409987 AQP10Q96PS8 301 aa2.2□□□□□ -2.06
LSM5-206ENST00000409987 DSCR8Q96T75 97 aa2.2□□□□□ -2.06
LSM5-206ENST00000409987 DNAH7Q8WXX0 4024 aa2.2□□□□□ -2.06
LSM5-206ENST00000409987 TCRBV3S1A0A5B6 114 aa2.19□□□□□ -2.06
LSM5-206ENST00000409987 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms