RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CFC1P0CG37 223 aa6.76□□□□□ -1.33
NIF3L1-202ENST00000409020 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
NIF3L1-202ENST00000409020 FMC1Q96HJ9 113 aa6.76□□□□□ -1.33
NIF3L1-202ENST00000409020 FAM167A-AS1Q96KT0 104 aa6.76□□□□□ -1.33
NIF3L1-202ENST00000409020 NOP10Q9NPE3 64 aaKnown RBP6.76□□□□□ -1.33
NIF3L1-202ENST00000409020 TRAV12-1A0A0B4J245 112 aa6.75□□□□□ -1.33
NIF3L1-202ENST00000409020 TRAV12-3A0A0B4J271 114 aa6.75□□□□□ -1.33
NIF3L1-202ENST00000409020 TCRAP04437 139 aa6.75□□□□□ -1.33
NIF3L1-202ENST00000409020 TMEM243Q9BU79 118 aa6.75□□□□□ -1.33
NIF3L1-202ENST00000409020 TRBV6-1A0A0K0K1D8 114 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 IGHV3-33P01772 117 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 PRR9Q5T870 116 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 UBE2DNLQ8IWF7 75 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 DAND5Q8N907 189 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 TMEM263Q8WUH6 116 aaKnown RBP6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 C16orf74Q96GX8 76 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 TMEM14CQ9P0S9 112 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 NACAE9PAV3 2078 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 IGKV2-40A0A087WW87 121 aaPredicted RBP6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 IGKV2D-40P01614 121 aaPredicted RBP6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 ZNF22P17026 224 aaPredicted RBP6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 MRPL53Q96EL3 112 aaKnown RBP6.74□□□□□ -1.33
NIF3L1-202ENST00000409020 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.73□□□□□ -1.33
NIF3L1-202ENST00000409020 Q6ZR54 194 aa6.73□□□□□ -1.33
NIF3L1-202ENST00000409020 Q9UF83 564 aa6.73□□□□□ -1.33
NIF3L1-202ENST00000409020 LOC389332A0A1B0GUA5 103 aa6.72□□□□□ -1.33
NIF3L1-202ENST00000409020 D6R8Y8 96 aa6.72□□□□□ -1.33
NIF3L1-202ENST00000409020 H7C423 109 aa6.72□□□□□ -1.33
NIF3L1-202ENST00000409020 BCE1O60756 84 aa6.72□□□□□ -1.33
NIF3L1-202ENST00000409020 ORMDL2Q53FV1 153 aa6.72□□□□□ -1.33
NIF3L1-202ENST00000409020 MRPL35Q9NZE8 188 aaKnown RBP6.72□□□□□ -1.33
NIF3L1-202ENST00000409020 FAT1Q14517 4588 aa6.72□□□□□ -1.33
NIF3L1-202ENST00000409020 F8VRH5 84 aa6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 IGHV3-30P01768 117 aa6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 IGHV3-30-5P0DP03 117 aa6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 RNASE4P34096 147 aaKnown RBP6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 DAZ2Q13117 558 aaKnown RBP6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 PDE6HQ13956 83 aa6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 SCGB1D4Q6XE38 83 aa6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 Q6ZTI0 123 aa6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 DAZ4Q86SG3 579 aaKnown RBP6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 LINC00612Q8N6U2 182 aa6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 Q8TAT8 98 aa6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 DAZ3Q9NR90 486 aaKnown RBP6.71□□□□□ -1.33
NIF3L1-202ENST00000409020 A0A0J9YY99 117 aa6.71□□□□□ -1.34
NIF3L1-202ENST00000409020 ZNF815PA8K554 130 aa6.71□□□□□ -1.34
NIF3L1-202ENST00000409020 KLLNB2CW77 178 aa6.71□□□□□ -1.34
NIF3L1-202ENST00000409020 FHL2Q14192 279 aa6.71□□□□□ -1.34
NIF3L1-202ENST00000409020 Q6JHZ5 121 aa6.71□□□□□ -1.34
NIF3L1-202ENST00000409020 ZFAND2AQ8N6M9 145 aa6.71□□□□□ -1.34
NIF3L1-202ENST00000409020 C11orf72Q8NBR9 251 aa6.71□□□□□ -1.34
NIF3L1-202ENST00000409020 SMCR5Q8TEV8 140 aa6.71□□□□□ -1.34
NIF3L1-202ENST00000409020 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.34
NIF3L1-202ENST00000409020 COX6CP09669 75 aa6.7□□□□□ -1.34
NIF3L1-202ENST00000409020 C9orf47Q6ZRZ4 202 aa6.7□□□□□ -1.34
NIF3L1-202ENST00000409020 SLC25A29Q8N8R3 303 aa6.7□□□□□ -1.34
NIF3L1-202ENST00000409020 VSIG2Q96IQ7 327 aa6.7□□□□□ -1.34
NIF3L1-202ENST00000409020 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
NIF3L1-202ENST00000409020 PAX4O43316 350 aa6.69□□□□□ -1.34
NIF3L1-202ENST00000409020 ARMS2P0C7Q2 107 aa6.69□□□□□ -1.34
NIF3L1-202ENST00000409020 IGHV1-58A0A0C4DH39 117 aa6.68□□□□□ -1.34
NIF3L1-202ENST00000409020 MRPL51Q4U2R6 128 aaKnown RBP6.68□□□□□ -1.34
NIF3L1-202ENST00000409020 Q9H3A6 140 aa6.68□□□□□ -1.34
NIF3L1-202ENST00000409020 USP17L23D6RBM5 183 aa6.68□□□□□ -1.34
NIF3L1-202ENST00000409020 VPREB1P12018 145 aa6.68□□□□□ -1.34
NIF3L1-202ENST00000409020 CKS2P33552 79 aa6.68□□□□□ -1.34
NIF3L1-202ENST00000409020 KRTAP1-5Q9BYS1 174 aa6.68□□□□□ -1.34
NIF3L1-202ENST00000409020 DNAH8Q96JB1 4490 aa6.67□□□□□ -1.34
NIF3L1-202ENST00000409020 TRGV1A0A0A0MS02 117 aa6.67□□□□□ -1.34
NIF3L1-202ENST00000409020 NDUFC1O43677 76 aa6.67□□□□□ -1.34
NIF3L1-202ENST00000409020 IGHV1OR15-1A0A075B7D0 117 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 NBDYA0A0U1RRE5 68 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 LST1O00453 97 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 IGHV3-53P01767 116 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 INAFM2P0DMQ5 153 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 ESRGQ1W209 222 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 PAPPA-AS1Q5QFB9 102 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 C1orf134Q5TEV5 83 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 LINC00467Q9BRT7 94 aa6.66□□□□□ -1.34
NIF3L1-202ENST00000409020 TRGV2A0A075B6R0 118 aa6.65□□□□□ -1.34
NIF3L1-202ENST00000409020 XCL1P47992 114 aa6.65□□□□□ -1.34
NIF3L1-202ENST00000409020 ZNF575Q86XF7 245 aa6.65□□□□□ -1.34
NIF3L1-202ENST00000409020 TIMM21Q9BVV7 248 aa6.65□□□□□ -1.34
NIF3L1-202ENST00000409020 TIMM17BO60830 172 aa6.65□□□□□ -1.35
NIF3L1-202ENST00000409020 CCKP06307 115 aa6.65□□□□□ -1.35
NIF3L1-202ENST00000409020 CCL18P55774 89 aa6.65□□□□□ -1.35
NIF3L1-202ENST00000409020 RHOHQ15669 191 aa6.65□□□□□ -1.35
NIF3L1-202ENST00000409020 A0A096LPF7 62 aa6.64□□□□□ -1.35
NIF3L1-202ENST00000409020 H7BZZ5 65 aa6.64□□□□□ -1.35
NIF3L1-202ENST00000409020 LGALS3P17931 250 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-202ENST00000409020 Q1RN00 199 aa6.64□□□□□ -1.35
NIF3L1-202ENST00000409020 Q86TA4 180 aa6.64□□□□□ -1.35
NIF3L1-202ENST00000409020 LYPD1Q8N2G4 141 aa6.64□□□□□ -1.35
NIF3L1-202ENST00000409020 MUC4Q99102 2169 aa6.64□□□□□ -1.35
NIF3L1-202ENST00000409020 IBA57-AS1B1ANH7 110 aa6.63□□□□□ -1.35
NIF3L1-202ENST00000409020 Q9H8V8 135 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms