RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 LRCOL1A6NCL2 159 aa13.46□□□□□ -0.26
CHKB-201ENST00000406938 ZNF561-AS1K7EIQ3 104 aa13.46□□□□□ -0.26
CHKB-201ENST00000406938 COX8AP10176 69 aa13.46□□□□□ -0.26
CHKB-201ENST00000406938 ZNF815PA8K554 130 aa13.45□□□□□ -0.26
CHKB-201ENST00000406938 C2orf82Q6UX34 121 aa13.45□□□□□ -0.26
CHKB-201ENST00000406938 CKS1BP61024 79 aa13.44□□□□□ -0.26
CHKB-201ENST00000406938 ZNF625Q96I27 306 aaPredicted RBP13.44□□□□□ -0.26
CHKB-201ENST00000406938 MYMXA0A1B0GTQ4 84 aa13.43□□□□□ -0.26
CHKB-201ENST00000406938 NDUFA1O15239 70 aa13.43□□□□□ -0.26
CHKB-201ENST00000406938 CXCL5P42830 114 aa13.43□□□□□ -0.26
CHKB-201ENST00000406938 HNRNPA3P51991 378 aaKnown RBP13.43□□□□□ -0.26
CHKB-201ENST00000406938 SLC25A34Q6PIV7 304 aa13.43□□□□□ -0.26
CHKB-201ENST00000406938 NTN5Q8WTR8 489 aaPredicted RBP13.43□□□□□ -0.26
CHKB-201ENST00000406938 BOD1L2Q8IYS8 172 aa13.42□□□□□ -0.26
CHKB-201ENST00000406938 RYR2Q92736 4967 aa13.42□□□□□ -0.26
CHKB-201ENST00000406938 RTL8CO15255 209 aa13.42□□□□□ -0.26
CHKB-201ENST00000406938 C2orf48Q96LS8 159 aa13.41□□□□□ -0.26
CHKB-201ENST00000406938 C14orf177Q52M58 125 aa13.4□□□□□ -0.26
CHKB-201ENST00000406938 CAMK2N2Q96S95 79 aa13.4□□□□□ -0.26
CHKB-201ENST00000406938 A0A087WTM6 91 aa13.39□□□□□ -0.27
CHKB-201ENST00000406938 C10orf25Q5T742 122 aa13.39□□□□□ -0.27
CHKB-201ENST00000406938 SFTA2Q6UW10 78 aa13.39□□□□□ -0.27
CHKB-201ENST00000406938 UNQ6190/PRO20217Q6UXQ8 127 aa13.39□□□□□ -0.27
CHKB-201ENST00000406938 SNHG12Q9BXW3 62 aa13.39□□□□□ -0.27
CHKB-201ENST00000406938 DLEU1O43261 78 aa13.39□□□□□ -0.27
CHKB-201ENST00000406938 HERV-K104P63124 156 aa13.38□□□□□ -0.27
CHKB-201ENST00000406938 SLPIP03973 132 aa13.37□□□□□ -0.27
CHKB-201ENST00000406938 TNP2Q05952 138 aa13.37□□□□□ -0.27
CHKB-201ENST00000406938 SCGB1D4Q6XE38 83 aa13.37□□□□□ -0.27
CHKB-201ENST00000406938 Q6ZRU5 148 aa13.37□□□□□ -0.27
CHKB-201ENST00000406938 A0A0J9YXY3 114 aa13.36□□□□□ -0.27
CHKB-201ENST00000406938 F8WDY8 70 aa13.36□□□□□ -0.27
CHKB-201ENST00000406938 Q8N814 137 aa13.36□□□□□ -0.27
CHKB-201ENST00000406938 FRAS1Q86XX4 4008 aa13.36□□□□□ -0.27
CHKB-201ENST00000406938 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.35□□□□□ -0.27
CHKB-201ENST00000406938 SYCNQ0VAF6 134 aa13.35□□□□□ -0.27
CHKB-201ENST00000406938 CARD19Q96LW7 228 aa13.35□□□□□ -0.27
CHKB-201ENST00000406938 C6orf48Q9UBA6 75 aa13.35□□□□□ -0.27
CHKB-201ENST00000406938 DNAH17Q9UFH2 4485 aa13.34□□□□□ -0.27
CHKB-201ENST00000406938 EREGO14944 169 aa13.34□□□□□ -0.27
CHKB-201ENST00000406938 COL5A1-AS1Q5SY13 56 aa13.34□□□□□ -0.27
CHKB-201ENST00000406938 C9orf116Q5BN46 136 aaPredicted RBP13.33□□□□□ -0.28
CHKB-201ENST00000406938 MEIG1Q5JSS6 88 aa13.33□□□□□ -0.28
CHKB-201ENST00000406938 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
CHKB-201ENST00000406938 CNBPP62633 177 aaKnown RBP13.32□□□□□ -0.28
CHKB-201ENST00000406938 C2orf91Q6ZV80 131 aa13.32□□□□□ -0.28
CHKB-201ENST00000406938 ERG28Q9UKR5 140 aa13.32□□□□□ -0.28
CHKB-201ENST00000406938 A0A0U1RRA0 63 aa13.3□□□□□ -0.28
CHKB-201ENST00000406938 PFN2P35080 140 aa13.3□□□□□ -0.28
CHKB-201ENST00000406938 LITAFQ99732 161 aa13.3□□□□□ -0.28
CHKB-201ENST00000406938 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.29□□□□□ -0.28
CHKB-201ENST00000406938 SMIM13P0DJ93 91 aa13.29□□□□□ -0.28
CHKB-201ENST00000406938 A0A1B0GV90 55 aa13.28□□□□□ -0.28
CHKB-201ENST00000406938 TIMM17BO60830 172 aa13.28□□□□□ -0.28
CHKB-201ENST00000406938 CIRBPQ14011 172 aaKnown RBP13.28□□□□□ -0.28
CHKB-201ENST00000406938 BATFQ16520 125 aa13.28□□□□□ -0.28
CHKB-201ENST00000406938 HIGD1BQ9P298 99 aa13.28□□□□□ -0.28
CHKB-201ENST00000406938 TMEM238C9JI98 176 aa13.27□□□□□ -0.29
CHKB-201ENST00000406938 LINC00158P58513 81 aa13.27□□□□□ -0.29
CHKB-201ENST00000406938 RNF151Q2KHN1 245 aa13.27□□□□□ -0.29
CHKB-201ENST00000406938 ADAMTSL4-AS1Q5T5F5 129 aa13.27□□□□□ -0.29
CHKB-201ENST00000406938 COX17Q14061 63 aa13.26□□□□□ -0.29
CHKB-201ENST00000406938 DAND5Q8N907 189 aa13.26□□□□□ -0.29
CHKB-201ENST00000406938 FAT2Q9NYQ8 4349 aa13.26□□□□□ -0.29
CHKB-201ENST00000406938 HINT1P49773 126 aaPredicted RBP13.24□□□□□ -0.29
CHKB-201ENST00000406938 FUSP35637 526 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHKB-201ENST00000406938 LINC00336Q6ZUF6 198 aa13.24□□□□□ -0.29
CHKB-201ENST00000406938 MIR7-3HGQ8N6C7 128 aa13.24□□□□□ -0.29
CHKB-201ENST00000406938 SPANXB1Q9NS25 103 aaPredicted RBP13.24□□□□□ -0.29
CHKB-201ENST00000406938 RYR3Q15413 4870 aa13.23□□□□□ -0.29
CHKB-201ENST00000406938 NDUFC2-KCTD14E9PQ53 114 aa13.22□□□□□ -0.29
CHKB-201ENST00000406938 SPANXDQ9BXN6 97 aa13.22□□□□□ -0.29
CHKB-201ENST00000406938 SPANXCQ9NY87 97 aa13.22□□□□□ -0.29
CHKB-201ENST00000406938 SRSF9Q13242 221 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHKB-201ENST00000406938 C9orf163Q8N9P6 203 aa13.21□□□□□ -0.29
CHKB-201ENST00000406938 TLX1NBP0CAT3 122 aa13.21□□□□□ -0.3
CHKB-201ENST00000406938 RPL18AQ02543 176 aaKnown RBP13.21□□□□□ -0.3
CHKB-201ENST00000406938 LINC01620Q4KN68 170 aa13.21□□□□□ -0.3
CHKB-201ENST00000406938 Q6ZRP5 223 aa13.21□□□□□ -0.3
CHKB-201ENST00000406938 HIST1H4GQ99525 98 aa13.21□□□□□ -0.3
CHKB-201ENST00000406938 IGLV5-52A0A0A0MRZ9 124 aa13.2□□□□□ -0.3
CHKB-201ENST00000406938 KRTAP10-2P60368 255 aa13.2□□□□□ -0.3
CHKB-201ENST00000406938 NPC2P61916 151 aa13.2□□□□□ -0.3
CHKB-201ENST00000406938 LOC107984640A0A0U1RRK4 108 aa13.18□□□□□ -0.3
CHKB-201ENST00000406938 Q6ZVH6 145 aa13.18□□□□□ -0.3
CHKB-201ENST00000406938 HSD52Q0P140 79 aa13.17□□□□□ -0.3
CHKB-201ENST00000406938 GAGE2EQ4V326 116 aa13.17□□□□□ -0.3
CHKB-201ENST00000406938 SND1-IT1Q9HBX3 110 aa13.17□□□□□ -0.3
CHKB-201ENST00000406938 GAGE2DQ9UEU5 116 aa13.17□□□□□ -0.3
CHKB-201ENST00000406938 DNAH11Q96DT5 4516 aa13.17□□□□□ -0.3
CHKB-201ENST00000406938 EIF4EBP3O60516 100 aaPredicted RBP13.17□□□□□ -0.3
CHKB-201ENST00000406938 BVES-AS1Q5T3Y7 98 aa13.17□□□□□ -0.3
CHKB-201ENST00000406938 LINC00308Q8TCZ7 52 aa13.17□□□□□ -0.3
CHKB-201ENST00000406938 HECTD4Q9Y4D8 3996 aa13.16□□□□□ -0.3
CHKB-201ENST00000406938 GCSHP23434 173 aa13.16□□□□□ -0.3
CHKB-201ENST00000406938 SOSTDC1Q6X4U4 206 aa13.16□□□□□ -0.3
CHKB-201ENST00000406938 XAGE1AQ9HD64 81 aa13.16□□□□□ -0.3
CHKB-201ENST00000406938 TAL2Q16559 108 aa13.15□□□□□ -0.3
CHKB-201ENST00000406938 IFITM1P13164 125 aa13.14□□□□□ -0.31
CHKB-201ENST00000406938 GAGE2BQ13066 116 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms