RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PRR9Q5T870 116 aa8.75□□□□□ -1.01
SMCR8-201ENST00000406438 OXLD1Q5BKU9 147 aa8.75□□□□□ -1.01
SMCR8-201ENST00000406438 POLR2KP53803 58 aaKnown RBP8.75□□□□□ -1.01
SMCR8-201ENST00000406438 NTM-AS1Q6ZSK4 140 aa8.75□□□□□ -1.01
SMCR8-201ENST00000406438 POM121L12Q8N7R1 296 aa8.75□□□□□ -1.01
SMCR8-201ENST00000406438 CNFNQ9BYD5 112 aa8.75□□□□□ -1.01
SMCR8-201ENST00000406438 Q6ZS46 218 aa8.74□□□□□ -1.01
SMCR8-201ENST00000406438 CELA1Q9UNI1 258 aa8.74□□□□□ -1.01
SMCR8-201ENST00000406438 Q6JHZ5 121 aa8.74□□□□□ -1.01
SMCR8-201ENST00000406438 EGFEM1PQ0D2K5 195 aa8.74□□□□□ -1.01
SMCR8-201ENST00000406438 LINC01556Q5JQF7 62 aa8.73□□□□□ -1.01
SMCR8-201ENST00000406438 LINC01547P58512 204 aaPredicted RBP8.73□□□□□ -1.01
SMCR8-201ENST00000406438 PRRC2CQ9Y520 2896 aaKnown RBP8.73□□□□□ -1.01
SMCR8-201ENST00000406438 LINC00208Q96KT6 92 aa8.72□□□□□ -1.01
SMCR8-201ENST00000406438 CHCHD7Q9BUK0 85 aa8.72□□□□□ -1.01
SMCR8-201ENST00000406438 PMAIP1Q13794 54 aa8.72□□□□□ -1.01
SMCR8-201ENST00000406438 C6orf223Q8N319 242 aa8.72□□□□□ -1.01
SMCR8-201ENST00000406438 RETNLBQ9BQ08 111 aa8.72□□□□□ -1.01
SMCR8-201ENST00000406438 F8WDY8 70 aa8.71□□□□□ -1.01
SMCR8-201ENST00000406438 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.01
SMCR8-201ENST00000406438 SMIM26A0A096LP01 95 aa8.71□□□□□ -1.02
SMCR8-201ENST00000406438 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.02
SMCR8-201ENST00000406438 CCDC179H3BU77 68 aa8.71□□□□□ -1.02
SMCR8-201ENST00000406438 TRBV10-3A0A0K0K1G6 114 aa8.71□□□□□ -1.02
SMCR8-201ENST00000406438 CRIP3Q6Q6R5 217 aa8.7□□□□□ -1.02
SMCR8-201ENST00000406438 IGIPA6NJ69 53 aa8.7□□□□□ -1.02
SMCR8-201ENST00000406438 Q9BRP9 147 aa8.7□□□□□ -1.02
SMCR8-201ENST00000406438 ZNF462Q96JM2 2506 aa8.7□□□□□ -1.02
SMCR8-201ENST00000406438 LIMD2Q9BT23 127 aa8.69□□□□□ -1.02
SMCR8-201ENST00000406438 COX6A2Q02221 97 aa8.69□□□□□ -1.02
SMCR8-201ENST00000406438 Q6Q795 121 aa8.69□□□□□ -1.02
SMCR8-201ENST00000406438 YPEL4Q96NS1 127 aa8.69□□□□□ -1.02
SMCR8-201ENST00000406438 C11orf21Q9P2W6 132 aa8.68□□□□□ -1.02
SMCR8-201ENST00000406438 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
SMCR8-201ENST00000406438 CRIP2P52943 208 aaPredicted RBP8.67□□□□□ -1.02
SMCR8-201ENST00000406438 LINC00242Q5T6M2 205 aa8.67□□□□□ -1.02
SMCR8-201ENST00000406438 SPINK1P00995 79 aa8.67□□□□□ -1.02
SMCR8-201ENST00000406438 C1orf134Q5TEV5 83 aa8.67□□□□□ -1.02
SMCR8-201ENST00000406438 H0Y9P7 68 aa8.67□□□□□ -1.02
SMCR8-201ENST00000406438 PRR3P79522 188 aaKnown RBP8.67□□□□□ -1.02
SMCR8-201ENST00000406438 LINC00575Q6W349 94 aa8.67□□□□□ -1.02
SMCR8-201ENST00000406438 LINC00337Q8N6G1 96 aa8.67□□□□□ -1.02
SMCR8-201ENST00000406438 SBSPONQ8IVN8 264 aa8.67□□□□□ -1.02
SMCR8-201ENST00000406438 C2orf48Q96LS8 159 aa8.67□□□□□ -1.02
SMCR8-201ENST00000406438 CSDC2Q9Y534 153 aaKnown RBP8.67□□□□□ -1.02
SMCR8-201ENST00000406438 USP9YO00507 2555 aaPredicted RBP8.66□□□□□ -1.02
SMCR8-201ENST00000406438 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
SMCR8-201ENST00000406438 A0A087WYN8 130 aa8.66□□□□□ -1.02
SMCR8-201ENST00000406438 SMR3AQ99954 134 aa8.65□□□□□ -1.02
SMCR8-201ENST00000406438 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
SMCR8-201ENST00000406438 IGLV1-51P01701 117 aa8.65□□□□□ -1.02
SMCR8-201ENST00000406438 Q6ZTC4 211 aa8.65□□□□□ -1.03
SMCR8-201ENST00000406438 XGP55808 180 aa8.64□□□□□ -1.03
SMCR8-201ENST00000406438 BRI3O95415 125 aa8.64□□□□□ -1.03
SMCR8-201ENST00000406438 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
SMCR8-201ENST00000406438 FHL2Q14192 279 aa8.63□□□□□ -1.03
SMCR8-201ENST00000406438 ODF3L2Q3SX64 289 aa8.62□□□□□ -1.03
SMCR8-201ENST00000406438 PCOTHQ58A44 107 aa8.62□□□□□ -1.03
SMCR8-201ENST00000406438 Q8N3U1 123 aa8.62□□□□□ -1.03
SMCR8-201ENST00000406438 IGLV4-60A0A075B6I1 120 aa8.62□□□□□ -1.03
SMCR8-201ENST00000406438 TRBV7-7A0A0K0K1E9 115 aa8.62□□□□□ -1.03
SMCR8-201ENST00000406438 USP24Q9UPU5 2620 aa8.62□□□□□ -1.03
SMCR8-201ENST00000406438 SOSTDC1Q6X4U4 206 aa8.62□□□□□ -1.03
SMCR8-201ENST00000406438 MTORP42345 2549 aa8.61□□□□□ -1.03
SMCR8-201ENST00000406438 FLG2Q5D862 2391 aaPredicted RBP8.61□□□□□ -1.03
SMCR8-201ENST00000406438 C7orf65Q6ZTY9 151 aa8.61□□□□□ -1.03
SMCR8-201ENST00000406438 HCG22E2RYF7 251 aa8.61□□□□□ -1.03
SMCR8-201ENST00000406438 PSPHP1O15172 72 aa8.61□□□□□ -1.03
SMCR8-201ENST00000406438 NHLRC4P0CG21 123 aaPredicted RBP8.61□□□□□ -1.03
SMCR8-201ENST00000406438 C16orf95Q9H693 158 aa8.6□□□□□ -1.03
SMCR8-201ENST00000406438 CRYGAP11844 174 aa8.6□□□□□ -1.03
SMCR8-201ENST00000406438 EDN2P20800 178 aa8.59□□□□□ -1.03
SMCR8-201ENST00000406438 A0A087WSZ3 146 aa8.59□□□□□ -1.04
SMCR8-201ENST00000406438 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.04
SMCR8-201ENST00000406438 POLQO75417 2590 aa8.59□□□□□ -1.04
SMCR8-201ENST00000406438 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
SMCR8-201ENST00000406438 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
SMCR8-201ENST00000406438 AMELXQ99217 191 aa8.58□□□□□ -1.04
SMCR8-201ENST00000406438 IGKV2D-30A0A075B6S6 120 aa8.58□□□□□ -1.04
SMCR8-201ENST00000406438 IGKV2-30P06310 120 aa8.58□□□□□ -1.04
SMCR8-201ENST00000406438 BEAN1Q3B7T3 259 aa8.57□□□□□ -1.04
SMCR8-201ENST00000406438 AVPP01185 164 aa8.57□□□□□ -1.04
SMCR8-201ENST00000406438 VPREB1P12018 145 aa8.57□□□□□ -1.04
SMCR8-201ENST00000406438 ADAMTSL4-AS1Q5T5F5 129 aa8.57□□□□□ -1.04
SMCR8-201ENST00000406438 LYPD5Q6UWN5 251 aa8.57□□□□□ -1.04
SMCR8-201ENST00000406438 CXCL6P80162 114 aa8.57□□□□□ -1.04
SMCR8-201ENST00000406438 CDSNQ15517 529 aa8.56□□□□□ -1.04
SMCR8-201ENST00000406438 PRLHP81277 87 aa8.55□□□□□ -1.04
SMCR8-201ENST00000406438 CHD8Q9HCK8 2581 aa8.55□□□□□ -1.04
SMCR8-201ENST00000406438 Q8N2B8 174 aa8.55□□□□□ -1.04
SMCR8-201ENST00000406438 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
SMCR8-201ENST00000406438 PRO0628Q9UI54 55 aa8.53□□□□□ -1.04
SMCR8-201ENST00000406438 DNAH12Q6ZR08 3092 aa8.53□□□□□ -1.04
SMCR8-201ENST00000406438 A0A087WVE0 104 aa8.53□□□□□ -1.04
SMCR8-201ENST00000406438 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
SMCR8-201ENST00000406438 A8MTW9 85 aa8.52□□□□□ -1.04
SMCR8-201ENST00000406438 C1orf64Q8NEQ6 169 aa8.52□□□□□ -1.04
SMCR8-201ENST00000406438 ZNF580Q9UK33 172 aa8.52□□□□□ -1.05
SMCR8-201ENST00000406438 TP53AIP1Q9HCN2 124 aa8.51□□□□□ -1.05
SMCR8-201ENST00000406438 FASNP49327 2511 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms