RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 PRSS2P07478 247 aa11.23□□□□□ -0.61
IRF1-202ENST00000405885 NPC2P61916 151 aa11.23□□□□□ -0.61
IRF1-202ENST00000405885 Q8IZM0 81 aa11.23□□□□□ -0.61
IRF1-202ENST00000405885 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
IRF1-202ENST00000405885 LINC01561Q8N1V8 128 aa11.23□□□□□ -0.61
IRF1-202ENST00000405885 HIGD2BQ4VC39 106 aa11.22□□□□□ -0.61
IRF1-202ENST00000405885 PTTG1IPP53801 180 aa11.21□□□□□ -0.61
IRF1-202ENST00000405885 SPAG11BQ08648 103 aa11.21□□□□□ -0.61
IRF1-202ENST00000405885 SMIM13P0DJ93 91 aa11.21□□□□□ -0.62
IRF1-202ENST00000405885 MEIG1Q5JSS6 88 aa11.21□□□□□ -0.62
IRF1-202ENST00000405885 Q6ZVH6 145 aa11.21□□□□□ -0.62
IRF1-202ENST00000405885 C15orf56Q8N910 161 aa11.21□□□□□ -0.62
IRF1-202ENST00000405885 TM2D2Q9BX73 214 aa11.21□□□□□ -0.62
IRF1-202ENST00000405885 SPANXB1Q9NS25 103 aaPredicted RBP11.21□□□□□ -0.62
IRF1-202ENST00000405885 DNAH2Q9P225 4427 aa11.2□□□□□ -0.62
IRF1-202ENST00000405885 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
IRF1-202ENST00000405885 WWC2-AS2Q96NR7 200 aa11.2□□□□□ -0.62
IRF1-202ENST00000405885 CBY1Q9Y3M2 126 aa11.2□□□□□ -0.62
IRF1-202ENST00000405885 TMEM238C9JI98 176 aa11.2□□□□□ -0.62
IRF1-202ENST00000405885 CKS1BP61024 79 aa11.2□□□□□ -0.62
IRF1-202ENST00000405885 K7ERJ3 54 aa11.19□□□□□ -0.62
IRF1-202ENST00000405885 APOMO95445 188 aa11.19□□□□□ -0.62
IRF1-202ENST00000405885 C9orf116Q5BN46 136 aaPredicted RBP11.19□□□□□ -0.62
IRF1-202ENST00000405885 CFAP161Q6P656 301 aa11.19□□□□□ -0.62
IRF1-202ENST00000405885 PFN2P35080 140 aa11.18□□□□□ -0.62
IRF1-202ENST00000405885 TAL2Q16559 108 aa11.18□□□□□ -0.62
IRF1-202ENST00000405885 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
IRF1-202ENST00000405885 MUSTN1Q8IVN3 82 aa11.18□□□□□ -0.62
IRF1-202ENST00000405885 LECT2O14960 151 aa11.18□□□□□ -0.62
IRF1-202ENST00000405885 HERV-K104P63124 156 aa11.18□□□□□ -0.62
IRF1-202ENST00000405885 TAX1BP3O14907 124 aa11.17□□□□□ -0.62
IRF1-202ENST00000405885 M0R2N4 97 aa11.16□□□□□ -0.62
IRF1-202ENST00000405885 NHP2Q9NX24 153 aaKnown RBP11.16□□□□□ -0.62
IRF1-202ENST00000405885 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
IRF1-202ENST00000405885 CIRBPQ14011 172 aaKnown RBP11.15□□□□□ -0.62
IRF1-202ENST00000405885 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
IRF1-202ENST00000405885 SPANXCQ9NY87 97 aa11.15□□□□□ -0.62
IRF1-202ENST00000405885 TIMM17BO60830 172 aa11.15□□□□□ -0.63
IRF1-202ENST00000405885 SOSTDC1Q6X4U4 206 aa11.15□□□□□ -0.63
IRF1-202ENST00000405885 ERG28Q9UKR5 140 aa11.15□□□□□ -0.63
IRF1-202ENST00000405885 LINC00158P58513 81 aa11.14□□□□□ -0.63
IRF1-202ENST00000405885 MIR7-3HGQ8N6C7 128 aa11.14□□□□□ -0.63
IRF1-202ENST00000405885 NTN5Q8WTR8 489 aaPredicted RBP11.14□□□□□ -0.63
IRF1-202ENST00000405885 A4D1N5 150 aa11.13□□□□□ -0.63
IRF1-202ENST00000405885 ZNF561-AS1K7EIQ3 104 aa11.13□□□□□ -0.63
IRF1-202ENST00000405885 RAB37Q96AX2 223 aa11.13□□□□□ -0.63
IRF1-202ENST00000405885 HYDINQ4G0P3 5121 aa11.13□□□□□ -0.63
IRF1-202ENST00000405885 WFDC2Q14508 124 aa11.13□□□□□ -0.63
IRF1-202ENST00000405885 USP17L23D6RBM5 183 aa11.12□□□□□ -0.63
IRF1-202ENST00000405885 LINC00308Q8TCZ7 52 aa11.12□□□□□ -0.63
IRF1-202ENST00000405885 CXCL5P42830 114 aa11.12□□□□□ -0.63
IRF1-202ENST00000405885 RMI2Q96E14 147 aa11.12□□□□□ -0.63
IRF1-202ENST00000405885 A6NDN8 102 aa11.11□□□□□ -0.63
IRF1-202ENST00000405885 NAA38Q9BRA0 125 aaKnown RBP11.11□□□□□ -0.63
IRF1-202ENST00000405885 C6orf48Q9UBA6 75 aa11.11□□□□□ -0.63
IRF1-202ENST00000405885 GVQW2A0A096LPI5 108 aaPredicted RBP11.1□□□□□ -0.63
IRF1-202ENST00000405885 VAMP3Q15836 100 aa11.1□□□□□ -0.63
IRF1-202ENST00000405885 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
IRF1-202ENST00000405885 LY6G6CO95867 125 aa11.1□□□□□ -0.63
IRF1-202ENST00000405885 CFC1BP0CG36 223 aa11.1□□□□□ -0.63
IRF1-202ENST00000405885 CFC1P0CG37 223 aa11.1□□□□□ -0.63
IRF1-202ENST00000405885 SFTA2Q6UW10 78 aa11.1□□□□□ -0.63
IRF1-202ENST00000405885 Q6ZRU5 148 aa11.1□□□□□ -0.63
IRF1-202ENST00000405885 SLPIP03973 132 aa11.09□□□□□ -0.63
IRF1-202ENST00000405885 PSCAO43653 123 aa11.08□□□□□ -0.64
IRF1-202ENST00000405885 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.64
IRF1-202ENST00000405885 TTC32Q5I0X7 151 aa11.07□□□□□ -0.64
IRF1-202ENST00000405885 TMEM238LA0A1B0GVL6 79 aa11.07□□□□□ -0.64
IRF1-202ENST00000405885 A6NJY4 79 aa11.07□□□□□ -0.64
IRF1-202ENST00000405885 A0A1B0GWB2 263 aa11.06□□□□□ -0.64
IRF1-202ENST00000405885 ALMS1Q8TCU4 4167 aa11.06□□□□□ -0.64
IRF1-202ENST00000405885 IFITM1P13164 125 aa11.05□□□□□ -0.64
IRF1-202ENST00000405885 Q6ZRN7 208 aaPredicted RBP11.05□□□□□ -0.64
IRF1-202ENST00000405885 LINC00476Q8WZB0 136 aa11.04□□□□□ -0.64
IRF1-202ENST00000405885 C2orf48Q96LS8 159 aa11.04□□□□□ -0.64
IRF1-202ENST00000405885 COX17Q14061 63 aa11.04□□□□□ -0.64
IRF1-202ENST00000405885 SYCNQ0VAF6 134 aa11.03□□□□□ -0.64
IRF1-202ENST00000405885 SND1-IT1Q9HBX3 110 aa11.03□□□□□ -0.64
IRF1-202ENST00000405885 C3orf84H3BNL1 204 aa11.02□□□□□ -0.64
IRF1-202ENST00000405885 Q6ZR54 194 aa11.02□□□□□ -0.64
IRF1-202ENST00000405885 H3BUT2 72 aa11.02□□□□□ -0.65
IRF1-202ENST00000405885 PCP4P48539 62 aa11.02□□□□□ -0.65
IRF1-202ENST00000405885 Q8NDZ9 215 aa11.02□□□□□ -0.65
IRF1-202ENST00000405885 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
IRF1-202ENST00000405885 DNAH6Q9C0G6 4158 aa11.01□□□□□ -0.65
IRF1-202ENST00000405885 TRBV30A0A0K0K1B3 111 aa11.01□□□□□ -0.65
IRF1-202ENST00000405885 H7C2G1 150 aa11.01□□□□□ -0.65
IRF1-202ENST00000405885 C9orf118A6NHY6 69 aa11□□□□□ -0.65
IRF1-202ENST00000405885 PRR3P79522 188 aaKnown RBP11□□□□□ -0.65
IRF1-202ENST00000405885 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
IRF1-202ENST00000405885 SACSQ9NZJ4 4579 aa11□□□□□ -0.65
IRF1-202ENST00000405885 CARD19Q96LW7 228 aa11□□□□□ -0.65
IRF1-202ENST00000405885 FRAS1Q86XX4 4008 aa10.99□□□□□ -0.65
IRF1-202ENST00000405885 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
IRF1-202ENST00000405885 IGKV2-28A0A075B6P5 120 aa10.99□□□□□ -0.65
IRF1-202ENST00000405885 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.99□□□□□ -0.65
IRF1-202ENST00000405885 IGKV2D-28P01615 120 aa10.99□□□□□ -0.65
IRF1-202ENST00000405885 PRO1854Q9UHT4 67 aa10.99□□□□□ -0.65
IRF1-202ENST00000405885 HECTD4Q9Y4D8 3996 aa10.99□□□□□ -0.65
IRF1-202ENST00000405885 A0A0B4J2C4 111 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms