RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 LY6G6CO95867 125 aa2.48□□□□□ -2.01
RTN4-208ENST00000404909 NPC2P61916 151 aa2.48□□□□□ -2.01
RTN4-208ENST00000404909 SPAG11BQ08648 103 aa2.48□□□□□ -2.01
RTN4-208ENST00000404909 CASC10Q5T4H9 136 aa2.48□□□□□ -2.01
RTN4-208ENST00000404909 C6orf223Q8N319 242 aa2.48□□□□□ -2.01
RTN4-208ENST00000404909 DAND5Q8N907 189 aa2.48□□□□□ -2.01
RTN4-208ENST00000404909 M0R143 59 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 SNHG12Q9BXW3 62 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 HIGD1BQ9P298 99 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 NBDYA0A0U1RRE5 68 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 ZNF561-AS1K7EIQ3 104 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 PFN2P35080 140 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 PTTG1IPP53801 180 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 HSD52Q0P140 79 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 KRTAP26-1Q6PEX3 210 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 Q8IZM0 81 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 RMI2Q96E14 147 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 TMEM238C9JI98 176 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 SMIM13P0DJ93 91 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 CIRBPQ14011 172 aaKnown RBP2.47□□□□□ -2.01
RTN4-208ENST00000404909 BVES-AS1Q5T3Y7 98 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 ADAMTSL4-AS1Q5T5F5 129 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 LINC01561Q8N1V8 128 aa2.47□□□□□ -2.01
RTN4-208ENST00000404909 LINC00158P58513 81 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 HERV-K104P63124 156 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 KIAA0087Q14695 138 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 C9orf116Q5BN46 136 aaPredicted RBP2.46□□□□□ -2.02
RTN4-208ENST00000404909 TTC32Q5I0X7 151 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 UNQ6190/PRO20217Q6UXQ8 127 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 PGPEP1Q9NXJ5 209 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 PCP4P48539 62 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 FXYD2P54710 66 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 CEND1Q8N111 149 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 C15orf56Q8N910 161 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 USP17L23D6RBM5 183 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 C10orf25Q5T742 122 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 CAMK2N2Q96S95 79 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 LITAFQ99732 161 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 TM2D2Q9BX73 214 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 DNAH2Q9P225 4427 aa2.46□□□□□ -2.02
RTN4-208ENST00000404909 C3orf84H3BNL1 204 aa2.45□□□□□ -2.02
RTN4-208ENST00000404909 CXCL5P42830 114 aa2.45□□□□□ -2.02
RTN4-208ENST00000404909 MUSTN1Q8IVN3 82 aa2.45□□□□□ -2.02
RTN4-208ENST00000404909 ERG28Q9UKR5 140 aa2.45□□□□□ -2.02
RTN4-208ENST00000404909 COX11Q9Y6N1 276 aa2.45□□□□□ -2.02
RTN4-208ENST00000404909 MIR7-3HGQ8N6C7 128 aa2.45□□□□□ -2.02
RTN4-208ENST00000404909 SPANXB1Q9NS25 103 aaPredicted RBP2.45□□□□□ -2.02
RTN4-208ENST00000404909 NHP2Q9NX24 153 aaKnown RBP2.45□□□□□ -2.02
RTN4-208ENST00000404909 K7ERJ3 54 aa2.45□□□□□ -2.02
RTN4-208ENST00000404909 EIF4EBP3O60516 100 aaPredicted RBP2.45□□□□□ -2.02
RTN4-208ENST00000404909 TAL2Q16559 108 aa2.45□□□□□ -2.02
RTN4-208ENST00000404909 SFTA2Q6UW10 78 aa2.45□□□□□ -2.02
RTN4-208ENST00000404909 NTN5Q8WTR8 489 aaPredicted RBP2.45□□□□□ -2.02
RTN4-208ENST00000404909 SCGB1A1P11684 91 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 WFDC2Q14508 124 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 Q6ZRU5 148 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 LINC00476Q8WZB0 136 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 RAB37Q96AX2 223 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 GVQW2A0A096LPI5 108 aaPredicted RBP2.44□□□□□ -2.02
RTN4-208ENST00000404909 A4D1N5 150 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 A6NDN8 102 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 TIMM17BO60830 172 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 RPL24P83731 157 aaKnown RBP2.44□□□□□ -2.02
RTN4-208ENST00000404909 COL5A1-AS1Q5SY13 56 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 LINC00308Q8TCZ7 52 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 C6orf48Q9UBA6 75 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.44□□□□□ -2.02
RTN4-208ENST00000404909 SYCNQ0VAF6 134 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 Q6ZVH6 145 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 SPANXDQ9BXN6 97 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 SPANXCQ9NY87 97 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 HYDINQ4G0P3 5121 aa2.44□□□□□ -2.02
RTN4-208ENST00000404909 H7C2G1 150 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 SLPIP03973 132 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 GAGE2EQ4V326 116 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 SOSTDC1Q6X4U4 206 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 C2orf48Q96LS8 159 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 CARD19Q96LW7 228 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 NAA38Q9BRA0 125 aaKnown RBP2.43□□□□□ -2.02
RTN4-208ENST00000404909 XAGE1AQ9HD64 81 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 GAGE2DQ9UEU5 116 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 ALMS1Q8TCU4 4167 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 A0A1B0GV90 55 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 IFITM1P13164 125 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 COX17Q14061 63 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 SACSQ9NZJ4 4579 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 TRBV30A0A0K0K1B3 111 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 CFC1BP0CG36 223 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 CFC1P0CG37 223 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 RPL18AQ02543 176 aaKnown RBP2.43□□□□□ -2.02
RTN4-208ENST00000404909 C1orf134Q5TEV5 83 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 Q6ZR54 194 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 COPS9Q8WXC6 57 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 SND1-IT1Q9HBX3 110 aa2.43□□□□□ -2.02
RTN4-208ENST00000404909 Q6ZRN7 208 aaPredicted RBP2.42□□□□□ -2.02
RTN4-208ENST00000404909 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.42□□□□□ -2.02
RTN4-208ENST00000404909 TAX1BP3O14907 124 aa2.42□□□□□ -2.02
RTN4-208ENST00000404909 PRR3P79522 188 aaKnown RBP2.42□□□□□ -2.02
RTN4-208ENST00000404909 NDUFC2-KCTD14E9PQ53 114 aa2.42□□□□□ -2.02
RTN4-208ENST00000404909 H3BUT2 72 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms