RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 CST9LQ9H4G1 147 aa11.31□□□□□ -0.6
PTPRN2-204ENST00000404321 PKHD1L1Q86WI1 4243 aa11.31□□□□□ -0.6
PTPRN2-204ENST00000404321 FAM168BA1KXE4 195 aa11.3□□□□□ -0.6
PTPRN2-204ENST00000404321 CKS1BP61024 79 aa11.3□□□□□ -0.6
PTPRN2-204ENST00000404321 C6orf226Q5I0X4 101 aa11.3□□□□□ -0.6
PTPRN2-204ENST00000404321 A0A096LNJ9 63 aa11.29□□□□□ -0.6
PTPRN2-204ENST00000404321 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
PTPRN2-204ENST00000404321 LINC00614P0C842 121 aa11.29□□□□□ -0.6
PTPRN2-204ENST00000404321 PHF5AQ7RTV0 110 aaKnown RBP11.29□□□□□ -0.6
PTPRN2-204ENST00000404321 CBLN2Q8IUK8 224 aa11.29□□□□□ -0.6
PTPRN2-204ENST00000404321 YPEL4Q96NS1 127 aa11.29□□□□□ -0.6
PTPRN2-204ENST00000404321 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
PTPRN2-204ENST00000404321 TLX1NBP0CAT3 122 aa11.28□□□□□ -0.6
PTPRN2-204ENST00000404321 PMVKQ15126 192 aa11.28□□□□□ -0.6
PTPRN2-204ENST00000404321 Q8IZM0 81 aa11.28□□□□□ -0.6
PTPRN2-204ENST00000404321 TINCRA0A1B0GVN0 87 aa11.28□□□□□ -0.6
PTPRN2-204ENST00000404321 NDUFA6P56556 154 aa11.28□□□□□ -0.6
PTPRN2-204ENST00000404321 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
PTPRN2-204ENST00000404321 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.61
PTPRN2-204ENST00000404321 NDUFC2-KCTD14E9PQ53 114 aa11.26□□□□□ -0.61
PTPRN2-204ENST00000404321 HBDP02042 147 aa11.26□□□□□ -0.61
PTPRN2-204ENST00000404321 SPINK8P0C7L1 97 aa11.25□□□□□ -0.61
PTPRN2-204ENST00000404321 IGLV5-45A0A087WSX0 123 aa11.24□□□□□ -0.61
PTPRN2-204ENST00000404321 RAB5BP61020 215 aa11.23□□□□□ -0.61
PTPRN2-204ENST00000404321 C9orf129Q5T035 196 aaKnown RBP11.23□□□□□ -0.61
PTPRN2-204ENST00000404321 KRTAP7-1Q8IUC3 87 aa11.23□□□□□ -0.61
PTPRN2-204ENST00000404321 COX7B2Q8TF08 81 aa11.23□□□□□ -0.61
PTPRN2-204ENST00000404321 PSORS1C2Q9UIG4 136 aa11.23□□□□□ -0.61
PTPRN2-204ENST00000404321 F8VRH5 84 aa11.22□□□□□ -0.61
PTPRN2-204ENST00000404321 PDZD11Q5EBL8 140 aa11.22□□□□□ -0.61
PTPRN2-204ENST00000404321 TMA7Q9Y2S6 64 aaKnown RBP11.22□□□□□ -0.61
PTPRN2-204ENST00000404321 KRTAP11-1Q8IUC1 163 aa11.21□□□□□ -0.61
PTPRN2-204ENST00000404321 M0QXV9 152 aa11.2□□□□□ -0.62
PTPRN2-204ENST00000404321 MT1HL1P0DM35 61 aa11.2□□□□□ -0.62
PTPRN2-204ENST00000404321 IGLC3P0DOY3 106 aa11.2□□□□□ -0.62
PTPRN2-204ENST00000404321 XAGE1AQ9HD64 81 aa11.2□□□□□ -0.62
PTPRN2-204ENST00000404321 H3BRM9 83 aa11.19□□□□□ -0.62
PTPRN2-204ENST00000404321 C1orf137Q5JT78 98 aa11.19□□□□□ -0.62
PTPRN2-204ENST00000404321 BAGE3Q86Y29 109 aa11.19□□□□□ -0.62
PTPRN2-204ENST00000404321 ATP5LO75964 103 aa11.18□□□□□ -0.62
PTPRN2-204ENST00000404321 CXCL5P42830 114 aa11.18□□□□□ -0.62
PTPRN2-204ENST00000404321 SPINK6Q6UWN8 80 aa11.18□□□□□ -0.62
PTPRN2-204ENST00000404321 ZNF22P17026 224 aaPredicted RBP11.17□□□□□ -0.62
PTPRN2-204ENST00000404321 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTPRN2-204ENST00000404321 TRGC2P03986 189 aa11.16□□□□□ -0.62
PTPRN2-204ENST00000404321 SERTAD4-AS1Q5TG53 156 aa11.16□□□□□ -0.62
PTPRN2-204ENST00000404321 CHCHD1Q96BP2 118 aaKnown RBP11.16□□□□□ -0.62
PTPRN2-204ENST00000404321 UBE2BP63146 152 aa11.16□□□□□ -0.62
PTPRN2-204ENST00000404321 C11orf86A6NJI1 115 aa11.15□□□□□ -0.63
PTPRN2-204ENST00000404321 SCO1O75880 301 aa11.15□□□□□ -0.63
PTPRN2-204ENST00000404321 HMCN2Q8NDA2 5059 aa11.14□□□□□ -0.63
PTPRN2-204ENST00000404321 TMEM170BQ5T4T1 132 aa11.13□□□□□ -0.63
PTPRN2-204ENST00000404321 FAM19A2Q8N3H0 131 aa11.13□□□□□ -0.63
PTPRN2-204ENST00000404321 IFI27L1Q96BM0 104 aa11.13□□□□□ -0.63
PTPRN2-204ENST00000404321 CHTOPQ9Y3Y2 248 aaKnown RBP11.13□□□□□ -0.63
PTPRN2-204ENST00000404321 IGLV5-39A0A0G2JS06 123 aa11.12□□□□□ -0.63
PTPRN2-204ENST00000404321 LOC105371267A0A1B0GV96 52 aa11.12□□□□□ -0.63
PTPRN2-204ENST00000404321 HSBP1O75506 76 aa11.12□□□□□ -0.63
PTPRN2-204ENST00000404321 IGLV7-43P04211 117 aa11.12□□□□□ -0.63
PTPRN2-204ENST00000404321 REG3GQ6UW15 175 aa11.12□□□□□ -0.63
PTPRN2-204ENST00000404321 LINC01600Q96MT4 127 aa11.12□□□□□ -0.63
PTPRN2-204ENST00000404321 C22orf24Q9Y442 160 aa11.11□□□□□ -0.63
PTPRN2-204ENST00000404321 PFN2P35080 140 aa11.09□□□□□ -0.63
PTPRN2-204ENST00000404321 ODF1Q14990 250 aa11.09□□□□□ -0.63
PTPRN2-204ENST00000404321 COLCA2A8K830 154 aa11.08□□□□□ -0.64
PTPRN2-204ENST00000404321 SERF1AO75920 110 aa11.08□□□□□ -0.64
PTPRN2-204ENST00000404321 ZNF625Q96I27 306 aaPredicted RBP11.08□□□□□ -0.64
PTPRN2-204ENST00000404321 H0Y8G0 127 aa11.07□□□□□ -0.64
PTPRN2-204ENST00000404321 LINC00310P59036 64 aa11.07□□□□□ -0.64
PTPRN2-204ENST00000404321 TRAV12-1A0A0B4J245 112 aa11.06□□□□□ -0.64
PTPRN2-204ENST00000404321 LBHQ53QV2 105 aaPredicted RBP11.05□□□□□ -0.64
PTPRN2-204ENST00000404321 GAGE10A6NGK3 116 aa11.04□□□□□ -0.64
PTPRN2-204ENST00000404321 NUPR1O60356 82 aa11.04□□□□□ -0.64
PTPRN2-204ENST00000404321 MRPL55Q7Z7F7 128 aaKnown RBP11.04□□□□□ -0.64
PTPRN2-204ENST00000404321 DIRC1Q969H9 104 aa11.04□□□□□ -0.64
PTPRN2-204ENST00000404321 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
PTPRN2-204ENST00000404321 PLA2G2DQ9UNK4 145 aa11.04□□□□□ -0.64
PTPRN2-204ENST00000404321 TNXBP22105 4242 aa11.04□□□□□ -0.64
PTPRN2-204ENST00000404321 TMEM223A0PJW6 202 aa11.03□□□□□ -0.64
PTPRN2-204ENST00000404321 RPL37AP8A6NKH3 93 aa11.03□□□□□ -0.64
PTPRN2-204ENST00000404321 LEPROTL1O95214 131 aa11.03□□□□□ -0.64
PTPRN2-204ENST00000404321 H0Y9J4 135 aa11.02□□□□□ -0.65
PTPRN2-204ENST00000404321 FABP4P15090 132 aa11.02□□□□□ -0.65
PTPRN2-204ENST00000404321 KRTAP10-8P60410 259 aa11.02□□□□□ -0.65
PTPRN2-204ENST00000404321 LINC00167Q96N53 147 aa11.02□□□□□ -0.65
PTPRN2-204ENST00000404321 TP73-AS1Q9UF72 201 aa11.02□□□□□ -0.65
PTPRN2-204ENST00000404321 SND1-IT1Q9HBX3 110 aa11.01□□□□□ -0.65
PTPRN2-204ENST00000404321 NKAPP1Q8N9T2 125 aa11□□□□□ -0.65
PTPRN2-204ENST00000404321 A0A0U1RRA0 63 aa10.99□□□□□ -0.65
PTPRN2-204ENST00000404321 IGLV5-37A0A075B6J1 123 aa10.97□□□□□ -0.65
PTPRN2-204ENST00000404321 LINC00158P58513 81 aa10.97□□□□□ -0.65
PTPRN2-204ENST00000404321 COX17Q14061 63 aa10.97□□□□□ -0.65
PTPRN2-204ENST00000404321 SFTA2Q6UW10 78 aa10.97□□□□□ -0.65
PTPRN2-204ENST00000404321 PRR26Q8N8Z3 221 aa10.97□□□□□ -0.65
PTPRN2-204ENST00000404321 PMCHL2Q9BQD1 86 aa10.97□□□□□ -0.65
PTPRN2-204ENST00000404321 HSPB8Q9UJY1 196 aa10.96□□□□□ -0.65
PTPRN2-204ENST00000404321 IGKV2-28A0A075B6P5 120 aa10.95□□□□□ -0.66
PTPRN2-204ENST00000404321 ZNF861PO60384 105 aa10.95□□□□□ -0.66
PTPRN2-204ENST00000404321 BCE1O60756 84 aa10.95□□□□□ -0.66
PTPRN2-204ENST00000404321 IGKV2D-28P01615 120 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms