RNA–Protein interactions for RNA: ENST00000404291.3

STAG3L1-201, Transcript of stromal antigen 3-like 1 (pseudogene), humanhuman

TSL 3 BASIC

Gene STAG3L1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3L1-201ENST00000404291 CSDC2Q9Y534 153 aaKnown RBP5.35□□□□□ -1.55
STAG3L1-201ENST00000404291 TSPEAR-AS2P59090 65 aa5.34□□□□□ -1.55
STAG3L1-201ENST00000404291 NTM-AS1Q6ZSK4 140 aa5.34□□□□□ -1.55
STAG3L1-201ENST00000404291 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.55
STAG3L1-201ENST00000404291 HIST1H4GQ99525 98 aa5.34□□□□□ -1.55
STAG3L1-201ENST00000404291 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
STAG3L1-201ENST00000404291 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.33□□□□□ -1.56
STAG3L1-201ENST00000404291 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
STAG3L1-201ENST00000404291 A0A1W2PPM0 123 aa5.33□□□□□ -1.56
STAG3L1-201ENST00000404291 IGKV2-29A2NJV5 120 aaPredicted RBP5.33□□□□□ -1.56
STAG3L1-201ENST00000404291 H3BUT2 72 aa5.33□□□□□ -1.56
STAG3L1-201ENST00000404291 UBE2D1P51668 147 aa5.33□□□□□ -1.56
STAG3L1-201ENST00000404291 LELP1Q5T871 98 aa5.33□□□□□ -1.56
STAG3L1-201ENST00000404291 GAGE10A6NGK3 116 aa5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 H7C423 109 aa5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 LINC00694P0DN24 101 aa5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 LGALS3P17931 250 aaKnown RBP5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 SMAGPQ0VAQ4 97 aa5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 SERTAD4-AS1Q5TG53 156 aa5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 SCGB1D4Q6XE38 83 aa5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 Q6ZUT4 128 aa5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 GTF2H5Q6ZYL4 71 aa5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 NHP2Q9NX24 153 aaKnown RBP5.32□□□□□ -1.56
STAG3L1-201ENST00000404291 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 IGHV1-58A0A0C4DH39 117 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 GAGE12JA6NER3 117 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 K7EP34 96 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 LECT2O14960 151 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 GAGE4Q13068 117 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 GAGE5Q13069 117 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 GAGE13Q4V321 117 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 SCXQ7RTU7 201 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 Q8N3U1 123 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 ATP6V0E2Q8NHE4 81 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 RAB37Q96AX2 223 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 UBR4Q5T4S7 5183 aa5.31□□□□□ -1.56
STAG3L1-201ENST00000404291 TRAV8-3A0A0A6YYJ7 113 aa5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 TMEM238LA0A1B0GVL6 79 aa5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 A6NJY4 79 aa5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 K7ERJ3 54 aa5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 FABP2P12104 132 aa5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 KRTAP10-4P60372 401 aaPredicted RBP5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 SRSF9Q13242 221 aaKnown RBP eCLIP5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 LINC01620Q4KN68 170 aa5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 DGAT2L7PQ6IED9 249 aa5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 TMEM243Q9BU79 118 aa5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 CDC42SE2Q9NRR3 84 aa5.3□□□□□ -1.56
STAG3L1-201ENST00000404291 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
STAG3L1-201ENST00000404291 A0A0J9YXY3 114 aa5.29□□□□□ -1.56
STAG3L1-201ENST00000404291 RNASE13Q5GAN3 156 aaKnown RBP5.29□□□□□ -1.56
STAG3L1-201ENST00000404291 LINC00242Q5T6M2 205 aa5.29□□□□□ -1.56
STAG3L1-201ENST00000404291 NAA38Q9BRA0 125 aaKnown RBP5.29□□□□□ -1.56
STAG3L1-201ENST00000404291 GEMIN7Q9H840 131 aaKnown RBP5.29□□□□□ -1.56
STAG3L1-201ENST00000404291 IGLV5-39A0A0G2JS06 123 aa5.28□□□□□ -1.56
STAG3L1-201ENST00000404291 TIMM17BO60830 172 aa5.28□□□□□ -1.56
STAG3L1-201ENST00000404291 OXTP01178 125 aa5.28□□□□□ -1.56
STAG3L1-201ENST00000404291 HERVK_113P63121 156 aa5.28□□□□□ -1.56
STAG3L1-201ENST00000404291 COX6A2Q02221 97 aa5.28□□□□□ -1.56
STAG3L1-201ENST00000404291 TMEM101Q96IK0 257 aa5.28□□□□□ -1.56
STAG3L1-201ENST00000404291 LITAFQ99732 161 aa5.28□□□□□ -1.56
STAG3L1-201ENST00000404291 CDKN2A-AS1Q9UH64 79 aa5.28□□□□□ -1.56
STAG3L1-201ENST00000404291 SPCS1Q9Y6A9 102 aa5.28□□□□□ -1.56
STAG3L1-201ENST00000404291 IGHV3-64A0A075B6Q5 118 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 TRBV6-8A0A0A6YYG3 113 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 TMEM238C9JI98 176 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 CFC1BP0CG36 223 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 CFC1P0CG37 223 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 CIRBP-AS1Q8TBR5 109 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 SPANXDQ9BXN6 97 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 SPANXCQ9NY87 97 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 NDUFA12Q9UI09 145 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 PLA2G2DQ9UNK4 145 aa5.27□□□□□ -1.57
STAG3L1-201ENST00000404291 NDUFA1O15239 70 aa5.26□□□□□ -1.57
STAG3L1-201ENST00000404291 SPINK8P0C7L1 97 aa5.26□□□□□ -1.57
STAG3L1-201ENST00000404291 RMI2Q96E14 147 aa5.26□□□□□ -1.57
STAG3L1-201ENST00000404291 FAT3Q8TDW7 4589 aa5.26□□□□□ -1.57
STAG3L1-201ENST00000404291 IGKV2D-24A0A075B6R9 120 aa5.25□□□□□ -1.57
STAG3L1-201ENST00000404291 A0A0B4J2C4 111 aa5.25□□□□□ -1.57
STAG3L1-201ENST00000404291 SMIM1B2RUZ4 78 aa5.25□□□□□ -1.57
STAG3L1-201ENST00000404291 UBE2L6O14933 153 aa5.25□□□□□ -1.57
STAG3L1-201ENST00000404291 EIF4EBP3O60516 100 aaPredicted RBP5.25□□□□□ -1.57
STAG3L1-201ENST00000404291 RPL24P83731 157 aaKnown RBP5.25□□□□□ -1.57
STAG3L1-201ENST00000404291 MUSTN1Q8IVN3 82 aa5.25□□□□□ -1.57
STAG3L1-201ENST00000404291 PRO1854Q9UHT4 67 aa5.25□□□□□ -1.57
STAG3L1-201ENST00000404291 KLK12Q9UKR0 248 aa5.25□□□□□ -1.57
STAG3L1-201ENST00000404291 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 TRAV13-1A0A0B4J241 112 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 A0A1B0GUV1 79 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 A4D1N5 150 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 F8W1H4 67 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 TSPAN13O95857 204 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 IFITM1P13164 125 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 MIAQ16674 131 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 OCIAD2Q56VL3 154 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 ADAMTSL4-AS1Q5T5F5 129 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 ZNF625Q96I27 306 aaPredicted RBP5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 PPDPFQ9H3Y8 114 aa5.24□□□□□ -1.57
STAG3L1-201ENST00000404291 IGLV4-60A0A075B6I1 120 aa5.23□□□□□ -1.57
STAG3L1-201ENST00000404291 APOMO95445 188 aa5.23□□□□□ -1.57
STAG3L1-201ENST00000404291 GAGE6Q13070 117 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms