RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 CXCL5P42830 114 aa16.69■□□□□ 0.26
HIST2H3A-201ENST00000403683 MEIG1Q5JSS6 88 aa16.69■□□□□ 0.26
HIST2H3A-201ENST00000403683 HIGD1BQ9P298 99 aa16.69■□□□□ 0.26
HIST2H3A-201ENST00000403683 CIRBPQ14011 172 aaKnown RBP16.68■□□□□ 0.26
HIST2H3A-201ENST00000403683 SRSF9Q13242 221 aaKnown RBP eCLIP16.66■□□□□ 0.26
HIST2H3A-201ENST00000403683 Q6ZR54 194 aa16.66■□□□□ 0.26
HIST2H3A-201ENST00000403683 A0A0U1RRA0 63 aa16.65■□□□□ 0.26
HIST2H3A-201ENST00000403683 HIST1H4GQ99525 98 aa16.65■□□□□ 0.26
HIST2H3A-201ENST00000403683 NTN5Q8WTR8 489 aaPredicted RBP16.65■□□□□ 0.26
HIST2H3A-201ENST00000403683 CAMK2N2Q96S95 79 aa16.65■□□□□ 0.26
HIST2H3A-201ENST00000403683 GVQW2A0A096LPI5 108 aaPredicted RBP16.64■□□□□ 0.25
HIST2H3A-201ENST00000403683 TMEM238C9JI98 176 aa16.64■□□□□ 0.25
HIST2H3A-201ENST00000403683 UNQ6190/PRO20217Q6UXQ8 127 aa16.64■□□□□ 0.25
HIST2H3A-201ENST00000403683 LINC00587B1AMM8 73 aa16.62■□□□□ 0.25
HIST2H3A-201ENST00000403683 SMIM13P0DJ93 91 aa16.61■□□□□ 0.25
HIST2H3A-201ENST00000403683 PFN2P35080 140 aa16.61■□□□□ 0.25
HIST2H3A-201ENST00000403683 LINC00158P58513 81 aa16.61■□□□□ 0.25
HIST2H3A-201ENST00000403683 C1orf134Q5TEV5 83 aa16.61■□□□□ 0.25
HIST2H3A-201ENST00000403683 C2orf48Q96LS8 159 aa16.61■□□□□ 0.25
HIST2H3A-201ENST00000403683 C10orf25Q5T742 122 aa16.6■□□□□ 0.25
HIST2H3A-201ENST00000403683 TIMM17BO60830 172 aa16.59■□□□□ 0.25
HIST2H3A-201ENST00000403683 HSD52Q0P140 79 aa16.59■□□□□ 0.25
HIST2H3A-201ENST00000403683 ERG28Q9UKR5 140 aa16.59■□□□□ 0.25
HIST2H3A-201ENST00000403683 ALMS1Q8TCU4 4167 aa16.59■□□□□ 0.25
HIST2H3A-201ENST00000403683 Q6ZRN7 208 aaPredicted RBP16.59■□□□□ 0.25
HIST2H3A-201ENST00000403683 HINT1P49773 126 aaPredicted RBP16.58■□□□□ 0.24
HIST2H3A-201ENST00000403683 ADAMTSL4-AS1Q5T5F5 129 aa16.58■□□□□ 0.24
HIST2H3A-201ENST00000403683 GCSHP23434 173 aa16.57■□□□□ 0.24
HIST2H3A-201ENST00000403683 WFDC2Q14508 124 aa16.57■□□□□ 0.24
HIST2H3A-201ENST00000403683 DAND5Q8N907 189 aa16.57■□□□□ 0.24
HIST2H3A-201ENST00000403683 SPANXB1Q9NS25 103 aaPredicted RBP16.57■□□□□ 0.24
HIST2H3A-201ENST00000403683 F8WDY8 70 aa16.56■□□□□ 0.24
HIST2H3A-201ENST00000403683 SYCNQ0VAF6 134 aa16.56■□□□□ 0.24
HIST2H3A-201ENST00000403683 BATFQ16520 125 aa16.56■□□□□ 0.24
HIST2H3A-201ENST00000403683 C14orf177Q52M58 125 aa16.56■□□□□ 0.24
HIST2H3A-201ENST00000403683 C9orf116Q5BN46 136 aaPredicted RBP16.56■□□□□ 0.24
HIST2H3A-201ENST00000403683 KMT2AQ03164 3969 aa16.56■□□□□ 0.24
HIST2H3A-201ENST00000403683 TAL2Q16559 108 aa16.56■□□□□ 0.24
HIST2H3A-201ENST00000403683 Q6ZRU5 148 aa16.56■□□□□ 0.24
HIST2H3A-201ENST00000403683 LITAFQ99732 161 aa16.56■□□□□ 0.24
HIST2H3A-201ENST00000403683 NPC2P61916 151 aa16.55■□□□□ 0.24
HIST2H3A-201ENST00000403683 C6orf48Q9UBA6 75 aa16.54■□□□□ 0.24
HIST2H3A-201ENST00000403683 M0R143 59 aa16.53■□□□□ 0.24
HIST2H3A-201ENST00000403683 CEND1Q8N111 149 aa16.53■□□□□ 0.24
HIST2H3A-201ENST00000403683 DNAH10Q8IVF4 4471 aa16.53■□□□□ 0.24
HIST2H3A-201ENST00000403683 TRBV30A0A0K0K1B3 111 aa16.53■□□□□ 0.24
HIST2H3A-201ENST00000403683 PTTG1IPP53801 180 aa16.53■□□□□ 0.24
HIST2H3A-201ENST00000403683 SPANXDQ9BXN6 97 aa16.53■□□□□ 0.24
HIST2H3A-201ENST00000403683 SPANXCQ9NY87 97 aa16.53■□□□□ 0.24
HIST2H3A-201ENST00000403683 COX17Q14061 63 aa16.52■□□□□ 0.23
HIST2H3A-201ENST00000403683 Q6ZVH6 145 aa16.52■□□□□ 0.23
HIST2H3A-201ENST00000403683 MIR7-3HGQ8N6C7 128 aa16.52■□□□□ 0.23
HIST2H3A-201ENST00000403683 CARD19Q96LW7 228 aa16.52■□□□□ 0.23
HIST2H3A-201ENST00000403683 LRCOL1A6NCL2 159 aa16.5■□□□□ 0.23
HIST2H3A-201ENST00000403683 MUSTN1Q8IVN3 82 aa16.5■□□□□ 0.23
HIST2H3A-201ENST00000403683 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.5■□□□□ 0.23
HIST2H3A-201ENST00000403683 LCE6AA0A183 80 aa16.49■□□□□ 0.23
HIST2H3A-201ENST00000403683 BVES-AS1Q5T3Y7 98 aa16.49■□□□□ 0.23
HIST2H3A-201ENST00000403683 SLPIP03973 132 aa16.48■□□□□ 0.23
HIST2H3A-201ENST00000403683 COPS9Q8WXC6 57 aa16.48■□□□□ 0.23
HIST2H3A-201ENST00000403683 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.46■□□□□ 0.23
HIST2H3A-201ENST00000403683 IFITM1P13164 125 aa16.46■□□□□ 0.23
HIST2H3A-201ENST00000403683 RPL24P83731 157 aaKnown RBP16.46■□□□□ 0.23
HIST2H3A-201ENST00000403683 LINC00308Q8TCZ7 52 aa16.46■□□□□ 0.23
HIST2H3A-201ENST00000403683 FXYD2P54710 66 aa16.45■□□□□ 0.22
HIST2H3A-201ENST00000403683 SNHG12Q9BXW3 62 aa16.45■□□□□ 0.22
HIST2H3A-201ENST00000403683 DNAH6Q9C0G6 4158 aa16.45■□□□□ 0.22
HIST2H3A-201ENST00000403683 A0A087WTM6 91 aa16.44■□□□□ 0.22
HIST2H3A-201ENST00000403683 TMEM238LA0A1B0GVL6 79 aa16.43■□□□□ 0.22
HIST2H3A-201ENST00000403683 A6NJY4 79 aa16.43■□□□□ 0.22
HIST2H3A-201ENST00000403683 RNF151Q2KHN1 245 aa16.42■□□□□ 0.22
HIST2H3A-201ENST00000403683 Q8N814 137 aa16.42■□□□□ 0.22
HIST2H3A-201ENST00000403683 EREGO14944 169 aa16.41■□□□□ 0.22
HIST2H3A-201ENST00000403683 NDUFC2-KCTD14E9PQ53 114 aa16.4■□□□□ 0.22
HIST2H3A-201ENST00000403683 EIF4EBP3O60516 100 aaPredicted RBP16.4■□□□□ 0.22
HIST2H3A-201ENST00000403683 CNBPP62633 177 aaKnown RBP16.4■□□□□ 0.22
HIST2H3A-201ENST00000403683 A4D1N5 150 aa16.4■□□□□ 0.22
HIST2H3A-201ENST00000403683 RPL18AQ02543 176 aaKnown RBP16.4■□□□□ 0.22
HIST2H3A-201ENST00000403683 SOSTDC1Q6X4U4 206 aa16.4■□□□□ 0.22
HIST2H3A-201ENST00000403683 SND1-IT1Q9HBX3 110 aa16.4■□□□□ 0.22
HIST2H3A-201ENST00000403683 A6NDN8 102 aa16.39■□□□□ 0.21
HIST2H3A-201ENST00000403683 GAGE2EQ4V326 116 aa16.39■□□□□ 0.21
HIST2H3A-201ENST00000403683 NHP2Q9NX24 153 aaKnown RBP16.39■□□□□ 0.21
HIST2H3A-201ENST00000403683 GAGE2DQ9UEU5 116 aa16.39■□□□□ 0.21
HIST2H3A-201ENST00000403683 DNAH2Q9P225 4427 aa16.38■□□□□ 0.21
HIST2H3A-201ENST00000403683 XAGE1AQ9HD64 81 aa16.37■□□□□ 0.21
HIST2H3A-201ENST00000403683 RTL8CO15255 209 aa16.36■□□□□ 0.21
HIST2H3A-201ENST00000403683 TNP2Q05952 138 aa16.36■□□□□ 0.21
HIST2H3A-201ENST00000403683 Q6ZRP5 223 aa16.35■□□□□ 0.21
HIST2H3A-201ENST00000403683 LOC107984640A0A0U1RRK4 108 aa16.34■□□□□ 0.21
HIST2H3A-201ENST00000403683 TLX1NBP0CAT3 122 aa16.32■□□□□ 0.2
HIST2H3A-201ENST00000403683 GAGE2BQ13066 116 aa16.32■□□□□ 0.2
HIST2H3A-201ENST00000403683 COL5A1-AS1Q5SY13 56 aa16.31■□□□□ 0.2
HIST2H3A-201ENST00000403683 RAB37Q96AX2 223 aa16.31■□□□□ 0.2
HIST2H3A-201ENST00000403683 K7ERJ3 54 aa16.3■□□□□ 0.2
HIST2H3A-201ENST00000403683 PPDPFQ9H3Y8 114 aa16.3■□□□□ 0.2
HIST2H3A-201ENST00000403683 HYDINQ4G0P3 5121 aa16.3■□□□□ 0.2
HIST2H3A-201ENST00000403683 CFC1BP0CG36 223 aa16.3■□□□□ 0.2
HIST2H3A-201ENST00000403683 CFC1P0CG37 223 aa16.3■□□□□ 0.2
HIST2H3A-201ENST00000403683 LOC107984156A0A0G2JMH3 177 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms