RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TOMM7Q9P0U1 55 aa13.89□□□□□ -0.19
CCDC47-202ENST00000403162 FAM110AQ9BQ89 295 aa13.89□□□□□ -0.19
CCDC47-202ENST00000403162 Q9HAA7 133 aa13.88□□□□□ -0.19
CCDC47-202ENST00000403162 IGLV4-60A0A075B6I1 120 aa13.88□□□□□ -0.19
CCDC47-202ENST00000403162 TRBV6-8A0A0A6YYG3 113 aa13.88□□□□□ -0.19
CCDC47-202ENST00000403162 TRGV4A0A0C4DH28 118 aa13.88□□□□□ -0.19
CCDC47-202ENST00000403162 IBA57-AS1B1ANH7 110 aa13.88□□□□□ -0.19
CCDC47-202ENST00000403162 LINC00158P58513 81 aa13.87□□□□□ -0.19
CCDC47-202ENST00000403162 SMIM11BQ8TCY0 68 aa13.87□□□□□ -0.19
CCDC47-202ENST00000403162 A0A087WZ39 114 aa13.86□□□□□ -0.19
CCDC47-202ENST00000403162 CCL18P55774 89 aa13.86□□□□□ -0.19
CCDC47-202ENST00000403162 CSNK1G2-AS1Q8NCQ2 148 aa13.86□□□□□ -0.19
CCDC47-202ENST00000403162 CXCL5P42830 114 aa13.86□□□□□ -0.19
CCDC47-202ENST00000403162 LINC00482Q8N8I6 264 aa13.86□□□□□ -0.19
CCDC47-202ENST00000403162 H0YGX0 51 aa13.85□□□□□ -0.19
CCDC47-202ENST00000403162 C19orf73Q9NVV2 129 aa13.85□□□□□ -0.19
CCDC47-202ENST00000403162 IGKV3OR2-268A0A0C4DH90 116 aa13.85□□□□□ -0.19
CCDC47-202ENST00000403162 FHL2Q14192 279 aa13.85□□□□□ -0.19
CCDC47-202ENST00000403162 A0A087WYN8 130 aa13.84□□□□□ -0.19
CCDC47-202ENST00000403162 DNAL4O96015 105 aa13.84□□□□□ -0.19
CCDC47-202ENST00000403162 WFDC10AQ9H1F0 79 aa13.84□□□□□ -0.19
CCDC47-202ENST00000403162 ATP5G1P05496 136 aa13.83□□□□□ -0.19
CCDC47-202ENST00000403162 RPL35AP18077 110 aaKnown RBP13.83□□□□□ -0.19
CCDC47-202ENST00000403162 GAGE2AQ6NT46 116 aa13.83□□□□□ -0.19
CCDC47-202ENST00000403162 C5orf38Q86SI9 138 aa13.83□□□□□ -0.19
CCDC47-202ENST00000403162 IGLV1-51P01701 117 aa13.81□□□□□ -0.2
CCDC47-202ENST00000403162 NOTCH3Q9UM47 2321 aa13.81□□□□□ -0.2
CCDC47-202ENST00000403162 SPATA3Q8NHX4 192 aa13.81□□□□□ -0.2
CCDC47-202ENST00000403162 OBSCN-AS1Q96MR7 158 aa13.81□□□□□ -0.2
CCDC47-202ENST00000403162 TMEM126AQ9H061 195 aa13.8□□□□□ -0.2
CCDC47-202ENST00000403162 LINC00959A0A1B0GUT2 108 aa13.79□□□□□ -0.2
CCDC47-202ENST00000403162 PFN2P35080 140 aa13.78□□□□□ -0.2
CCDC47-202ENST00000403162 PAX4O43316 350 aa13.76□□□□□ -0.21
CCDC47-202ENST00000403162 C3orf22Q8N5N4 141 aa13.76□□□□□ -0.21
CCDC47-202ENST00000403162 C9orf129Q5T035 196 aaKnown RBP13.76□□□□□ -0.21
CCDC47-202ENST00000403162 COL6A5A8TX70 2615 aa13.76□□□□□ -0.21
CCDC47-202ENST00000403162 STAB1Q9NY15 2570 aa13.75□□□□□ -0.21
CCDC47-202ENST00000403162 LECT2O14960 151 aa13.75□□□□□ -0.21
CCDC47-202ENST00000403162 MDFIQ99750 246 aa13.75□□□□□ -0.21
CCDC47-202ENST00000403162 KLK5Q9Y337 293 aaPredicted RBP13.75□□□□□ -0.21
CCDC47-202ENST00000403162 UQCRQO14949 82 aa13.74□□□□□ -0.21
CCDC47-202ENST00000403162 C6orf226Q5I0X4 101 aa13.74□□□□□ -0.21
CCDC47-202ENST00000403162 SMIM20Q8N5G0 67 aa13.74□□□□□ -0.21
CCDC47-202ENST00000403162 C14orf132Q9NPU4 83 aa13.74□□□□□ -0.21
CCDC47-202ENST00000403162 VWFP04275 2813 aa13.74□□□□□ -0.21
CCDC47-202ENST00000403162 HIST1H4AP62805 103 aaKnown RBP13.73□□□□□ -0.21
CCDC47-202ENST00000403162 C9orf66Q5T8R8 295 aa13.73□□□□□ -0.21
CCDC47-202ENST00000403162 OR13C6PQ8NH95 151 aa13.73□□□□□ -0.21
CCDC47-202ENST00000403162 KIR2DL5BQ8NHK3 375 aa13.73□□□□□ -0.21
CCDC47-202ENST00000403162 Q8IZM0 81 aa13.72□□□□□ -0.21
CCDC47-202ENST00000403162 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
CCDC47-202ENST00000403162 A0A1B0GUV1 79 aa13.72□□□□□ -0.21
CCDC47-202ENST00000403162 LINC00612Q8N6U2 182 aa13.72□□□□□ -0.21
CCDC47-202ENST00000403162 C9orf153Q5TBE3 101 aa13.71□□□□□ -0.21
CCDC47-202ENST00000403162 LINC01561Q8N1V8 128 aa13.71□□□□□ -0.21
CCDC47-202ENST00000403162 LINC00526Q96FQ7 95 aa13.71□□□□□ -0.21
CCDC47-202ENST00000403162 SS18Q15532 418 aa13.71□□□□□ -0.22
CCDC47-202ENST00000403162 C11orf68Q9H3H3 251 aaKnown RBP13.69□□□□□ -0.22
CCDC47-202ENST00000403162 XCL1P47992 114 aa13.69□□□□□ -0.22
CCDC47-202ENST00000403162 Q6JHZ5 121 aa13.69□□□□□ -0.22
CCDC47-202ENST00000403162 DEFB130BP0DP73 79 aa13.68□□□□□ -0.22
CCDC47-202ENST00000403162 DEFB130AP0DP74 79 aa13.68□□□□□ -0.22
CCDC47-202ENST00000403162 GYPEP15421 78 aa13.68□□□□□ -0.22
CCDC47-202ENST00000403162 ORMDL1Q9P0S3 153 aa13.68□□□□□ -0.22
CCDC47-202ENST00000403162 TRRAPQ9Y4A5 3859 aa13.68□□□□□ -0.22
CCDC47-202ENST00000403162 LINC00167Q96N53 147 aa13.68□□□□□ -0.22
CCDC47-202ENST00000403162 LINC00846Q9NV44 126 aa13.68□□□□□ -0.22
CCDC47-202ENST00000403162 ATOX1O00244 68 aa13.67□□□□□ -0.22
CCDC47-202ENST00000403162 COX7CP15954 63 aa13.67□□□□□ -0.22
CCDC47-202ENST00000403162 NCR3O14931 201 aa13.66□□□□□ -0.22
CCDC47-202ENST00000403162 A0A1B0GX51 115 aa13.66□□□□□ -0.22
CCDC47-202ENST00000403162 SLPIP03973 132 aa13.66□□□□□ -0.22
CCDC47-202ENST00000403162 C2orf48Q96LS8 159 aa13.65□□□□□ -0.22
CCDC47-202ENST00000403162 NDUFC2O95298 119 aa13.63□□□□□ -0.23
CCDC47-202ENST00000403162 NANOS2P60321 138 aaKnown RBP13.63□□□□□ -0.23
CCDC47-202ENST00000403162 RPL18AQ02543 176 aaKnown RBP13.62□□□□□ -0.23
CCDC47-202ENST00000403162 PRO0255Q9UI72 69 aa13.62□□□□□ -0.23
CCDC47-202ENST00000403162 COX17Q14061 63 aa13.62□□□□□ -0.23
CCDC47-202ENST00000403162 CCKP06307 115 aa13.61□□□□□ -0.23
CCDC47-202ENST00000403162 OXLD1Q5BKU9 147 aa13.61□□□□□ -0.23
CCDC47-202ENST00000403162 IGKV3D-7A0A0C4DH55 119 aa13.61□□□□□ -0.23
CCDC47-202ENST00000403162 CRYGAP11844 174 aa13.61□□□□□ -0.23
CCDC47-202ENST00000403162 KIAA0087Q14695 138 aa13.61□□□□□ -0.23
CCDC47-202ENST00000403162 CLPSL2Q6UWE3 100 aa13.61□□□□□ -0.23
CCDC47-202ENST00000403162 WIPF1O43516 503 aa13.6□□□□□ -0.23
CCDC47-202ENST00000403162 Q8N814 137 aa13.6□□□□□ -0.23
CCDC47-202ENST00000403162 JMJD7-PLA2G4BH0Y9G9 81 aa13.59□□□□□ -0.23
CCDC47-202ENST00000403162 CD164L2Q6UWJ8 174 aa13.59□□□□□ -0.23
CCDC47-202ENST00000403162 X6R8D5 127 aa13.59□□□□□ -0.23
CCDC47-202ENST00000403162 ANK2Q01484 3957 aa13.58□□□□□ -0.24
CCDC47-202ENST00000403162 SMIM9A6NGZ8 99 aa13.58□□□□□ -0.24
CCDC47-202ENST00000403162 IGHV4-28A0A0C4DH34 117 aa13.57□□□□□ -0.24
CCDC47-202ENST00000403162 TMEM256-PLSCR3K7ERE1 68 aa13.56□□□□□ -0.24
CCDC47-202ENST00000403162 PRR3P79522 188 aaKnown RBP13.56□□□□□ -0.24
CCDC47-202ENST00000403162 CFAP161Q6P656 301 aa13.56□□□□□ -0.24
CCDC47-202ENST00000403162 LINC00269Q8N2A0 174 aa13.55□□□□□ -0.24
CCDC47-202ENST00000403162 A0A096LPF7 62 aa13.55□□□□□ -0.24
CCDC47-202ENST00000403162 S100A7L2Q5SY68 101 aa13.54□□□□□ -0.24
CCDC47-202ENST00000403162 CHCHD10Q8WYQ3 142 aaPredicted RBP13.54□□□□□ -0.24
CCDC47-202ENST00000403162 LYRM9A8MSI8 78 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms