RNA–Protein interactions for RNA: ENST00000401813.7

FAAP20-205, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-205ENST00000401813 LRRK2Q5S007 2527 aa13.3□□□□□ -0.28
FAAP20-205ENST00000401813 SERP2Q8N6R1 65 aa13.3□□□□□ -0.28
FAAP20-205ENST00000401813 CCKP06307 115 aa13.29□□□□□ -0.28
FAAP20-205ENST00000401813 CSNK1G2-AS1Q8NCQ2 148 aa13.28□□□□□ -0.28
FAAP20-205ENST00000401813 USP17L23D6RBM5 183 aa13.28□□□□□ -0.28
FAAP20-205ENST00000401813 UPK3BQ9BT76 320 aa13.28□□□□□ -0.28
FAAP20-205ENST00000401813 XCL1P47992 114 aa13.27□□□□□ -0.29
FAAP20-205ENST00000401813 DEFB113Q30KQ7 82 aa13.27□□□□□ -0.29
FAAP20-205ENST00000401813 LINC00167Q96N53 147 aa13.27□□□□□ -0.29
FAAP20-205ENST00000401813 CMC4P56277 68 aaPredicted RBP13.26□□□□□ -0.29
FAAP20-205ENST00000401813 NANOS2P60321 138 aaKnown RBP13.26□□□□□ -0.29
FAAP20-205ENST00000401813 TMEM86BQ8N661 226 aa13.26□□□□□ -0.29
FAAP20-205ENST00000401813 PTPN13Q12923 2485 aa13.25□□□□□ -0.29
FAAP20-205ENST00000401813 PRR3P79522 188 aaKnown RBP13.25□□□□□ -0.29
FAAP20-205ENST00000401813 CENPEQ02224 2701 aa13.25□□□□□ -0.29
FAAP20-205ENST00000401813 FAM19A5Q7Z5A7 132 aaPredicted RBP13.24□□□□□ -0.29
FAAP20-205ENST00000401813 C19orf73Q9NVV2 129 aa13.24□□□□□ -0.29
FAAP20-205ENST00000401813 SETXQ7Z333 2677 aaKnown RBP13.24□□□□□ -0.29
FAAP20-205ENST00000401813 RPS28P62857 69 aaKnown RBP13.24□□□□□ -0.29
FAAP20-205ENST00000401813 Q8IZM0 81 aa13.24□□□□□ -0.29
FAAP20-205ENST00000401813 Q8N814 137 aa13.23□□□□□ -0.29
FAAP20-205ENST00000401813 DNAJC9-AS1A6NH13 148 aa13.22□□□□□ -0.29
FAAP20-205ENST00000401813 JMJD7-PLA2G4BH0Y9G9 81 aa13.22□□□□□ -0.29
FAAP20-205ENST00000401813 C5orf47Q569G3 176 aa13.21□□□□□ -0.29
FAAP20-205ENST00000401813 CLPSL2Q6UWE3 100 aa13.21□□□□□ -0.29
FAAP20-205ENST00000401813 EPG5Q9HCE0 2579 aa13.21□□□□□ -0.29
FAAP20-205ENST00000401813 TMEM258P61165 79 aa13.21□□□□□ -0.29
FAAP20-205ENST00000401813 HILS1P60008 231 aa13.2□□□□□ -0.3
FAAP20-205ENST00000401813 KIR2DL5BQ8NHK3 375 aa13.2□□□□□ -0.3
FAAP20-205ENST00000401813 NIPBLQ6KC79 2804 aaeCLIP13.2□□□□□ -0.3
FAAP20-205ENST00000401813 JMJD1CQ15652 2540 aa13.2□□□□□ -0.3
FAAP20-205ENST00000401813 DEFB130BP0DP73 79 aa13.2□□□□□ -0.3
FAAP20-205ENST00000401813 DEFB130AP0DP74 79 aa13.2□□□□□ -0.3
FAAP20-205ENST00000401813 S100A7L2Q5SY68 101 aa13.2□□□□□ -0.3
FAAP20-205ENST00000401813 NAV2Q8IVL1 2488 aa13.2□□□□□ -0.3
FAAP20-205ENST00000401813 TLN2Q9Y4G6 2542 aa13.19□□□□□ -0.3
FAAP20-205ENST00000401813 TMEM256-PLSCR3K7ERE1 68 aa13.19□□□□□ -0.3
FAAP20-205ENST00000401813 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
FAAP20-205ENST00000401813 ABCA12Q86UK0 2595 aa13.19□□□□□ -0.3
FAAP20-205ENST00000401813 GYPEP15421 78 aa13.18□□□□□ -0.3
FAAP20-205ENST00000401813 DPH3Q96FX2 82 aa13.18□□□□□ -0.3
FAAP20-205ENST00000401813 IGLV1-51P01701 117 aa13.18□□□□□ -0.3
FAAP20-205ENST00000401813 A0A1B0GUV1 79 aa13.17□□□□□ -0.3
FAAP20-205ENST00000401813 KRTAP1-3Q8IUG1 177 aa13.17□□□□□ -0.3
FAAP20-205ENST00000401813 ESM1Q9NQ30 184 aa13.17□□□□□ -0.3
FAAP20-205ENST00000401813 ZNF469Q96JG9 3925 aaPredicted RBP13.17□□□□□ -0.3
FAAP20-205ENST00000401813 NDUFC2O95298 119 aa13.16□□□□□ -0.3
FAAP20-205ENST00000401813 ATP5EP2Q5VTU8 51 aa13.16□□□□□ -0.3
FAAP20-205ENST00000401813 SMIM9A6NGZ8 99 aa13.15□□□□□ -0.3
FAAP20-205ENST00000401813 FAM19A1Q7Z5A9 133 aa13.15□□□□□ -0.3
FAAP20-205ENST00000401813 KIAA0087Q14695 138 aa13.14□□□□□ -0.31
FAAP20-205ENST00000401813 LYPD5Q6UWN5 251 aa13.14□□□□□ -0.31
FAAP20-205ENST00000401813 NF1P21359 2839 aa13.14□□□□□ -0.31
FAAP20-205ENST00000401813 TRAV23DV6A0A075B6W5 121 aa13.14□□□□□ -0.31
FAAP20-205ENST00000401813 GHRHP01286 108 aa13.14□□□□□ -0.31
FAAP20-205ENST00000401813 ENHOQ6UWT2 76 aa13.14□□□□□ -0.31
FAAP20-205ENST00000401813 A0A096LPF7 62 aa13.13□□□□□ -0.31
FAAP20-205ENST00000401813 RNASE1P07998 156 aaKnown RBP13.13□□□□□ -0.31
FAAP20-205ENST00000401813 DSCR8Q96T75 97 aa13.13□□□□□ -0.31
FAAP20-205ENST00000401813 COX17Q14061 63 aa13.12□□□□□ -0.31
FAAP20-205ENST00000401813 C6orf99Q4VX62 202 aa13.12□□□□□ -0.31
FAAP20-205ENST00000401813 C9orf116Q5BN46 136 aaPredicted RBP13.12□□□□□ -0.31
FAAP20-205ENST00000401813 Q8NDZ9 215 aa13.11□□□□□ -0.31
FAAP20-205ENST00000401813 LINC00612Q8N6U2 182 aa13.11□□□□□ -0.31
FAAP20-205ENST00000401813 OXTP01178 125 aa13.1□□□□□ -0.31
FAAP20-205ENST00000401813 LINC00269Q8N2A0 174 aa13.1□□□□□ -0.31
FAAP20-205ENST00000401813 LINC01006Q8NI28 216 aa13.1□□□□□ -0.31
FAAP20-205ENST00000401813 UBL5Q9BZL1 73 aa13.1□□□□□ -0.31
FAAP20-205ENST00000401813 CD164L2Q6UWJ8 174 aa13.09□□□□□ -0.31
FAAP20-205ENST00000401813 APCP25054 2843 aa13.09□□□□□ -0.31
FAAP20-205ENST00000401813 SONP18583 2426 aaKnown RBP13.08□□□□□ -0.32
FAAP20-205ENST00000401813 WIPF1O43516 503 aa13.08□□□□□ -0.32
FAAP20-205ENST00000401813 LINC00575Q6W349 94 aa13.08□□□□□ -0.32
FAAP20-205ENST00000401813 IGLV10-54A0A075B6I4 117 aa13.07□□□□□ -0.32
FAAP20-205ENST00000401813 IGHV4-28A0A0C4DH34 117 aa13.07□□□□□ -0.32
FAAP20-205ENST00000401813 TRBV10-3A0A0K0K1G6 114 aa13.07□□□□□ -0.32
FAAP20-205ENST00000401813 CHCHD10Q8WYQ3 142 aaPredicted RBP13.07□□□□□ -0.32
FAAP20-205ENST00000401813 PRO0255Q9UI72 69 aa13.07□□□□□ -0.32
FAAP20-205ENST00000401813 WFDC11Q8NEX6 87 aa13.06□□□□□ -0.32
FAAP20-205ENST00000401813 Q6ZQT0 140 aa13.05□□□□□ -0.32
FAAP20-205ENST00000401813 Q8N3U1 123 aa13.05□□□□□ -0.32
FAAP20-205ENST00000401813 RBM3P98179 157 aaKnown RBP13.04□□□□□ -0.32
FAAP20-205ENST00000401813 SETD2Q9BYW2 2564 aaPredicted RBP13.03□□□□□ -0.32
FAAP20-205ENST00000401813 ITPR3Q14573 2671 aa13.03□□□□□ -0.32
FAAP20-205ENST00000401813 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.32
FAAP20-205ENST00000401813 ANGP03950 147 aaKnown RBP13.02□□□□□ -0.32
FAAP20-205ENST00000401813 REG3AQ06141 175 aa13.02□□□□□ -0.32
FAAP20-205ENST00000401813 X6R8D5 127 aa13.02□□□□□ -0.32
FAAP20-205ENST00000401813 M0R2N4 97 aa13.02□□□□□ -0.33
FAAP20-205ENST00000401813 C16orf95Q9H693 158 aa13.02□□□□□ -0.33
FAAP20-205ENST00000401813 C20orf197Q8N268 126 aa13.01□□□□□ -0.33
FAAP20-205ENST00000401813 LAMTOR3Q9UHA4 124 aa13.01□□□□□ -0.33
FAAP20-205ENST00000401813 LOC110117498A0A087WWA1 95 aa13.01□□□□□ -0.33
FAAP20-205ENST00000401813 NDUFC2-KCTD14E9PQ53 114 aa13□□□□□ -0.33
FAAP20-205ENST00000401813 C6orf223Q8N319 242 aa13□□□□□ -0.33
FAAP20-205ENST00000401813 C10orf25Q5T742 122 aa13□□□□□ -0.33
FAAP20-205ENST00000401813 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
FAAP20-205ENST00000401813 FN1P02751 2386 aaKnown RBP12.97□□□□□ -0.33
FAAP20-205ENST00000401813 LINC01547P58512 204 aaPredicted RBP12.97□□□□□ -0.33
FAAP20-205ENST00000401813 SPATA3Q8NHX4 192 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms