RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 K7EQD1 137 aa6.98□□□□□ -1.29
PTCHD4-202ENST00000398738 TMEM243Q9BU79 118 aa6.98□□□□□ -1.29
PTCHD4-202ENST00000398738 RPL28P46779 137 aaKnown RBP6.98□□□□□ -1.29
PTCHD4-202ENST00000398738 LRRC75A-AS1Q8N1F1 130 aa6.98□□□□□ -1.29
PTCHD4-202ENST00000398738 IGLV4-60A0A075B6I1 120 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 C6orf226Q5I0X4 101 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 RPL35AP18077 110 aaKnown RBP6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 C1orf158Q8N1D5 194 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 ZNF843Q8N446 348 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 WFDC10AQ9H1F0 79 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 A0A096LPF7 62 aa6.96□□□□□ -1.29
PTCHD4-202ENST00000398738 XCL1P47992 114 aa6.96□□□□□ -1.29
PTCHD4-202ENST00000398738 FAM222AQ5U5X8 452 aa6.96□□□□□ -1.29
PTCHD4-202ENST00000398738 DOPEY1Q5JWR5 2465 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 CRYGAP11844 174 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 C4orf26Q17RF5 130 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 FAM19A1Q7Z5A9 133 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 IGSF10Q6WRI0 2623 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 TRGV4A0A0C4DH28 118 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 C5orf47Q569G3 176 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 HRCT1Q6UXD1 115 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 ZNF702PQ9H963 129 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 AKAP9Q99996 3911 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 GCN1Q92616 2671 aaKnown RBP6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 ENHOQ6UWT2 76 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 ACANP16112 2415 aa6.94□□□□□ -1.3
PTCHD4-202ENST00000398738 DEFB114Q30KQ6 69 aa6.94□□□□□ -1.3
PTCHD4-202ENST00000398738 ODF3L2Q3SX64 289 aa6.94□□□□□ -1.3
PTCHD4-202ENST00000398738 DPH3Q96FX2 82 aa6.94□□□□□ -1.3
PTCHD4-202ENST00000398738 SETXQ7Z333 2677 aaKnown RBP6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 OXTP01178 125 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 ORMDL1Q9P0S3 153 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 H0YGX0 51 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 DEFB130BP0DP73 79 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 DEFB130AP0DP74 79 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 A8MTW9 85 aa6.92□□□□□ -1.3
PTCHD4-202ENST00000398738 PRB1P04280 392 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 FHL2Q14192 279 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 Q6JHZ5 121 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 HIVEP2P31629 2446 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 IGLV10-54A0A075B6I4 117 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 OVOL2Q9BRP0 275 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.3
PTCHD4-202ENST00000398738 APCP25054 2843 aa6.9□□□□□ -1.3
PTCHD4-202ENST00000398738 TRBV10-1A0A0K0K1A3 114 aa6.9□□□□□ -1.31
PTCHD4-202ENST00000398738 C9orf116Q5BN46 136 aaPredicted RBP6.9□□□□□ -1.31
PTCHD4-202ENST00000398738 HAMPP81172 84 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 IGHV3OR16-9A0A0B4J2B5 98 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 TMEM258P61165 79 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 ZNF462Q96JM2 2506 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 TMEM86BQ8N661 226 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 ESM1Q9NQ30 184 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 IBA57-AS1B1ANH7 110 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 CCKP06307 115 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 UPK3BQ9BT76 320 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 TRBV6-4A0A1B0GX49 114 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 SS18Q15532 418 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 LAMTOR3Q9UHA4 124 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
PTCHD4-202ENST00000398738 UBR5O95071 2799 aaPredicted RBP6.87□□□□□ -1.31
PTCHD4-202ENST00000398738 TRBV6-8A0A0A6YYG3 113 aa6.87□□□□□ -1.31
PTCHD4-202ENST00000398738 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 Q6YL49 198 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 SCXQ7RTU7 201 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 UBL5Q9BZL1 73 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 WFDC11Q8NEX6 87 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 A0A087WZ39 114 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 M0R2N4 97 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 RPS28P62857 69 aaKnown RBP6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 S100A7L2Q5SY68 101 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 FAM19A3Q7Z5A8 133 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 Q8N814 137 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 C4orf3Q8WVX3 66 aa6.84□□□□□ -1.31
PTCHD4-202ENST00000398738 OBSCN-AS1Q96MR7 158 aa6.84□□□□□ -1.31
PTCHD4-202ENST00000398738 A0A096LNT2 108 aa6.83□□□□□ -1.32
PTCHD4-202ENST00000398738 CCL24O00175 119 aa6.83□□□□□ -1.32
PTCHD4-202ENST00000398738 TMEM256-PLSCR3K7ERE1 68 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 DEFB4AO15263 64 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 JMJD7-PLA2G4BH0Y9G9 81 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 NANOS2P60321 138 aaKnown RBP6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 SPATA3Q8NHX4 192 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 NOTCH2Q04721 2471 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 GIG44P09565 113 aaPredicted RBP6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 J3QKU1 62 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 TRAV10A0A0B4J240 114 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 PLAC8L1A1L4L8 177 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 Q5XG85 94 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 IL17DQ8TAD2 202 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 RMI2Q96E14 147 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 FLNAP21333 2647 aaKnown RBP6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 FAM236DA0A1B0GTK5 79 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 FAM236CP0DP71 79 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 RBM3P98179 157 aaKnown RBP6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 Q8NDZ9 215 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 C16orf74Q96GX8 76 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms