RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 K7EQD1 137 aa6.98□□□□□ -1.29
PTCHD4-202ENST00000398738 TMEM243Q9BU79 118 aa6.98□□□□□ -1.29
PTCHD4-202ENST00000398738 RPL28P46779 137 aaKnown RBP6.98□□□□□ -1.29
PTCHD4-202ENST00000398738 LRRC75A-AS1Q8N1F1 130 aa6.98□□□□□ -1.29
PTCHD4-202ENST00000398738 IGLV4-60A0A075B6I1 120 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 C6orf226Q5I0X4 101 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 RPL35AP18077 110 aaKnown RBP6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 C1orf158Q8N1D5 194 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 ZNF843Q8N446 348 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 WFDC10AQ9H1F0 79 aa6.97□□□□□ -1.29
PTCHD4-202ENST00000398738 A0A096LPF7 62 aa6.96□□□□□ -1.29
PTCHD4-202ENST00000398738 XCL1P47992 114 aa6.96□□□□□ -1.29
PTCHD4-202ENST00000398738 FAM222AQ5U5X8 452 aa6.96□□□□□ -1.29
PTCHD4-202ENST00000398738 DOPEY1Q5JWR5 2465 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 CRYGAP11844 174 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 C4orf26Q17RF5 130 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 FAM19A1Q7Z5A9 133 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 IGSF10Q6WRI0 2623 aa6.96□□□□□ -1.3
PTCHD4-202ENST00000398738 TRGV4A0A0C4DH28 118 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 C5orf47Q569G3 176 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 HRCT1Q6UXD1 115 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 ZNF702PQ9H963 129 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 AKAP9Q99996 3911 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 GCN1Q92616 2671 aaKnown RBP6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 ENHOQ6UWT2 76 aa6.95□□□□□ -1.3
PTCHD4-202ENST00000398738 ACANP16112 2415 aa6.94□□□□□ -1.3
PTCHD4-202ENST00000398738 DEFB114Q30KQ6 69 aa6.94□□□□□ -1.3
PTCHD4-202ENST00000398738 ODF3L2Q3SX64 289 aa6.94□□□□□ -1.3
PTCHD4-202ENST00000398738 DPH3Q96FX2 82 aa6.94□□□□□ -1.3
PTCHD4-202ENST00000398738 SETXQ7Z333 2677 aaKnown RBP6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 OXTP01178 125 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 ORMDL1Q9P0S3 153 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 H0YGX0 51 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 DEFB130BP0DP73 79 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 DEFB130AP0DP74 79 aa6.93□□□□□ -1.3
PTCHD4-202ENST00000398738 A8MTW9 85 aa6.92□□□□□ -1.3
PTCHD4-202ENST00000398738 PRB1P04280 392 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 FHL2Q14192 279 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 Q6JHZ5 121 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 HIVEP2P31629 2446 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 IGLV10-54A0A075B6I4 117 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 OVOL2Q9BRP0 275 aa6.91□□□□□ -1.3
PTCHD4-202ENST00000398738 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.3
PTCHD4-202ENST00000398738 APCP25054 2843 aa6.9□□□□□ -1.3
PTCHD4-202ENST00000398738 TRBV10-1A0A0K0K1A3 114 aa6.9□□□□□ -1.31
PTCHD4-202ENST00000398738 C9orf116Q5BN46 136 aaPredicted RBP6.9□□□□□ -1.31
PTCHD4-202ENST00000398738 HAMPP81172 84 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 IGHV3OR16-9A0A0B4J2B5 98 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 TMEM258P61165 79 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 ZNF462Q96JM2 2506 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 TMEM86BQ8N661 226 aa6.89□□□□□ -1.31
PTCHD4-202ENST00000398738 ESM1Q9NQ30 184 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 IBA57-AS1B1ANH7 110 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 CCKP06307 115 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 UPK3BQ9BT76 320 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 TRBV6-4A0A1B0GX49 114 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 SS18Q15532 418 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 LAMTOR3Q9UHA4 124 aa6.88□□□□□ -1.31
PTCHD4-202ENST00000398738 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
PTCHD4-202ENST00000398738 UBR5O95071 2799 aaPredicted RBP6.87□□□□□ -1.31
PTCHD4-202ENST00000398738 TRBV6-8A0A0A6YYG3 113 aa6.87□□□□□ -1.31
PTCHD4-202ENST00000398738 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 Q6YL49 198 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 SCXQ7RTU7 201 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 UBL5Q9BZL1 73 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 WFDC11Q8NEX6 87 aa6.86□□□□□ -1.31
PTCHD4-202ENST00000398738 A0A087WZ39 114 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 M0R2N4 97 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 RPS28P62857 69 aaKnown RBP6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 S100A7L2Q5SY68 101 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 FAM19A3Q7Z5A8 133 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 Q8N814 137 aa6.85□□□□□ -1.31
PTCHD4-202ENST00000398738 C4orf3Q8WVX3 66 aa6.84□□□□□ -1.31
PTCHD4-202ENST00000398738 OBSCN-AS1Q96MR7 158 aa6.84□□□□□ -1.31
PTCHD4-202ENST00000398738 A0A096LNT2 108 aa6.83□□□□□ -1.32
PTCHD4-202ENST00000398738 CCL24O00175 119 aa6.83□□□□□ -1.32
PTCHD4-202ENST00000398738 TMEM256-PLSCR3K7ERE1 68 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 DEFB4AO15263 64 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 JMJD7-PLA2G4BH0Y9G9 81 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 NANOS2P60321 138 aaKnown RBP6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 SPATA3Q8NHX4 192 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 NOTCH2Q04721 2471 aa6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 GIG44P09565 113 aaPredicted RBP6.82□□□□□ -1.32
PTCHD4-202ENST00000398738 J3QKU1 62 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 TRAV10A0A0B4J240 114 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 PLAC8L1A1L4L8 177 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 Q5XG85 94 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 IL17DQ8TAD2 202 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 RMI2Q96E14 147 aa6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 FLNAP21333 2647 aaKnown RBP6.81□□□□□ -1.32
PTCHD4-202ENST00000398738 FAM236DA0A1B0GTK5 79 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 FAM236CP0DP71 79 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 RBM3P98179 157 aaKnown RBP6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 Q8NDZ9 215 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 C16orf74Q96GX8 76 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms