RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 C7orf65Q6ZTY9 151 aa13.95□□□□□ -0.18
KDM2A-202ENST00000398645 RPL28P46779 137 aaKnown RBP13.95□□□□□ -0.18
KDM2A-202ENST00000398645 SORL1Q92673 2214 aa13.95□□□□□ -0.18
KDM2A-202ENST00000398645 IGLV1-40P01703 118 aa13.95□□□□□ -0.18
KDM2A-202ENST00000398645 FHL2Q14192 279 aa13.92□□□□□ -0.18
KDM2A-202ENST00000398645 ODF3L2Q3SX64 289 aa13.92□□□□□ -0.18
KDM2A-202ENST00000398645 LINC00474Q9P2X8 69 aa13.91□□□□□ -0.18
KDM2A-202ENST00000398645 KRTAP10-9P60411 292 aa13.91□□□□□ -0.18
KDM2A-202ENST00000398645 TMEM254Q8TBM7 123 aa13.89□□□□□ -0.19
KDM2A-202ENST00000398645 SERTAD4-AS1Q5TG53 156 aa13.88□□□□□ -0.19
KDM2A-202ENST00000398645 C1orf64Q8NEQ6 169 aa13.88□□□□□ -0.19
KDM2A-202ENST00000398645 COL4A4P53420 1690 aaPredicted RBP13.88□□□□□ -0.19
KDM2A-202ENST00000398645 Q6ZRU5 148 aa13.87□□□□□ -0.19
KDM2A-202ENST00000398645 SPAG11AQ6PDA7 123 aa13.86□□□□□ -0.19
KDM2A-202ENST00000398645 FSHBP01225 129 aa13.86□□□□□ -0.19
KDM2A-202ENST00000398645 EGFEM1PQ0D2K5 195 aa13.85□□□□□ -0.19
KDM2A-202ENST00000398645 C2orf48Q96LS8 159 aa13.84□□□□□ -0.19
KDM2A-202ENST00000398645 AGRNO00468 2067 aa13.83□□□□□ -0.2
KDM2A-202ENST00000398645 A0A096LNJ9 63 aa13.83□□□□□ -0.2
KDM2A-202ENST00000398645 KIAA0087Q14695 138 aa13.82□□□□□ -0.2
KDM2A-202ENST00000398645 TET2Q6N021 2002 aaPredicted RBP13.82□□□□□ -0.2
KDM2A-202ENST00000398645 LINC00337Q8N6G1 96 aa13.81□□□□□ -0.2
KDM2A-202ENST00000398645 COL5A1P20908 1838 aaPredicted RBP13.81□□□□□ -0.2
KDM2A-202ENST00000398645 SPACA4Q8TDM5 124 aa13.8□□□□□ -0.2
KDM2A-202ENST00000398645 CDIP1Q9H305 208 aa13.79□□□□□ -0.2
KDM2A-202ENST00000398645 PRRC2AP48634 2157 aaKnown RBP13.79□□□□□ -0.2
KDM2A-202ENST00000398645 A0A1B0GU69 56 aa13.79□□□□□ -0.2
KDM2A-202ENST00000398645 CNFNQ9BYD5 112 aa13.78□□□□□ -0.2
KDM2A-202ENST00000398645 ZFHX2Q9C0A1 2572 aaPredicted RBP13.78□□□□□ -0.2
KDM2A-202ENST00000398645 MUC7Q8TAX7 377 aa13.78□□□□□ -0.2
KDM2A-202ENST00000398645 SMCR5Q8TEV8 140 aa13.78□□□□□ -0.2
KDM2A-202ENST00000398645 CHTF8P0CG12 524 aa13.78□□□□□ -0.2
KDM2A-202ENST00000398645 LRP4O75096 1905 aa13.78□□□□□ -0.2
KDM2A-202ENST00000398645 PTPRSQ13332 1948 aa13.78□□□□□ -0.2
KDM2A-202ENST00000398645 RPL37AP61513 92 aaKnown RBP13.77□□□□□ -0.2
KDM2A-202ENST00000398645 LYPD5Q6UWN5 251 aa13.77□□□□□ -0.21
KDM2A-202ENST00000398645 AMELXQ99217 191 aa13.77□□□□□ -0.21
KDM2A-202ENST00000398645 CPAMD8Q8IZJ3 1885 aa13.76□□□□□ -0.21
KDM2A-202ENST00000398645 C22orf24Q9Y442 160 aa13.75□□□□□ -0.21
KDM2A-202ENST00000398645 MUC4Q99102 2169 aa13.75□□□□□ -0.21
KDM2A-202ENST00000398645 SPINT4Q6UDR6 99 aa13.74□□□□□ -0.21
KDM2A-202ENST00000398645 MOBPQ13875 183 aa13.73□□□□□ -0.21
KDM2A-202ENST00000398645 SPATA3Q8NHX4 192 aa13.71□□□□□ -0.21
KDM2A-202ENST00000398645 CREBBPQ92793 2442 aa13.71□□□□□ -0.21
KDM2A-202ENST00000398645 Q8N2B8 174 aa13.7□□□□□ -0.22
KDM2A-202ENST00000398645 LTBP2Q14767 1821 aa13.7□□□□□ -0.22
KDM2A-202ENST00000398645 FAM218AQ96MZ4 157 aa13.7□□□□□ -0.22
KDM2A-202ENST00000398645 C1orf134Q5TEV5 83 aa13.69□□□□□ -0.22
KDM2A-202ENST00000398645 PTPRQQ9UMZ3 2332 aa13.69□□□□□ -0.22
KDM2A-202ENST00000398645 FAM208BQ5VWN6 2430 aa13.68□□□□□ -0.22
KDM2A-202ENST00000398645 HIVEP2P31629 2446 aa13.68□□□□□ -0.22
KDM2A-202ENST00000398645 IGLV1-51P01701 117 aa13.67□□□□□ -0.22
KDM2A-202ENST00000398645 TECTAO75443 2155 aa13.66□□□□□ -0.22
KDM2A-202ENST00000398645 hDV103S1A0JD37 113 aa13.64□□□□□ -0.23
KDM2A-202ENST00000398645 PHF5AQ7RTV0 110 aaKnown RBP13.62□□□□□ -0.23
KDM2A-202ENST00000398645 C6orf48Q9UBA6 75 aa13.62□□□□□ -0.23
KDM2A-202ENST00000398645 CSPG4Q6UVK1 2322 aa13.62□□□□□ -0.23
KDM2A-202ENST00000398645 SMCPP49901 116 aaPredicted RBP13.62□□□□□ -0.23
KDM2A-202ENST00000398645 ADAMTS20P59510 1910 aa13.62□□□□□ -0.23
KDM2A-202ENST00000398645 ST20-AS1Q8NBB2 130 aa13.6□□□□□ -0.23
KDM2A-202ENST00000398645 PRO0628Q9UI54 55 aa13.6□□□□□ -0.23
KDM2A-202ENST00000398645 A0A1W2PPR1 153 aa13.59□□□□□ -0.23
KDM2A-202ENST00000398645 CXCL6P80162 114 aa13.59□□□□□ -0.23
KDM2A-202ENST00000398645 ATP11AUNQ6ZP68 121 aa13.59□□□□□ -0.23
KDM2A-202ENST00000398645 TM2D3Q9BRN9 247 aa13.58□□□□□ -0.24
KDM2A-202ENST00000398645 OTOGLQ3ZCN5 2332 aa13.57□□□□□ -0.24
KDM2A-202ENST00000398645 LINC00167Q96N53 147 aa13.57□□□□□ -0.24
KDM2A-202ENST00000398645 SSBP3-AS1Q7Z2R9 100 aa13.56□□□□□ -0.24
KDM2A-202ENST00000398645 LIMD2Q9BT23 127 aa13.56□□□□□ -0.24
KDM2A-202ENST00000398645 ACYP2P14621 99 aa13.55□□□□□ -0.24
KDM2A-202ENST00000398645 CUL9Q8IWT3 2517 aa13.54□□□□□ -0.24
KDM2A-202ENST00000398645 A0A1B0GUV1 79 aa13.51□□□□□ -0.25
KDM2A-202ENST00000398645 MDFIQ99750 246 aa13.51□□□□□ -0.25
KDM2A-202ENST00000398645 MUC22E2RYF6 1773 aaPredicted RBP13.5□□□□□ -0.25
KDM2A-202ENST00000398645 LINC00476Q8WZB0 136 aa13.48□□□□□ -0.25
KDM2A-202ENST00000398645 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
KDM2A-202ENST00000398645 Q96NJ1 140 aa13.47□□□□□ -0.25
KDM2A-202ENST00000398645 NAV3Q8IVL0 2385 aa13.47□□□□□ -0.25
KDM2A-202ENST00000398645 FAM168BA1KXE4 195 aa13.47□□□□□ -0.25
KDM2A-202ENST00000398645 FHL3Q13643 280 aa13.46□□□□□ -0.25
KDM2A-202ENST00000398645 PTPN13Q12923 2485 aa13.45□□□□□ -0.26
KDM2A-202ENST00000398645 HIVEP3Q5T1R4 2406 aa13.45□□□□□ -0.26
KDM2A-202ENST00000398645 LINC00313P59037 77 aa13.44□□□□□ -0.26
KDM2A-202ENST00000398645 C11orf72Q8NBR9 251 aa13.44□□□□□ -0.26
KDM2A-202ENST00000398645 Q6ZQT0 140 aa13.44□□□□□ -0.26
KDM2A-202ENST00000398645 PTPRBP23467 1997 aa13.43□□□□□ -0.26
KDM2A-202ENST00000398645 KIF25-AS1Q9Y6Z4 181 aa13.42□□□□□ -0.26
KDM2A-202ENST00000398645 APLNQ9ULZ1 77 aa13.42□□□□□ -0.26
KDM2A-202ENST00000398645 C8orf87E5RJ46 101 aa13.41□□□□□ -0.26
KDM2A-202ENST00000398645 EPM2AB3EWF7 344 aa13.41□□□□□ -0.26
KDM2A-202ENST00000398645 MUC6Q6W4X9 2439 aa13.41□□□□□ -0.26
KDM2A-202ENST00000398645 FAM19A4Q96LR4 140 aa13.4□□□□□ -0.26
KDM2A-202ENST00000398645 C16orf95Q9H693 158 aa13.4□□□□□ -0.26
KDM2A-202ENST00000398645 IGLV5-39A0A0G2JS06 123 aa13.39□□□□□ -0.27
KDM2A-202ENST00000398645 A8MUN3 132 aa13.39□□□□□ -0.27
KDM2A-202ENST00000398645 ELOF1P60002 83 aaKnown RBP13.38□□□□□ -0.27
KDM2A-202ENST00000398645 A0A0G2JQZ4 141 aa13.38□□□□□ -0.27
KDM2A-202ENST00000398645 A0A1W2PNN7 141 aa13.38□□□□□ -0.27
KDM2A-202ENST00000398645 NHLRC4P0CG21 123 aaPredicted RBP13.37□□□□□ -0.27
KDM2A-202ENST00000398645 IGHV3OR16-9A0A0B4J2B5 98 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms