RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 LINC00846Q9NV44 126 aa3.6□□□□□ -1.83
SSR1-202ENST00000397511 S100A7L2Q5SY68 101 aa3.6□□□□□ -1.83
SSR1-202ENST00000397511 Q8N2B8 174 aa3.6□□□□□ -1.83
SSR1-202ENST00000397511 Q9HAA7 133 aa3.6□□□□□ -1.83
SSR1-202ENST00000397511 XCL1P47992 114 aa3.59□□□□□ -1.83
SSR1-202ENST00000397511 FAM104AQ969W3 186 aa3.59□□□□□ -1.83
SSR1-202ENST00000397511 FAM218AQ96MZ4 157 aa3.59□□□□□ -1.83
SSR1-202ENST00000397511 DSCR9P59020 149 aa3.59□□□□□ -1.83
SSR1-202ENST00000397511 ATP5EP2Q5VTU8 51 aa3.59□□□□□ -1.83
SSR1-202ENST00000397511 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.59□□□□□ -1.83
SSR1-202ENST00000397511 CDKN2A-AS1Q9UH64 79 aa3.59□□□□□ -1.83
SSR1-202ENST00000397511 TENM1Q9UKZ4 2725 aa3.59□□□□□ -1.84
SSR1-202ENST00000397511 Q6ZTI0 123 aa3.59□□□□□ -1.84
SSR1-202ENST00000397511 BRK1Q8WUW1 75 aa3.59□□□□□ -1.84
SSR1-202ENST00000397511 TRAV23DV6A0A075B6W5 121 aa3.58□□□□□ -1.84
SSR1-202ENST00000397511 COX6A2Q02221 97 aa3.58□□□□□ -1.84
SSR1-202ENST00000397511 DEFB114Q30KQ6 69 aa3.58□□□□□ -1.84
SSR1-202ENST00000397511 DEFB113Q30KQ7 82 aa3.58□□□□□ -1.84
SSR1-202ENST00000397511 ODF3L2Q3SX64 289 aa3.58□□□□□ -1.84
SSR1-202ENST00000397511 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
SSR1-202ENST00000397511 ZNF843Q8N446 348 aa3.58□□□□□ -1.84
SSR1-202ENST00000397511 CHCHD7Q9BUK0 85 aa3.58□□□□□ -1.84
SSR1-202ENST00000397511 C16orf95Q9H693 158 aa3.58□□□□□ -1.84
SSR1-202ENST00000397511 NOP10Q9NPE3 64 aaKnown RBP3.58□□□□□ -1.84
SSR1-202ENST00000397511 OTOGQ6ZRI0 2925 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 PDZD2O15018 2839 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 TRAV13-2A0A0B4J235 113 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 LOC100131303A0A0U1RQF7 123 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 A0A0U1RQV1 116 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 INSP01308 110 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 RPL28P46779 137 aaKnown RBP3.57□□□□□ -1.84
SSR1-202ENST00000397511 OBSCN-AS1Q96MR7 158 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 Q9H8V8 135 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 ESM1Q9NQ30 184 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 UNC79Q9P2D8 2635 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 ATRQ13535 2644 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 H7BZZ5 65 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 CRPP02741 224 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 HILS1P60008 231 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 CD164L2Q6UWJ8 174 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 C11orf72Q8NBR9 251 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 DNAJC9-AS1A6NH13 148 aa3.57□□□□□ -1.84
SSR1-202ENST00000397511 TRGV2A0A075B6R0 118 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 CCL24O00175 119 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 SOSTDC1Q6X4U4 206 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 FP248Q71RG6 208 aaPredicted RBP3.56□□□□□ -1.84
SSR1-202ENST00000397511 C1orf158Q8N1D5 194 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 C4orf3Q8WVX3 66 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 SMR3AQ99954 134 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 TOMM7Q9P0U1 55 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 TRAV7A0A075B6U4 112 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 A0A096LPF7 62 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 H0YGX0 51 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 BCE1O60756 84 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 RBM3P98179 157 aaKnown RBP3.56□□□□□ -1.84
SSR1-202ENST00000397511 LCE2CQ5TA81 110 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 SERTAD4-AS1Q5TG53 156 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 FAM19A1Q7Z5A9 133 aa3.56□□□□□ -1.84
SSR1-202ENST00000397511 C11orf68Q9H3H3 251 aaKnown RBP3.56□□□□□ -1.84
SSR1-202ENST00000397511 TRBV10-3A0A0K0K1G6 114 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 NCR3O14931 201 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 CCKP06307 115 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 C9orf129Q5T035 196 aaKnown RBP3.55□□□□□ -1.84
SSR1-202ENST00000397511 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
SSR1-202ENST00000397511 A0A087WYN8 130 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 FSHBP01225 129 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 DEFB130BP0DP73 79 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 DEFB130AP0DP74 79 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 ATP5EP56381 51 aaPredicted RBP3.55□□□□□ -1.84
SSR1-202ENST00000397511 KLKP1Q107X0 134 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 ENHOQ6UWT2 76 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 WFDC9Q8NEX5 89 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 IGLV5-45A0A087WSX0 123 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 TRBV7-6A0A0J9YX20 115 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 PIK3CD-AS1Q5SR53 167 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 X6R8D5 127 aa3.55□□□□□ -1.84
SSR1-202ENST00000397511 VPREB1P12018 145 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 CLPSL2Q6UWE3 100 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 LYPD5Q6UWN5 251 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 UBL5Q9BZL1 73 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 IGLV5-39A0A0G2JS06 123 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 F8WEM9 126 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 UBE2L6O14933 153 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 NDUFC1O43677 76 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 RPL36AP83881 106 aaKnown RBP3.54□□□□□ -1.84
SSR1-202ENST00000397511 LINC00242Q5T6M2 205 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 KRTAP1-3Q8IUG1 177 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 RPL36ALQ969Q0 106 aaKnown RBP3.54□□□□□ -1.84
SSR1-202ENST00000397511 ORMDL1Q9P0S3 153 aa3.54□□□□□ -1.84
SSR1-202ENST00000397511 TEP1Q99973 2627 aaKnown RBP3.54□□□□□ -1.84
SSR1-202ENST00000397511 PKD1L1Q8TDX9 2849 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 JMJD7-PLA2G4BH0Y9G9 81 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 LECT2O14960 151 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 DEFB4AO15263 64 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 LINC00474Q9P2X8 69 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 HIVEP1P15822 2718 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 TRGV4A0A0C4DH28 118 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 K7EQD1 137 aa3.53□□□□□ -1.84
SSR1-202ENST00000397511 MIR7-3HGQ8N6C7 128 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms