RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 I3L3M4 83 aa5.51□□□□□ -1.53
LDHC-202ENST00000396215 CKS1BP61024 79 aa5.51□□□□□ -1.53
LDHC-202ENST00000396215 MT1HP80294 61 aa5.51□□□□□ -1.53
LDHC-202ENST00000396215 RHEBQ15382 184 aa5.51□□□□□ -1.53
LDHC-202ENST00000396215 BOD1L2Q8IYS8 172 aa5.51□□□□□ -1.53
LDHC-202ENST00000396215 MRAP2Q96G30 205 aa5.51□□□□□ -1.53
LDHC-202ENST00000396215 CNFNQ9BYD5 112 aa5.51□□□□□ -1.53
LDHC-202ENST00000396215 CST9LQ9H4G1 147 aa5.51□□□□□ -1.53
LDHC-202ENST00000396215 MAP1LC3B2A6NCE7 125 aa5.5□□□□□ -1.53
LDHC-202ENST00000396215 NDUFA1O15239 70 aa5.5□□□□□ -1.53
LDHC-202ENST00000396215 SEC61GP60059 68 aa5.5□□□□□ -1.53
LDHC-202ENST00000396215 SEC61BP60468 96 aaKnown RBP5.5□□□□□ -1.53
LDHC-202ENST00000396215 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
LDHC-202ENST00000396215 FAM229BQ4G0N7 80 aa5.5□□□□□ -1.53
LDHC-202ENST00000396215 LYZL1Q6UWQ5 148 aa5.5□□□□□ -1.53
LDHC-202ENST00000396215 RPL39LQ96EH5 51 aaKnown RBP5.5□□□□□ -1.53
LDHC-202ENST00000396215 SIGMAR1Q99720 223 aa5.5□□□□□ -1.53
LDHC-202ENST00000396215 MAP1LC3BQ9GZQ8 125 aa5.5□□□□□ -1.53
LDHC-202ENST00000396215 CSDC2Q9Y534 153 aaKnown RBP5.5□□□□□ -1.53
LDHC-202ENST00000396215 TRBV6-5A0A0K0K1A5 114 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 HMSDA8MTL9 139 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 PAGE4O60829 102 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 RPL32P62910 135 aaKnown RBP5.49□□□□□ -1.53
LDHC-202ENST00000396215 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 GAGE2EQ4V326 116 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 C10orf25Q5T742 122 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 FP248Q71RG6 208 aaPredicted RBP5.49□□□□□ -1.53
LDHC-202ENST00000396215 C5orf38Q86SI9 138 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 MAP1LC3CQ9BXW4 147 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 CTDSP1Q9GZU7 261 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 GAGE2DQ9UEU5 116 aa5.49□□□□□ -1.53
LDHC-202ENST00000396215 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
LDHC-202ENST00000396215 IFNA1P01562 189 aa5.48□□□□□ -1.53
LDHC-202ENST00000396215 PMCHP20382 165 aa5.48□□□□□ -1.53
LDHC-202ENST00000396215 CTRLP40313 264 aa5.48□□□□□ -1.53
LDHC-202ENST00000396215 RPL28P46779 137 aaKnown RBP5.48□□□□□ -1.53
LDHC-202ENST00000396215 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
LDHC-202ENST00000396215 LINC00337Q8N6G1 96 aa5.48□□□□□ -1.53
LDHC-202ENST00000396215 CYTL1Q9NRR1 136 aa5.48□□□□□ -1.53
LDHC-202ENST00000396215 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
LDHC-202ENST00000396215 BORCS7-ASMTA0A0B4J1R7 106 aa5.47□□□□□ -1.53
LDHC-202ENST00000396215 PPP1R2P9O14990 202 aa5.47□□□□□ -1.53
LDHC-202ENST00000396215 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
LDHC-202ENST00000396215 C9orf129Q5T035 196 aaKnown RBP5.47□□□□□ -1.53
LDHC-202ENST00000396215 RPL7L1Q6DKI1 246 aaKnown RBP5.47□□□□□ -1.53
LDHC-202ENST00000396215 UNQ6190/PRO20217Q6UXQ8 127 aa5.47□□□□□ -1.53
LDHC-202ENST00000396215 ANAPC11Q9NYG5 84 aa5.47□□□□□ -1.53
LDHC-202ENST00000396215 NAT8Q9UHE5 227 aa5.47□□□□□ -1.53
LDHC-202ENST00000396215 TWIST1Q15672 202 aa5.46□□□□□ -1.54
LDHC-202ENST00000396215 OCC1Q8TAD7 63 aa5.46□□□□□ -1.54
LDHC-202ENST00000396215 MIEN1Q9BRT3 115 aa5.46□□□□□ -1.54
LDHC-202ENST00000396215 TMEM126AQ9H061 195 aa5.46□□□□□ -1.54
LDHC-202ENST00000396215 TRAV13-1A0A0B4J241 112 aa5.45□□□□□ -1.54
LDHC-202ENST00000396215 IGHV3OR16-9A0A0B4J2B5 98 aa5.45□□□□□ -1.54
LDHC-202ENST00000396215 TRBV27A0A0K0K1C4 114 aa5.45□□□□□ -1.54
LDHC-202ENST00000396215 C7orf77A4D0Y5 90 aa5.45□□□□□ -1.54
LDHC-202ENST00000396215 NDUFC2-KCTD14E9PQ53 114 aa5.45□□□□□ -1.54
LDHC-202ENST00000396215 BCE1O60756 84 aa5.45□□□□□ -1.54
LDHC-202ENST00000396215 RAB5AP20339 215 aa5.45□□□□□ -1.54
LDHC-202ENST00000396215 POLR2KP53803 58 aaKnown RBP5.45□□□□□ -1.54
LDHC-202ENST00000396215 FA2HQ7L5A8 372 aa5.45□□□□□ -1.54
LDHC-202ENST00000396215 TMEM242Q9NWH2 141 aa5.45□□□□□ -1.54
LDHC-202ENST00000396215 USH2AO75445 5202 aa5.44□□□□□ -1.54
LDHC-202ENST00000396215 TRBV30A0A0K0K1B3 111 aa5.44□□□□□ -1.54
LDHC-202ENST00000396215 SMAGPQ0VAQ4 97 aa5.44□□□□□ -1.54
LDHC-202ENST00000396215 KIAA0087Q14695 138 aa5.44□□□□□ -1.54
LDHC-202ENST00000396215 RNASE7Q9H1E1 156 aaKnown RBP5.44□□□□□ -1.54
LDHC-202ENST00000396215 UBE2D4Q9Y2X8 147 aa5.44□□□□□ -1.54
LDHC-202ENST00000396215 C22orf24Q9Y442 160 aa5.44□□□□□ -1.54
LDHC-202ENST00000396215 J3QR89 54 aa5.43□□□□□ -1.54
LDHC-202ENST00000396215 RPS28P62857 69 aaKnown RBP5.43□□□□□ -1.54
LDHC-202ENST00000396215 COA6Q5JTJ3 125 aaKnown RBP5.43□□□□□ -1.54
LDHC-202ENST00000396215 KRTAP13-1Q8IUC0 172 aa5.43□□□□□ -1.54
LDHC-202ENST00000396215 MBD3L1Q8WWY6 194 aa5.43□□□□□ -1.54
LDHC-202ENST00000396215 C11orf52Q96A22 123 aa5.43□□□□□ -1.54
LDHC-202ENST00000396215 SPANXDQ9BXN6 97 aa5.43□□□□□ -1.54
LDHC-202ENST00000396215 ST20Q9HBF5 79 aa5.43□□□□□ -1.54
LDHC-202ENST00000396215 TP73-AS1Q9UF72 201 aa5.43□□□□□ -1.54
LDHC-202ENST00000396215 FOXA3P55318 350 aaPredicted RBP5.42□□□□□ -1.54
LDHC-202ENST00000396215 PMVKQ15126 192 aa5.42□□□□□ -1.54
LDHC-202ENST00000396215 CENPWQ5EE01 88 aa5.42□□□□□ -1.54
LDHC-202ENST00000396215 SPAG11AQ6PDA7 123 aa5.42□□□□□ -1.54
LDHC-202ENST00000396215 HIST3H2BBQ8N257 126 aa5.42□□□□□ -1.54
LDHC-202ENST00000396215 TIMM21Q9BVV7 248 aa5.42□□□□□ -1.54
LDHC-202ENST00000396215 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
LDHC-202ENST00000396215 IGKV2D-26A0A0A0MRZ7 120 aa5.41□□□□□ -1.54
LDHC-202ENST00000396215 RPL24P83731 157 aaKnown RBP5.41□□□□□ -1.54
LDHC-202ENST00000396215 RNASE13Q5GAN3 156 aaKnown RBP5.41□□□□□ -1.54
LDHC-202ENST00000396215 IFITM10A6NMD0 228 aa5.4□□□□□ -1.54
LDHC-202ENST00000396215 HSBP1O75506 76 aa5.4□□□□□ -1.54
LDHC-202ENST00000396215 GIPP09681 153 aaPredicted RBP5.4□□□□□ -1.54
LDHC-202ENST00000396215 CCL20P78556 96 aa5.4□□□□□ -1.54
LDHC-202ENST00000396215 Q6ZUT4 128 aa5.4□□□□□ -1.54
LDHC-202ENST00000396215 PRO1933Q9H354 126 aa5.4□□□□□ -1.54
LDHC-202ENST00000396215 MRPL55Q7Z7F7 128 aaKnown RBP5.39□□□□□ -1.55
LDHC-202ENST00000396215 KCNRGQ8N5I3 272 aa5.39□□□□□ -1.55
LDHC-202ENST00000396215 OR13C6PQ8NH95 151 aa5.39□□□□□ -1.55
LDHC-202ENST00000396215 FAM104AQ969W3 186 aa5.39□□□□□ -1.55
LDHC-202ENST00000396215 HSPB8Q9UJY1 196 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms